RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM4	YER112W	YER175W-A	Q8TGU4	54 aa		4.21	□□□□□ -1.74
LSM4	YER112W	POL3	P15436	1097 aa		4.2	□□□□□ -1.74
LSM4	YER112W	MCM3	P24279	971 aa	Known RBP	4.2	□□□□□ -1.74
LSM4	YER112W	AAD3	P25612	363 aa		4.2	□□□□□ -1.74
LSM4	YER112W	PRE2	P30656	287 aa	Known RBP	4.2	□□□□□ -1.74
LSM4	YER112W	FRD1	P32614	470 aa	Known RBP	4.2	□□□□□ -1.74
LSM4	YER112W	MOT3	P54785	490 aa	Known RBP	4.2	□□□□□ -1.74
LSM4	YER112W	YPL108W	Q02872	168 aa	Predicted RBP	4.2	□□□□□ -1.74
LSM4	YER112W	ATG21	Q02887	496 aa		4.2	□□□□□ -1.74
LSM4	YER112W	WAR1	Q03631	944 aa		4.2	□□□□□ -1.74
LSM4	YER112W	CRF1	Q04930	467 aa		4.2	□□□□□ -1.74
LSM4	YER112W	AIM6	Q07716	390 aa		4.2	□□□□□ -1.74
LSM4	YER112W	PGK1	P00560	416 aa	Known RBP	4.19	□□□□□ -1.74
LSM4	YER112W	LEU2	P04173	364 aa	Predicted RBP	4.19	□□□□□ -1.74
LSM4	YER112W	PDE1	P22434	369 aa		4.19	□□□□□ -1.74
LSM4	YER112W	RPC34	P32910	317 aa		4.19	□□□□□ -1.74
LSM4	YER112W	ACA1	P39970	489 aa		4.19	□□□□□ -1.74
LSM4	YER112W	COG2	P53271	262 aa		4.19	□□□□□ -1.74
LSM4	YER112W	ESF2	P53743	316 aa	Known RBP	4.19	□□□□□ -1.74
LSM4	YER112W	AAT1	Q01802	451 aa		4.19	□□□□□ -1.74
LSM4	YER112W	RGT2	Q12300	763 aa		4.19	□□□□□ -1.74
LSM4	YER112W	AHA1	Q12449	350 aa	Known RBP	4.19	□□□□□ -1.74
LSM4	YER112W	SEC18	P18759	758 aa	Known RBP	4.18	□□□□□ -1.74
LSM4	YER112W	KGD2	P19262	463 aa	Predicted RBP	4.18	□□□□□ -1.74
LSM4	YER112W	MSM1	P22438	575 aa		4.18	□□□□□ -1.74
LSM4	YER112W	RIT1	P23796	513 aa		4.18	□□□□□ -1.74
LSM4	YER112W	MTG2	P38860	518 aa		4.18	□□□□□ -1.74
LSM4	YER112W	SPC72	P39723	622 aa		4.18	□□□□□ -1.74
LSM4	YER112W	ARB1	P40024	610 aa	Known RBP	4.18	□□□□□ -1.74
LSM4	YER112W	YFL015C	P43578	164 aa		4.18	□□□□□ -1.74
LSM4	YER112W	IMA1	P53051	589 aa		4.18	□□□□□ -1.74
LSM4	YER112W	CHO2	P05374	869 aa	Known RBP	4.17	□□□□□ -1.74
LSM4	YER112W	ERG11	P10614	530 aa		4.17	□□□□□ -1.74
LSM4	YER112W	PWP2	P25635	923 aa	Known RBP	4.17	□□□□□ -1.74
LSM4	YER112W	MRS6	P32864	603 aa	Known RBP	4.17	□□□□□ -1.74
LSM4	YER112W	VPS24	P36095	224 aa	Known RBP	4.17	□□□□□ -1.74
LSM4	YER112W	MRPL36	P36531	177 aa		4.17	□□□□□ -1.74
LSM4	YER112W	APD1	P38281	316 aa		4.17	□□□□□ -1.74
LSM4	YER112W	FSH1	P38777	243 aa	Known RBP	4.17	□□□□□ -1.74
LSM4	YER112W	YJL043W	P47053	257 aa		4.17	□□□□□ -1.74
LSM4	YER112W	ATG16	Q03818	150 aa		4.17	□□□□□ -1.74
LSM4	YER112W	IRC3	Q06683	689 aa		4.17	□□□□□ -1.74
LSM4	YER112W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
LSM4	YER112W	ADE3	P07245	946 aa	Known RBP	4.16	□□□□□ -1.74
LSM4	YER112W	GCD7	P32502	381 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM4	YER112W	GDA1	P32621	518 aa		4.16	□□□□□ -1.74
LSM4	YER112W	SKP2	P42843	763 aa		4.16	□□□□□ -1.74
LSM4	YER112W	TDA10	P42938	290 aa		4.16	□□□□□ -1.74
LSM4	YER112W	YNL092W	P53934	400 aa		4.16	□□□□□ -1.74
LSM4	YER112W	YNL058C	P53947	316 aa		4.16	□□□□□ -1.74
LSM4	YER112W	BLS1	Q06071	122 aa		4.16	□□□□□ -1.74
LSM4	YER112W	PCL8	Q08966	492 aa		4.16	□□□□□ -1.74
LSM4	YER112W	YBR255C-A	Q3E776	120 aa		4.16	□□□□□ -1.74
LSM4	YER112W	AI5_ALPHA	Q9ZZX1	630 aa		4.16	□□□□□ -1.74
LSM4	YER112W	PET122	P10355	254 aa		4.15	□□□□□ -1.75
LSM4	YER112W	BIK1	P11709	440 aa		4.15	□□□□□ -1.75
LSM4	YER112W	CLB4	P24871	460 aa		4.15	□□□□□ -1.75
LSM4	YER112W	DPB3	P27344	201 aa		4.15	□□□□□ -1.75
LSM4	YER112W	SIP1	P32578	815 aa		4.15	□□□□□ -1.75
LSM4	YER112W	RPF2	P36160	344 aa	Known RBP	4.15	□□□□□ -1.75
LSM4	YER112W	ARO9	P38840	513 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM4	YER112W	XBP1	P40489	647 aa		4.15	□□□□□ -1.75
LSM4	YER112W	SAP185	P40856	1058 aa		4.15	□□□□□ -1.75
LSM4	YER112W	CIR1	P42940	261 aa		4.15	□□□□□ -1.75
LSM4	YER112W	MPS1	P54199	764 aa		4.15	□□□□□ -1.75
LSM4	YER112W	UBP16	Q02863	499 aa		4.15	□□□□□ -1.75
LSM4	YER112W	TRS130	Q03660	1102 aa		4.15	□□□□□ -1.75
LSM4	YER112W	ORM2	Q06144	216 aa		4.15	□□□□□ -1.75
LSM4	YER112W	PSR2	Q07949	397 aa		4.15	□□□□□ -1.75
LSM4	YER112W	SEC3	P33332	1336 aa	Known RBP	4.15	□□□□□ -1.75
LSM4	YER112W	BI2	P03873	423 aa		4.14	□□□□□ -1.75
LSM4	YER112W	AMD2	P22580	549 aa		4.14	□□□□□ -1.75
LSM4	YER112W	SWI4	P25302	1093 aa	Known RBP	4.14	□□□□□ -1.75
LSM4	YER112W	GSY2	P27472	705 aa		4.14	□□□□□ -1.75
LSM4	YER112W	HOT13	P36078	116 aa		4.14	□□□□□ -1.75
LSM4	YER112W	NPR3	P38742	1146 aa		4.14	□□□□□ -1.75
LSM4	YER112W	PUG1	P40100	303 aa		4.14	□□□□□ -1.75
LSM4	YER112W	TAX4	P47030	604 aa		4.14	□□□□□ -1.75
LSM4	YER112W	YML119W	Q03208	357 aa		4.14	□□□□□ -1.75
LSM4	YER112W	RAD33	Q04231	177 aa		4.14	□□□□□ -1.75
LSM4	YER112W	PLM2	Q04383	521 aa		4.14	□□□□□ -1.75
LSM4	YER112W	YDL242W	Q07746	117 aa		4.14	□□□□□ -1.75
LSM4	YER112W	YPL191C	Q08930	360 aa		4.14	□□□□□ -1.75
LSM4	YER112W	ICL2	Q12031	575 aa		4.14	□□□□□ -1.75
LSM4	YER112W	LCB4	Q12246	624 aa		4.14	□□□□□ -1.75
LSM4	YER112W	APA1	P16550	321 aa	Known RBP	4.13	□□□□□ -1.75
LSM4	YER112W	YCL049C	P25577	312 aa		4.13	□□□□□ -1.75
LSM4	YER112W	YJU2	P28320	278 aa	Predicted RBP	4.13	□□□□□ -1.75
LSM4	YER112W	DBF20	P32328	564 aa		4.13	□□□□□ -1.75
LSM4	YER112W	ARP2	P32381	391 aa	Known RBP	4.13	□□□□□ -1.75
LSM4	YER112W	EXO1	P39875	702 aa		4.13	□□□□□ -1.75
LSM4	YER112W	STB2	P46679	850 aa		4.13	□□□□□ -1.75
LSM4	YER112W	AQY1	P0CD91	305 aa		4.12	□□□□□ -1.75
LSM4	YER112W	XRS2	P33301	854 aa		4.12	□□□□□ -1.75
LSM4	YER112W	FUN12	P39730	1002 aa	Known RBP	4.12	□□□□□ -1.75
LSM4	YER112W	IES5	P40060	125 aa		4.12	□□□□□ -1.75
LSM4	YER112W	RPT2	P40327	437 aa	Known RBP	4.12	□□□□□ -1.75
LSM4	YER112W	PSF2	P40359	213 aa		4.12	□□□□□ -1.75
LSM4	YER112W	BST1	P43571	1029 aa		4.12	□□□□□ -1.75
LSM4	YER112W	BPL1	P48445	690 aa	Predicted RBP	4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms