RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C GCS1P35197 352 aa13.15□□□□□ -0.3
PHO4YFR034C YJL206CP39529 758 aa13.15□□□□□ -0.3
PHO4YFR034C FIR1P40020 876 aa13.15□□□□□ -0.3
PHO4YFR034C COP1P53622 1201 aaKnown RBP13.15□□□□□ -0.3
PHO4YFR034C ENT5Q03769 411 aaKnown RBP13.15□□□□□ -0.3
PHO4YFR034C SPC24Q04477 213 aa13.15□□□□□ -0.3
PHO4YFR034C MRI1Q06489 411 aaKnown RBP13.15□□□□□ -0.3
PHO4YFR034C SVS1Q12254 260 aa13.15□□□□□ -0.3
PHO4YFR034C LDB17Q12342 491 aa13.15□□□□□ -0.3
PHO4YFR034C KCS1Q12494 1050 aa13.15□□□□□ -0.3
PHO4YFR034C DAL1P32375 460 aa13.14□□□□□ -0.31
PHO4YFR034C MVD1P32377 396 aaKnown RBP13.14□□□□□ -0.31
PHO4YFR034C FUI1P38196 639 aa13.14□□□□□ -0.31
PHO4YFR034C PEP8P40335 379 aa13.14□□□□□ -0.31
PHO4YFR034C SNG1P46950 547 aa13.14□□□□□ -0.31
PHO4YFR034C RCF2P53721 224 aa13.14□□□□□ -0.31
PHO4YFR034C GTR1Q00582 310 aa13.14□□□□□ -0.31
PHO4YFR034C MRN1Q08925 612 aaKnown RBP RIP-Chip data13.14□□□□□ -0.31not detected
PHO4YFR034C LCB4Q12246 624 aa13.14□□□□□ -0.31
PHO4YFR034C MAS1P10507 462 aa13.13□□□□□ -0.31
PHO4YFR034C RPC19P28000 142 aaKnown RBP13.13□□□□□ -0.31
PHO4YFR034C MRS6P32864 603 aaKnown RBP13.13□□□□□ -0.31
PHO4YFR034C SRP101P32916 621 aa13.13□□□□□ -0.31
PHO4YFR034C RRP14P36080 434 aaKnown RBP13.13□□□□□ -0.31
PHO4YFR034C MED8P38304 223 aa13.13□□□□□ -0.31
PHO4YFR034C CRP1P38845 465 aaKnown RBP13.13□□□□□ -0.31
PHO4YFR034C YFL052WP43551 465 aa13.13□□□□□ -0.31
PHO4YFR034C ROK1P45818 564 aaPredicted RBP13.13□□□□□ -0.31
PHO4YFR034C RTT101P47050 842 aa13.13□□□□□ -0.31
PHO4YFR034C INP2Q03824 705 aa13.13□□□□□ -0.31
PHO4YFR034C CDC123Q05791 360 aa13.13□□□□□ -0.31
PHO4YFR034C INO1P11986 533 aa13.12□□□□□ -0.31
PHO4YFR034C APE1P14904 514 aa13.12□□□□□ -0.31
PHO4YFR034C OXP1P28273 1286 aa13.12□□□□□ -0.31
PHO4YFR034C RIM1P32445 135 aaKnown RBP13.12□□□□□ -0.31
PHO4YFR034C YKR051WP36142 418 aa13.12□□□□□ -0.31
PHO4YFR034C ECM13P38195 257 aa13.12□□□□□ -0.31
PHO4YFR034C KAP104P38217 918 aaKnown RBP13.12□□□□□ -0.31
PHO4YFR034C YBR225WP38321 900 aa13.12□□□□□ -0.31
PHO4YFR034C URA8P38627 578 aaPredicted RBP13.12□□□□□ -0.31
PHO4YFR034C ERP5P38819 212 aa13.12□□□□□ -0.31
PHO4YFR034C YFL040WP43562 540 aa13.12□□□□□ -0.31
PHO4YFR034C YNL035CP53962 389 aaKnown RBP13.12□□□□□ -0.31
PHO4YFR034C MET14Q02196 202 aa13.12□□□□□ -0.31
PHO4YFR034C RLI1Q03195 608 aaKnown RBP13.12□□□□□ -0.31
PHO4YFR034C HER2Q03557 464 aa13.12□□□□□ -0.31
PHO4YFR034C SWC7Q06707 132 aa13.12□□□□□ -0.31
PHO4YFR034C ADY3Q07732 790 aa13.12□□□□□ -0.31
PHO4YFR034C SLD7Q08457 257 aa13.12□□□□□ -0.31
PHO4YFR034C RAD3P06839 778 aa13.11□□□□□ -0.31
PHO4YFR034C RNA1P11745 407 aaKnown RBP13.11□□□□□ -0.31
PHO4YFR034C GAL11P19659 1081 aa13.11□□□□□ -0.31
PHO4YFR034C PGS1P25578 521 aa13.11□□□□□ -0.31
PHO4YFR034C PAT1P25644 796 aaKnown RBP13.11□□□□□ -0.31
PHO4YFR034C TSA1P34760 196 aaKnown RBP13.11□□□□□ -0.31
PHO4YFR034C CDC27P38042 758 aa13.11□□□□□ -0.31
PHO4YFR034C RDH54P38086 958 aa13.11□□□□□ -0.31
PHO4YFR034C RFS1P38234 210 aaKnown RBP13.11□□□□□ -0.31
PHO4YFR034C FAR3P46671 204 aa13.11□□□□□ -0.31
PHO4YFR034C CCT8P47079 568 aaKnown RBP13.11□□□□□ -0.31
PHO4YFR034C YPL109CQ02981 657 aa13.11□□□□□ -0.31
PHO4YFR034C GCN5Q03330 439 aa13.11□□□□□ -0.31
PHO4YFR034C YMR209CQ03648 457 aa13.11□□□□□ -0.31
PHO4YFR034C RSC2Q06488 889 aa13.11□□□□□ -0.31
PHO4YFR034C RGS2Q99188 309 aa13.11□□□□□ -0.31
PHO4YFR034C AFI1Q99222 893 aa13.11□□□□□ -0.31
PHO4YFR034C PRC1P00729 532 aa13.1□□□□□ -0.31
PHO4YFR034C SEC14P24280 304 aaKnown RBP13.1□□□□□ -0.31
PHO4YFR034C HEM3P28789 327 aa13.1□□□□□ -0.31
PHO4YFR034C HRR25P29295 494 aaKnown RBP13.1□□□□□ -0.31
PHO4YFR034C GDA1P32621 518 aa13.1□□□□□ -0.31
PHO4YFR034C TOA1P32773 286 aa13.1□□□□□ -0.31
PHO4YFR034C YSC84P32793 468 aa13.1□□□□□ -0.31
PHO4YFR034C RFC3P38629 340 aa13.1□□□□□ -0.31
PHO4YFR034C SRP68P38687 599 aaKnown RBP13.1□□□□□ -0.31
PHO4YFR034C MRX6P48564 524 aa13.1□□□□□ -0.31
PHO4YFR034C GND2P53319 492 aa13.1□□□□□ -0.31
PHO4YFR034C YNL058CP53947 316 aa13.1□□□□□ -0.31
PHO4YFR034C SIW14P53965 281 aa13.1□□□□□ -0.31
PHO4YFR034C TAF11Q04226 346 aa13.1□□□□□ -0.31
PHO4YFR034C ALR1Q08269 859 aa13.1□□□□□ -0.31
PHO4YFR034C NOT5Q12514 560 aaPredicted RBP13.1□□□□□ -0.31
PHO4YFR034C COX5AP00424 153 aa13.09□□□□□ -0.31
PHO4YFR034C GCY1P14065 312 aaKnown RBP RIP-Chip data13.09□□□□□ -0.31not detected
PHO4YFR034C BEM3P32873 1128 aa13.09□□□□□ -0.31
PHO4YFR034C PHO89P38361 574 aa13.09□□□□□ -0.31
PHO4YFR034C TAN1P53072 289 aaPredicted RBP13.09□□□□□ -0.31
PHO4YFR034C PNG1Q02890 363 aa13.09□□□□□ -0.31
PHO4YFR034C PIR3Q03180 325 aa13.09□□□□□ -0.31
PHO4YFR034C NHX1Q04121 633 aa13.09□□□□□ -0.31
PHO4YFR034C YLR177WQ06251 628 aa13.09□□□□□ -0.31
PHO4YFR034C ENO2P00925 437 aaKnown RBP13.08□□□□□ -0.32
PHO4YFR034C ERG20P08524 352 aaKnown RBP13.08□□□□□ -0.32
PHO4YFR034C AMD2P22580 549 aa13.08□□□□□ -0.32
PHO4YFR034C RAD27P26793 382 aa13.08□□□□□ -0.32
PHO4YFR034C PHA2P32452 334 aa13.08□□□□□ -0.32
PHO4YFR034C RIM2P38127 377 aa13.08□□□□□ -0.32
PHO4YFR034C CHS6P40955 746 aa13.08□□□□□ -0.32
PHO4YFR034C DLD2P46681 530 aaKnown RBP13.08□□□□□ -0.32
PHO4YFR034C BFA1P47113 574 aa13.08□□□□□ -0.32
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms