RNA–Protein interactions for RNA: YDR358W

GGA1, Transcript of Golgi-localized protein with homology to gamma-adaptin, yeast

Gene GGA1, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GGA1	YDR358W	SUL2	Q12325	893 aa		4.92	□□□□□ -1.62
GGA1	YDR358W	RTN2	Q12443	393 aa		4.92	□□□□□ -1.62
GGA1	YDR358W	TRM11	Q12463	433 aa		4.92	□□□□□ -1.62
GGA1	YDR358W	SUI3	P09064	285 aa	Known RBP	4.92	□□□□□ -1.62
GGA1	YDR358W	GAS1	P22146	559 aa	Known RBP	4.92	□□□□□ -1.62
GGA1	YDR358W	PEX1	P24004	1043 aa		4.92	□□□□□ -1.62
GGA1	YDR358W	KRR1	P25586	316 aa	Predicted RBP	4.92	□□□□□ -1.62
GGA1	YDR358W	PEP3	P27801	918 aa		4.92	□□□□□ -1.62
GGA1	YDR358W	SAS3	P34218	831 aa		4.92	□□□□□ -1.62
GGA1	YDR358W	SPO22	P40511	975 aa		4.92	□□□□□ -1.62
GGA1	YDR358W	GCV2	P49095	1034 aa		4.92	□□□□□ -1.62
GGA1	YDR358W	ATP22	P50273	684 aa	Predicted RBP	4.92	□□□□□ -1.62
GGA1	YDR358W	ASE1	P50275	885 aa		4.92	□□□□□ -1.62
GGA1	YDR358W	VPS62	P53285	467 aa		4.92	□□□□□ -1.62
GGA1	YDR358W	TEX1	P53851	422 aa	Known RBP	4.92	□□□□□ -1.62
GGA1	YDR358W	GCN5	Q03330	439 aa		4.92	□□□□□ -1.62
GGA1	YDR358W	ISA2	Q12425	185 aa		4.92	□□□□□ -1.62
GGA1	YDR358W	ERG27	Q12452	347 aa	Known RBP	4.92	□□□□□ -1.62
GGA1	YDR358W	ATP2	P00830	511 aa	Known RBP	4.91	□□□□□ -1.62
GGA1	YDR358W	ELM1	P32801	640 aa		4.91	□□□□□ -1.62
GGA1	YDR358W	AIM3	P38266	947 aa	Known RBP	4.91	□□□□□ -1.62
GGA1	YDR358W	TDP1	P38319	544 aa		4.91	□□□□□ -1.62
GGA1	YDR358W	YJL068C	P40363	299 aa		4.91	□□□□□ -1.62
GGA1	YDR358W	MRX6	P48564	524 aa		4.91	□□□□□ -1.62
GGA1	YDR358W	NNF2	P53253	936 aa		4.91	□□□□□ -1.62
GGA1	YDR358W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
GGA1	YDR358W	HMI1	Q12039	706 aa		4.91	□□□□□ -1.62
GGA1	YDR358W	HRP1	Q99383	534 aa	Known RBP	4.91	□□□□□ -1.62
GGA1	YDR358W	PMS1	P14242	873 aa		4.9	□□□□□ -1.62
GGA1	YDR358W	VPS33	P20795	691 aa		4.9	□□□□□ -1.62
GGA1	YDR358W	PWP1	P21304	576 aa	Known RBP	4.9	□□□□□ -1.62
GGA1	YDR358W	YCK1	P23291	538 aa		4.9	□□□□□ -1.62
GGA1	YDR358W	ERG6	P25087	383 aa	Known RBP	4.9	□□□□□ -1.62
GGA1	YDR358W	RNQ1	P25367	405 aa		4.9	□□□□□ -1.62
GGA1	YDR358W	THI80	P35202	319 aa		4.9	□□□□□ -1.62
GGA1	YDR358W	AAD10	P47182	288 aa		4.9	□□□□□ -1.62
GGA1	YDR358W	YGR250C	P53316	781 aa	Known RBP	4.9	□□□□□ -1.62
GGA1	YDR358W	ZDS2	P54786	942 aa		4.9	□□□□□ -1.62
GGA1	YDR358W	REG1	Q00816	1014 aa		4.9	□□□□□ -1.62
GGA1	YDR358W	RAD30	Q04049	632 aa		4.9	□□□□□ -1.62
GGA1	YDR358W	IRC3	Q06683	689 aa		4.9	□□□□□ -1.62
GGA1	YDR358W	ENT4	Q07872	247 aa		4.9	□□□□□ -1.62
GGA1	YDR358W	TGL5	Q12043	749 aa		4.9	□□□□□ -1.62
GGA1	YDR358W	TUP1	P16649	713 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	ORC2	P32833	620 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	EHT1	P38295	451 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	COS111	P38308	924 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	YJL193W	P39542	402 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	GET2	P40056	285 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	IDS2	P46958	469 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	MPP10	P47083	593 aa	Known RBP	4.89	□□□□□ -1.63
GGA1	YDR358W	BTN2	P53286	410 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	YNR061C	P53747	219 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	RMT2	Q03305	412 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	THI22	Q06490	572 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	LYS21	Q12122	440 aa	Known RBP	4.89	□□□□□ -1.63
GGA1	YDR358W	SOD2	P00447	233 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	RPS13	P05756	151 aa	Known RBP	4.89	□□□□□ -1.63
GGA1	YDR358W	TPM1	P17536	199 aa	Known RBP	4.89	□□□□□ -1.63
GGA1	YDR358W	ERG8	P24521	451 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	EMC1	P25574	760 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	CDC20	P26309	610 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	STB5	P38699	743 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	FMP10	P40098	244 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	AVT1	P47082	602 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	DSD1	P53095	428 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	SSL2	Q00578	843 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	CIK1	Q01649	594 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	YDR131C	Q03899	556 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	YFT2	Q06676	274 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	NOP12	Q08208	459 aa	Known RBP	4.89	□□□□□ -1.63
GGA1	YDR358W	TMA16	Q08687	178 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	NPC2	Q12408	173 aa		4.89	□□□□□ -1.63
GGA1	YDR358W	CBS1	P14066	229 aa		4.88	□□□□□ -1.63
GGA1	YDR358W	PRP6	P19735	899 aa	Predicted RBP	4.88	□□□□□ -1.63
GGA1	YDR358W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
GGA1	YDR358W	PRE2	P30656	287 aa	Known RBP	4.88	□□□□□ -1.63
GGA1	YDR358W	LRO1	P40345	661 aa		4.88	□□□□□ -1.63
GGA1	YDR358W	YIL161W	P40449	235 aa	Known RBP	4.88	□□□□□ -1.63
GGA1	YDR358W	COS12	P53053	380 aa		4.88	□□□□□ -1.63
GGA1	YDR358W	MUB1	Q03162	620 aa		4.88	□□□□□ -1.63
GGA1	YDR358W	CIR2	Q08822	631 aa		4.88	□□□□□ -1.63
GGA1	YDR358W	CYB2	P00175	591 aa		4.87	□□□□□ -1.63
GGA1	YDR358W	ILS1	P09436	1072 aa	Known RBP	4.87	□□□□□ -1.63
GGA1	YDR358W	NAT1	P12945	854 aa	Known RBP	4.87	□□□□□ -1.63
GGA1	YDR358W	VPS34	P22543	875 aa		4.87	□□□□□ -1.63
GGA1	YDR358W	DSS4	P32601	143 aa		4.87	□□□□□ -1.63
GGA1	YDR358W	ALY1	P36117	915 aa		4.87	□□□□□ -1.63
GGA1	YDR358W	RTS1	P38903	757 aa		4.87	□□□□□ -1.63
GGA1	YDR358W	PSD1	P39006	500 aa		4.87	□□□□□ -1.63
GGA1	YDR358W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
GGA1	YDR358W	SLZ1	P40167	298 aa		4.87	□□□□□ -1.63
GGA1	YDR358W	YIL077C	P40508	320 aa		4.87	□□□□□ -1.63
GGA1	YDR358W	RIM8	P53179	542 aa		4.87	□□□□□ -1.63
GGA1	YDR358W	SLU7	Q02775	382 aa	Known RBP	4.87	□□□□□ -1.63
GGA1	YDR358W	MTG1	Q03151	367 aa	Predicted RBP	4.87	□□□□□ -1.63
GGA1	YDR358W	YAP6	Q03935	383 aa		4.87	□□□□□ -1.63
GGA1	YDR358W	ARR3	Q06598	404 aa		4.87	□□□□□ -1.63
GGA1	YDR358W	PSR1	Q07800	427 aa		4.87	□□□□□ -1.63
GGA1	YDR358W	VCX1	Q99385	411 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 1506.9 ms