RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C ARO9P38840 513 aaPredicted RBP3.4□□□□□ -1.87
SWC4YGR002C VPS27P40343 622 aaKnown RBP3.4□□□□□ -1.87
SWC4YGR002C NOP2P40991 618 aaKnown RBP3.4□□□□□ -1.87
SWC4YGR002C ATG36P46983 293 aa3.4□□□□□ -1.87
SWC4YGR002C ESF2P53743 316 aaKnown RBP3.4□□□□□ -1.87
SWC4YGR002C YNL092WP53934 400 aa3.4□□□□□ -1.87
SWC4YGR002C CRT10Q08226 957 aa3.4□□□□□ -1.87
SWC4YGR002C OSW1Q08692 278 aa3.4□□□□□ -1.87
SWC4YGR002C AHA1Q12449 350 aaKnown RBP3.4□□□□□ -1.87
SWC4YGR002C YER175W-AQ8TGU4 54 aa3.4□□□□□ -1.87
SWC4YGR002C ADE3P07245 946 aaKnown RBP3.39□□□□□ -1.87
SWC4YGR002C AQY1P0CD91 305 aa3.39□□□□□ -1.87
SWC4YGR002C PGI1P12709 554 aaKnown RBP3.39□□□□□ -1.87
SWC4YGR002C APA1P16550 321 aaKnown RBP3.39□□□□□ -1.87
SWC4YGR002C AMD2P22580 549 aa3.39□□□□□ -1.87
SWC4YGR002C FRD1P32614 470 aaKnown RBP3.39□□□□□ -1.87
SWC4YGR002C SPC72P39723 622 aa3.39□□□□□ -1.87
SWC4YGR002C CAB2P40506 365 aa3.39□□□□□ -1.87
SWC4YGR002C UBX4P54730 416 aa3.39□□□□□ -1.87
SWC4YGR002C UBP16Q02863 499 aa3.39□□□□□ -1.87
SWC4YGR002C AIM6Q07716 390 aa3.39□□□□□ -1.87
SWC4YGR002C AI5_ALPHAQ9ZZX1 630 aa3.39□□□□□ -1.87
SWC4YGR002C MCM3P24279 971 aaKnown RBP3.38□□□□□ -1.87
SWC4YGR002C MPP10P47083 593 aaKnown RBP3.38□□□□□ -1.87
SWC4YGR002C CWC22P53333 577 aaKnown RBP3.38□□□□□ -1.87
SWC4YGR002C ARA2Q04212 335 aa3.38□□□□□ -1.87
SWC4YGR002C YML053CQ04978 212 aa3.38□□□□□ -1.87
SWC4YGR002C IWR1Q07532 353 aaPredicted RBP3.38□□□□□ -1.87
SWC4YGR002C YMR084WA2P2R3 262 aa3.37□□□□□ -1.87
SWC4YGR002C NUP1P20676 1076 aa3.37□□□□□ -1.87
SWC4YGR002C RPC34P32910 317 aa3.37□□□□□ -1.87
SWC4YGR002C HOT13P36078 116 aa3.37□□□□□ -1.87
SWC4YGR002C OPT1P40897 799 aa3.37□□□□□ -1.87
SWC4YGR002C COG2P53271 262 aa3.37□□□□□ -1.87
SWC4YGR002C CPR6P53691 371 aaKnown RBP3.37□□□□□ -1.87
SWC4YGR002C RIM13Q03792 727 aa3.37□□□□□ -1.87
SWC4YGR002C RAD33Q04231 177 aa3.37□□□□□ -1.87
SWC4YGR002C EIS1Q05050 843 aaKnown RBP3.37□□□□□ -1.87
SWC4YGR002C MIS1P09440 975 aaKnown RBP3.36□□□□□ -1.87
SWC4YGR002C MFT1P33441 392 aaKnown RBP3.36□□□□□ -1.87
SWC4YGR002C EXO1P39875 702 aa3.36□□□□□ -1.87
SWC4YGR002C ACA1P39970 489 aa3.36□□□□□ -1.87
SWC4YGR002C MAM1P40065 302 aa3.36□□□□□ -1.87
SWC4YGR002C RPT2P40327 437 aaKnown RBP3.36□□□□□ -1.87
SWC4YGR002C PAP2P53632 584 aaKnown RBP3.36□□□□□ -1.87
SWC4YGR002C YDL242WQ07746 117 aa3.36□□□□□ -1.87
SWC4YGR002C CHO2P05374 869 aaKnown RBP3.36□□□□□ -1.87
SWC4YGR002C RNA1P11745 407 aaKnown RBP3.36□□□□□ -1.87
SWC4YGR002C RRP43P25359 394 aaPredicted RBP3.36□□□□□ -1.87
SWC4YGR002C YJU2P28320 278 aaPredicted RBP3.36□□□□□ -1.87
SWC4YGR002C YBR138CP38277 524 aa3.36□□□□□ -1.87
SWC4YGR002C VPS8P39702 1274 aa3.36□□□□□ -1.87
SWC4YGR002C SAP1P39955 897 aaKnown RBP3.36□□□□□ -1.87
SWC4YGR002C PUG1P40100 303 aa3.36□□□□□ -1.87
SWC4YGR002C LAS21P40367 830 aa3.36□□□□□ -1.87
SWC4YGR002C TDA10P42938 290 aa3.36□□□□□ -1.87
SWC4YGR002C TAM41P53230 385 aa3.36□□□□□ -1.87
SWC4YGR002C AAT1Q01802 451 aa3.36□□□□□ -1.87
SWC4YGR002C YPL108WQ02872 168 aaPredicted RBP3.36□□□□□ -1.87
SWC4YGR002C ATG21Q02887 496 aa3.36□□□□□ -1.87
SWC4YGR002C CYK3Q07533 885 aa3.36□□□□□ -1.87
SWC4YGR002C Q0010Q9ZZX9 128 aa3.36□□□□□ -1.87
SWC4YGR002C HSC82P15108 705 aaKnown RBP3.35□□□□□ -1.87
SWC4YGR002C PDE1P22434 369 aa3.35□□□□□ -1.87
SWC4YGR002C CLB4P24871 460 aa3.35□□□□□ -1.87
SWC4YGR002C ARP2P32381 391 aaKnown RBP3.35□□□□□ -1.87
SWC4YGR002C SIP1P32578 815 aa3.35□□□□□ -1.87
SWC4YGR002C ERR3P42222 437 aa3.35□□□□□ -1.87
SWC4YGR002C SEG1Q04279 960 aa3.35□□□□□ -1.87
SWC4YGR002C PLM2Q04383 521 aa3.35□□□□□ -1.87
SWC4YGR002C AFT2Q08957 416 aa3.35□□□□□ -1.87
SWC4YGR002C LCB4Q12246 624 aa3.35□□□□□ -1.87
SWC4YGR002C PET122P10355 254 aa3.34□□□□□ -1.88
SWC4YGR002C MSM1P22438 575 aa3.34□□□□□ -1.88
SWC4YGR002C ATP23P53722 227 aa3.34□□□□□ -1.88
SWC4YGR002C HRD3Q05787 833 aa3.34□□□□□ -1.88
SWC4YGR002C ORM2Q06144 216 aa3.34□□□□□ -1.88
SWC4YGR002C SUL2Q12325 893 aa3.34□□□□□ -1.88
SWC4YGR002C PNO1Q99216 274 aaKnown RBP3.34□□□□□ -1.88
SWC4YGR002C RTC1Q08281 1341 aa3.33□□□□□ -1.88
SWC4YGR002C NCP1P16603 691 aaKnown RBP3.33□□□□□ -1.88
SWC4YGR002C PTP1P25044 335 aa3.33□□□□□ -1.88
SWC4YGR002C GSY2P27472 705 aa3.33□□□□□ -1.88
SWC4YGR002C SWC3P31376 625 aa3.33□□□□□ -1.88
SWC4YGR002C DBF20P32328 564 aa3.33□□□□□ -1.88
SWC4YGR002C ERC1P38767 581 aa3.33□□□□□ -1.88
SWC4YGR002C XBP1P40489 647 aa3.33□□□□□ -1.88
SWC4YGR002C FAF1P40546 346 aaPredicted RBP3.33□□□□□ -1.88
SWC4YGR002C SAE2P46946 345 aa3.33□□□□□ -1.88
SWC4YGR002C ZAP1P47043 880 aa3.33□□□□□ -1.88
SWC4YGR002C IMA1P53051 589 aa3.33□□□□□ -1.88
SWC4YGR002C ATG16Q03818 150 aa3.33□□□□□ -1.88
SWC4YGR002C STP3Q05937 343 aa3.33□□□□□ -1.88
SWC4YGR002C BLS1Q06071 122 aa3.33□□□□□ -1.88
SWC4YGR002C RDL1Q12305 139 aaKnown RBP3.33□□□□□ -1.88
SWC4YGR002C QCR6P00127 147 aa3.32□□□□□ -1.88
SWC4YGR002C BI2P03873 423 aa3.32□□□□□ -1.88
SWC4YGR002C APN1P22936 367 aa3.32□□□□□ -1.88
SWC4YGR002C MBR1P23493 339 aa3.32□□□□□ -1.88
SWC4YGR002C GCD7P32502 381 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms