RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W NUP60P39705 539 aa2.88□□□□□ -1.95
VPS41YDR080W FMS1P50264 508 aa2.88□□□□□ -1.95
VPS41YDR080W NPY1P53164 384 aa2.88□□□□□ -1.95
VPS41YDR080W MDM1Q01846 1127 aa2.88□□□□□ -1.95
VPS41YDR080W MYO5Q04439 1219 aaKnown RBP2.88□□□□□ -1.95
VPS41YDR080W VPS13Q07878 3144 aa2.88□□□□□ -1.95
VPS41YDR080W HMG2P12684 1045 aa2.88□□□□□ -1.95
VPS41YDR080W SFL1P20134 766 aa2.88□□□□□ -1.95
VPS41YDR080W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
VPS41YDR080W RFC1P38630 861 aaKnown RBP2.88□□□□□ -1.95
VPS41YDR080W YIL092WP40497 633 aa2.88□□□□□ -1.95
VPS41YDR080W NOP9P47077 666 aaKnown RBP2.88□□□□□ -1.95
VPS41YDR080W RPS7BP48164 190 aaKnown RBP2.88□□□□□ -1.95
VPS41YDR080W UBA2P52488 636 aa2.88□□□□□ -1.95
VPS41YDR080W SPO1P53541 631 aa2.88□□□□□ -1.95
VPS41YDR080W BRE1Q07457 700 aaKnown RBP2.88□□□□□ -1.95
VPS41YDR080W TAF3Q12297 353 aa2.88□□□□□ -1.95
VPS41YDR080W NGG1P32494 702 aa2.88□□□□□ -1.95
VPS41YDR080W ANP1P32629 500 aa2.88□□□□□ -1.95
VPS41YDR080W RFS1P38234 210 aaKnown RBP2.88□□□□□ -1.95
VPS41YDR080W CCT3P39077 534 aaKnown RBP2.88□□□□□ -1.95
VPS41YDR080W VPS73P53142 486 aaKnown RBP2.88□□□□□ -1.95
VPS41YDR080W ALG12P53730 551 aa2.88□□□□□ -1.95
VPS41YDR080W RPT6Q01939 405 aaKnown RBP2.88□□□□□ -1.95
VPS41YDR080W GAD1Q04792 585 aa2.88□□□□□ -1.95
VPS41YDR080W HIF1Q12373 385 aa2.88□□□□□ -1.95
VPS41YDR080W PCD1Q12524 340 aa2.88□□□□□ -1.95
VPS41YDR080W SNF1P06782 633 aaKnown RBP2.87□□□□□ -1.95
VPS41YDR080W SRP54P20424 541 aaKnown RBP2.87□□□□□ -1.95
VPS41YDR080W PRO3P32263 286 aaKnown RBP2.87□□□□□ -1.95
VPS41YDR080W MSS1P32559 526 aaPredicted RBP2.87□□□□□ -1.95
VPS41YDR080W PHO11P35842 467 aa2.87□□□□□ -1.95
VPS41YDR080W DRE2P36152 348 aa2.87□□□□□ -1.95
VPS41YDR080W HSL7P38274 827 aa2.87□□□□□ -1.95
VPS41YDR080W PHO12P38693 467 aa2.87□□□□□ -1.95
VPS41YDR080W YMR147WP40218 223 aaKnown RBP2.87□□□□□ -1.95
VPS41YDR080W TAH11P47112 604 aa2.87□□□□□ -1.95
VPS41YDR080W CNM67P53865 581 aaKnown RBP2.87□□□□□ -1.95
VPS41YDR080W RCR2Q03446 210 aaKnown RBP2.87□□□□□ -1.95
VPS41YDR080W MCM21Q06675 368 aa2.87□□□□□ -1.95
VPS41YDR080W NSE1Q07913 336 aa2.87□□□□□ -1.95
VPS41YDR080W YKL033W-AQ86ZR7 236 aa2.87□□□□□ -1.95
VPS41YDR080W PYC1P11154 1178 aaKnown RBP2.87□□□□□ -1.95
VPS41YDR080W RPL8AP17076 256 aaKnown RBP2.87□□□□□ -1.95
VPS41YDR080W THR1P17423 357 aaKnown RBP2.87□□□□□ -1.95
VPS41YDR080W RIT1P23796 513 aa2.87□□□□□ -1.95
VPS41YDR080W VPH1P32563 840 aaKnown RBP2.87□□□□□ -1.95
VPS41YDR080W SET3P36124 751 aa2.87□□□□□ -1.95
VPS41YDR080W PNG1Q02890 363 aa2.87□□□□□ -1.95
VPS41YDR080W GYL1Q04322 720 aa2.87□□□□□ -1.95
VPS41YDR080W SDH5Q08230 162 aa2.87□□□□□ -1.95
VPS41YDR080W RAD50P12753 1312 aa2.87□□□□□ -1.95
VPS41YDR080W ATP1P07251 545 aaKnown RBP2.86□□□□□ -1.95
VPS41YDR080W ADK2P26364 225 aa2.86□□□□□ -1.95
VPS41YDR080W HIS7P33734 552 aaKnown RBP2.86□□□□□ -1.95
VPS41YDR080W CRG1P38892 291 aaRIP-Chip data2.86□□□□□ -1.95not detected
VPS41YDR080W MGS1P40151 587 aa2.86□□□□□ -1.95
VPS41YDR080W FAF1P40546 346 aaPredicted RBP2.86□□□□□ -1.95
VPS41YDR080W RNH70P53331 553 aa2.86□□□□□ -1.95
VPS41YDR080W YML053CQ04978 212 aa2.86□□□□□ -1.95
VPS41YDR080W HBT1Q07653 1046 aaKnown RBP2.86□□□□□ -1.95
VPS41YDR080W PGK1P00560 416 aaKnown RBP2.86□□□□□ -1.95
VPS41YDR080W HOM2P13663 365 aaKnown RBP2.86□□□□□ -1.95
VPS41YDR080W PWP2P25635 923 aaKnown RBP2.86□□□□□ -1.95
VPS41YDR080W HMT1P38074 348 aa2.86□□□□□ -1.95
VPS41YDR080W TDP1P38319 544 aa2.86□□□□□ -1.95
VPS41YDR080W YHL026CP38740 315 aa2.86□□□□□ -1.95
VPS41YDR080W YJR039WP47107 1121 aa2.86□□□□□ -1.95
VPS41YDR080W ALT2P52892 507 aa2.86□□□□□ -1.95
VPS41YDR080W ZPR1P53303 486 aaKnown RBP2.86□□□□□ -1.95
VPS41YDR080W PHM6Q05637 104 aa2.86□□□□□ -1.95
VPS41YDR080W MRI1Q06489 411 aaKnown RBP2.86□□□□□ -1.95
VPS41YDR080W SPN1Q06505 410 aaPredicted RBP2.86□□□□□ -1.95
VPS41YDR080W MSB2P32334 1306 aa2.86□□□□□ -1.95
VPS41YDR080W SES1P07284 462 aaKnown RBP2.85□□□□□ -1.95
VPS41YDR080W CDC16P09798 840 aa2.85□□□□□ -1.95
VPS41YDR080W RPN10P38886 268 aaKnown RBP2.85□□□□□ -1.95
VPS41YDR080W DAS1P47005 663 aa2.85□□□□□ -1.95
VPS41YDR080W ECM3Q99252 613 aa2.85□□□□□ -1.95
VPS41YDR080W MET6P05694 767 aaKnown RBP2.85□□□□□ -1.95
VPS41YDR080W IME1P21190 360 aa2.85□□□□□ -1.95
VPS41YDR080W MAK31P23059 88 aa2.85□□□□□ -1.95
VPS41YDR080W YEL1P34225 687 aa2.85□□□□□ -1.95
VPS41YDR080W TIM44Q01852 431 aa2.85□□□□□ -1.95
VPS41YDR080W TFB2Q02939 513 aa2.85□□□□□ -1.95
VPS41YDR080W VPS36Q06696 566 aa2.85□□□□□ -1.95
VPS41YDR080W DSE3Q08729 430 aa2.85□□□□□ -1.95
VPS41YDR080W MEX67Q99257 599 aaKnown RBP2.85□□□□□ -1.95
VPS41YDR080W CHO2P05374 869 aaKnown RBP2.85□□□□□ -1.95
VPS41YDR080W GSY1P23337 708 aa2.85□□□□□ -1.95
VPS41YDR080W TRZ1P36159 838 aaPredicted RBP2.85□□□□□ -1.95
VPS41YDR080W RXT2P38255 430 aa2.85□□□□□ -1.95
VPS41YDR080W YNL134CP53912 376 aaKnown RBP2.85□□□□□ -1.95
VPS41YDR080W SUE1Q06524 206 aa2.85□□□□□ -1.95
VPS41YDR080W PEX1P24004 1043 aa2.84□□□□□ -1.95
VPS41YDR080W MVD1P32377 396 aaKnown RBP2.84□□□□□ -1.95
VPS41YDR080W NDT80P38830 627 aa2.84□□□□□ -1.95
VPS41YDR080W VID28P40547 921 aa2.84□□□□□ -1.95
VPS41YDR080W CTK1Q03957 528 aaKnown RBP2.84□□□□□ -1.95
VPS41YDR080W YDR341CQ05506 607 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 89 ms