RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W YIR016WP40572 265 aa9.72□□□□□ -0.85
SED1YDR077W ROK1P45818 564 aaPredicted RBP9.72□□□□□ -0.85
SED1YDR077W PIB1Q06651 286 aa9.72□□□□□ -0.85
SED1YDR077W YLR053CQ12026 108 aa9.72□□□□□ -0.85
SED1YDR077W ENO2P00925 437 aaKnown RBP9.71□□□□□ -0.86
SED1YDR077W PDE1P22434 369 aa9.71□□□□□ -0.86
SED1YDR077W GID7P25569 745 aa9.71□□□□□ -0.86
SED1YDR077W PMI40P29952 429 aaKnown RBP9.71□□□□□ -0.86
SED1YDR077W RAD16P31244 790 aa9.71□□□□□ -0.86
SED1YDR077W VAC8P39968 578 aa9.71□□□□□ -0.86
SED1YDR077W LIA1P47120 325 aaKnown RBP9.71□□□□□ -0.86
SED1YDR077W MRX6P48564 524 aa9.71□□□□□ -0.86
SED1YDR077W TAN1P53072 289 aaPredicted RBP9.71□□□□□ -0.86
SED1YDR077W NRD1P53617 575 aaKnown RBP RIP-Chip data9.71□□□□□ -0.86not detected
SED1YDR077W HST2P53686 357 aa9.71□□□□□ -0.86
SED1YDR077W YET3Q07451 203 aa9.71□□□□□ -0.86
SED1YDR077W LCB4Q12246 624 aa9.71□□□□□ -0.86
SED1YDR077W HSP60P19882 572 aaKnown RBP9.7□□□□□ -0.86
SED1YDR077W YSW1P38280 609 aa9.7□□□□□ -0.86
SED1YDR077W NUP60P39705 539 aa9.7□□□□□ -0.86
SED1YDR077W SSP120P39931 234 aaKnown RBP9.7□□□□□ -0.86
SED1YDR077W MRX1P40050 688 aa9.7□□□□□ -0.86
SED1YDR077W TDA10P42938 290 aa9.7□□□□□ -0.86
SED1YDR077W SNG1P46950 547 aa9.7□□□□□ -0.86
SED1YDR077W UTP8P53276 713 aaKnown RBP9.7□□□□□ -0.86
SED1YDR077W BIO4P53630 237 aa9.7□□□□□ -0.86
SED1YDR077W DOS2P54858 310 aa9.7□□□□□ -0.86
SED1YDR077W PIR3Q03180 325 aa9.7□□□□□ -0.86
SED1YDR077W RLI1Q03195 608 aaKnown RBP9.7□□□□□ -0.86
SED1YDR077W ADI1Q03677 179 aa9.7□□□□□ -0.86
SED1YDR077W INP2Q03824 705 aa9.7□□□□□ -0.86
SED1YDR077W SPO71Q03868 1245 aa9.7□□□□□ -0.86
SED1YDR077W YLR257WQ06146 321 aaKnown RBP9.7□□□□□ -0.86
SED1YDR077W LDB17Q12342 491 aa9.7□□□□□ -0.86
SED1YDR077W NDJ1Q12366 352 aa9.7□□□□□ -0.86
SED1YDR077W AFI1Q99222 893 aa9.7□□□□□ -0.86
SED1YDR077W APE1P14904 514 aa9.69□□□□□ -0.86
SED1YDR077W YCL068CP25593 260 aa9.69□□□□□ -0.86
SED1YDR077W PSE1P32337 1089 aaKnown RBP9.69□□□□□ -0.86
SED1YDR077W SMI1P32566 505 aa9.69□□□□□ -0.86
SED1YDR077W SEC6P32844 805 aa9.69□□□□□ -0.86
SED1YDR077W YBR032WP38223 100 aa9.69□□□□□ -0.86
SED1YDR077W YBR062CP38239 180 aa9.69□□□□□ -0.86
SED1YDR077W SRP68P38687 599 aaKnown RBP9.69□□□□□ -0.86
SED1YDR077W FAF1P40546 346 aaPredicted RBP9.69□□□□□ -0.86
SED1YDR077W UFE1P41834 346 aa9.69□□□□□ -0.86
SED1YDR077W TFG1P41895 735 aaPredicted RBP9.69□□□□□ -0.86
SED1YDR077W MET14Q02196 202 aa9.69□□□□□ -0.86
SED1YDR077W YMR102CQ03177 834 aa9.69□□□□□ -0.86
SED1YDR077W ARP9Q05123 467 aa9.69□□□□□ -0.86
SED1YDR077W SWC7Q06707 132 aa9.69□□□□□ -0.86
SED1YDR077W HIP1P06775 603 aa9.68□□□□□ -0.86
SED1YDR077W AMS1P22855 1083 aa9.68□□□□□ -0.86
SED1YDR077W AAD3P25612 363 aa9.68□□□□□ -0.86
SED1YDR077W ADD66P36040 267 aa9.68□□□□□ -0.86
SED1YDR077W CRP1P38845 465 aaKnown RBP9.68□□□□□ -0.86
SED1YDR077W FMP10P40098 244 aa9.68□□□□□ -0.86
SED1YDR077W YFL012WP43580 148 aa9.68□□□□□ -0.86
SED1YDR077W PRP24P49960 444 aaKnown RBP9.68□□□□□ -0.86
SED1YDR077W PSP1P50896 841 aaKnown RBP9.68□□□□□ -0.86
SED1YDR077W TEP1P53916 434 aa9.68□□□□□ -0.86
SED1YDR077W SIW14P53965 281 aa9.68□□□□□ -0.86
SED1YDR077W SHE9Q04172 456 aa9.68□□□□□ -0.86
SED1YDR077W BUD22Q04347 519 aaKnown RBP9.68□□□□□ -0.86
SED1YDR077W TAO3P40468 2376 aa9.68□□□□□ -0.86
SED1YDR077W SPE1P08432 466 aa9.67□□□□□ -0.86
SED1YDR077W MTF1P14908 341 aaKnown RBP9.67□□□□□ -0.86
SED1YDR077W IDI1P15496 288 aa9.67□□□□□ -0.86
SED1YDR077W NIP1P32497 812 aaKnown RBP9.67□□□□□ -0.86
SED1YDR077W MRE11P32829 692 aa9.67□□□□□ -0.86
SED1YDR077W SFB3P38810 929 aa9.67□□□□□ -0.86
SED1YDR077W YJL206CP39529 758 aa9.67□□□□□ -0.86
SED1YDR077W RRN7P40992 514 aa9.67□□□□□ -0.86
SED1YDR077W BST1P43571 1029 aa9.67□□□□□ -0.86
SED1YDR077W DLD2P46681 530 aaKnown RBP9.67□□□□□ -0.86
SED1YDR077W TAF6P53040 516 aa9.67□□□□□ -0.86
SED1YDR077W RCF2P53721 224 aa9.67□□□□□ -0.86
SED1YDR077W CDC123Q05791 360 aa9.67□□□□□ -0.86
SED1YDR077W YSH1Q06224 779 aaPredicted RBP9.67□□□□□ -0.86
SED1YDR077W PGC1Q08959 321 aa9.67□□□□□ -0.86
SED1YDR077W LPX1Q12405 387 aaKnown RBP9.67□□□□□ -0.86
SED1YDR077W SPE4Q12455 300 aa9.67□□□□□ -0.86
SED1YDR077W KCS1Q12494 1050 aa9.67□□□□□ -0.86
SED1YDR077W MIS1P09440 975 aaKnown RBP9.66□□□□□ -0.86
SED1YDR077W INO1P11986 533 aa9.66□□□□□ -0.86
SED1YDR077W PRP16P15938 1071 aaPredicted RBP9.66□□□□□ -0.86
SED1YDR077W RIM1P32445 135 aaKnown RBP9.66□□□□□ -0.86
SED1YDR077W CYM1P32898 989 aa9.66□□□□□ -0.86
SED1YDR077W SGE1P33335 543 aa9.66□□□□□ -0.86
SED1YDR077W RRP14P36080 434 aaKnown RBP9.66□□□□□ -0.86
SED1YDR077W HEK2P38199 381 aaKnown RBP RIP-Chip data9.66□□□□□ -0.86 RIP-Chip
SED1YDR077W YJL107CP42947 387 aa9.66□□□□□ -0.86
SED1YDR077W TRF5P48561 642 aaKnown RBP9.66□□□□□ -0.86
SED1YDR077W UBX4P54730 416 aa9.66□□□□□ -0.86
SED1YDR077W VPS16Q03308 798 aa9.66□□□□□ -0.86
SED1YDR077W SLP1Q12232 587 aa9.66□□□□□ -0.86
SED1YDR077W COX5AP00424 153 aa9.65□□□□□ -0.86
SED1YDR077W PEX1P24004 1043 aa9.65□□□□□ -0.86
SED1YDR077W COY1P34237 679 aa9.65□□□□□ -0.86
SED1YDR077W KTR4P38131 464 aa9.65□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms