RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W OCA5P38738 679 aa3.81□□□□□ -1.8
HMRA1YCR097W ERV46P39727 415 aa3.81□□□□□ -1.8
HMRA1YCR097W PEF1P53238 335 aa3.81□□□□□ -1.8
HMRA1YCR097W PTA1Q01329 785 aaPredicted RBP3.81□□□□□ -1.8
HMRA1YCR097W DIG1Q03063 452 aaKnown RBP3.81□□□□□ -1.8
HMRA1YCR097W SAP1P39955 897 aaKnown RBP3.8□□□□□ -1.8
HMRA1YCR097W MAM1P40065 302 aa3.8□□□□□ -1.8
HMRA1YCR097W YJL107CP42947 387 aa3.8□□□□□ -1.8
HMRA1YCR097W BET4Q00618 327 aa3.8□□□□□ -1.8
HMRA1YCR097W UBP16Q02863 499 aa3.8□□□□□ -1.8
HMRA1YCR097W ECM16Q04217 1267 aaKnown RBP3.8□□□□□ -1.8
HMRA1YCR097W PLM2Q04383 521 aa3.8□□□□□ -1.8
HMRA1YCR097W LCB4Q12246 624 aa3.8□□□□□ -1.8
HMRA1YCR097W YER175W-AQ8TGU4 54 aa3.8□□□□□ -1.8
HMRA1YCR097W YND1P40009 630 aa3.79□□□□□ -1.8
HMRA1YCR097W GZF3P42944 551 aaKnown RBP3.79□□□□□ -1.8
HMRA1YCR097W YNL144CP53907 740 aa3.79□□□□□ -1.8
HMRA1YCR097W RPL42AP0CX27 106 aaKnown RBP3.78□□□□□ -1.8
HMRA1YCR097W RPL42BP0CX28 106 aaKnown RBP3.78□□□□□ -1.8
HMRA1YCR097W AEP2P22136 580 aa3.78□□□□□ -1.8
HMRA1YCR097W VPS8P39702 1274 aa3.78□□□□□ -1.8
HMRA1YCR097W OSW7P43611 510 aa3.78□□□□□ -1.8
HMRA1YCR097W YLR281CQ05863 155 aa3.78□□□□□ -1.8
HMRA1YCR097W RPL8AP17076 256 aaKnown RBP3.77□□□□□ -1.81
HMRA1YCR097W HXT4P32467 576 aa3.77□□□□□ -1.81
HMRA1YCR097W RKM3P38222 552 aa3.77□□□□□ -1.81
HMRA1YCR097W DHH1P39517 506 aaKnown RBP3.77□□□□□ -1.81
HMRA1YCR097W ORC5P50874 479 aa3.76□□□□□ -1.81
HMRA1YCR097W ACS1Q01574 713 aa3.76□□□□□ -1.81
HMRA1YCR097W NIC96P34077 839 aa3.75□□□□□ -1.81
HMRA1YCR097W DID4P36108 232 aa3.75□□□□□ -1.81
HMRA1YCR097W TYS1P36421 394 aaKnown RBP3.75□□□□□ -1.81
HMRA1YCR097W MNN11P46985 422 aaKnown RBP3.75□□□□□ -1.81
HMRA1YCR097W COS12P53053 380 aa3.75□□□□□ -1.81
HMRA1YCR097W MTQ2Q03920 221 aaPredicted RBP3.75□□□□□ -1.81
HMRA1YCR097W YML053CQ04978 212 aa3.75□□□□□ -1.81
HMRA1YCR097W NGL1Q08213 363 aaKnown RBP3.75□□□□□ -1.81
HMRA1YCR097W CWH43P25618 953 aa3.74□□□□□ -1.81
HMRA1YCR097W ARN1P38731 627 aa3.74□□□□□ -1.81
HMRA1YCR097W MDR1P53258 950 aa3.74□□□□□ -1.81
HMRA1YCR097W SMA2Q04658 369 aa3.74□□□□□ -1.81
HMRA1YCR097W FMP42Q04991 504 aa3.74□□□□□ -1.81
HMRA1YCR097W GPN2Q08726 347 aaPredicted RBP3.74□□□□□ -1.81
HMRA1YCR097W YTM1Q12024 460 aaPredicted RBP3.74□□□□□ -1.81
HMRA1YCR097W NOP14Q99207 810 aaKnown RBP3.74□□□□□ -1.81
HMRA1YCR097W PCL6P40038 420 aa3.73□□□□□ -1.81
HMRA1YCR097W YAT1P80235 687 aa3.73□□□□□ -1.81
HMRA1YCR097W YDL242WQ07746 117 aa3.73□□□□□ -1.81
HMRA1YCR097W SES1P07284 462 aaKnown RBP3.72□□□□□ -1.81
HMRA1YCR097W QRI7P43122 407 aa3.72□□□□□ -1.81
HMRA1YCR097W FPR4Q06205 392 aaPredicted RBP3.72□□□□□ -1.81
HMRA1YCR097W TIP41Q12199 356 aa3.72□□□□□ -1.81
HMRA1YCR097W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
HMRA1YCR097W GSH1P32477 678 aa3.71□□□□□ -1.82
HMRA1YCR097W PRP16P15938 1071 aaPredicted RBP3.7□□□□□ -1.82
HMRA1YCR097W CDC23P16522 626 aa3.7□□□□□ -1.82
HMRA1YCR097W THI73Q07904 523 aa3.7□□□□□ -1.82
HMRA1YCR097W VPS5Q92331 675 aa3.7□□□□□ -1.82
HMRA1YCR097W KGD2P19262 463 aaPredicted RBP3.69□□□□□ -1.82
HMRA1YCR097W ATP12P22135 325 aa3.69□□□□□ -1.82
HMRA1YCR097W SRP68P38687 599 aaKnown RBP3.69□□□□□ -1.82
HMRA1YCR097W BZZ1P38822 633 aa3.69□□□□□ -1.82
HMRA1YCR097W UBP7P40453 1071 aa3.69□□□□□ -1.82
HMRA1YCR097W IMP4P53941 290 aaKnown RBP3.69□□□□□ -1.82
HMRA1YCR097W FCP1Q03254 732 aa3.69□□□□□ -1.82
HMRA1YCR097W SND1Q04007 877 aa3.69□□□□□ -1.82
HMRA1YCR097W ARG1P22768 420 aa3.68□□□□□ -1.82
HMRA1YCR097W VBA2P38358 474 aaKnown RBP3.68□□□□□ -1.82
HMRA1YCR097W RNR4P49723 345 aaKnown RBP3.68□□□□□ -1.82
HMRA1YCR097W RNH70P53331 553 aa3.68□□□□□ -1.82
HMRA1YCR097W MSS51P32335 436 aa3.67□□□□□ -1.82
HMRA1YCR097W MNN2P38069 597 aa3.67□□□□□ -1.82
HMRA1YCR097W STB5P38699 743 aa3.67□□□□□ -1.82
HMRA1YCR097W ARO9P38840 513 aaPredicted RBP3.67□□□□□ -1.82
HMRA1YCR097W LNP1P38878 278 aa3.67□□□□□ -1.82
HMRA1YCR097W IRC5P43610 853 aa3.67□□□□□ -1.82
HMRA1YCR097W VPS25P47142 202 aa3.67□□□□□ -1.82
HMRA1YCR097W HLJ1P48353 224 aa3.67□□□□□ -1.82
HMRA1YCR097W ILV2P07342 687 aaKnown RBP3.66□□□□□ -1.82
HMRA1YCR097W YLR352WQ06479 807 aa3.66□□□□□ -1.82
HMRA1YCR097W YOR378WQ08902 515 aa3.66□□□□□ -1.82
HMRA1YCR097W YPL191CQ08930 360 aa3.66□□□□□ -1.82
HMRA1YCR097W RSA1Q08932 381 aa3.66□□□□□ -1.82
HMRA1YCR097W YLR112WQ12130 139 aa3.66□□□□□ -1.82
HMRA1YCR097W TAH18Q12181 623 aa3.66□□□□□ -1.82
HMRA1YCR097W PTC6P25646 442 aa3.65□□□□□ -1.83
HMRA1YCR097W VPS41P38959 992 aa3.65□□□□□ -1.83
HMRA1YCR097W TPA1P40032 644 aaKnown RBP3.65□□□□□ -1.83
HMRA1YCR097W ROK1P45818 564 aaPredicted RBP3.65□□□□□ -1.83
HMRA1YCR097W CRZ1P53968 678 aa3.65□□□□□ -1.83
HMRA1YCR097W IZH1Q03419 316 aa3.65□□□□□ -1.83
HMRA1YCR097W PDR8Q06149 701 aa3.65□□□□□ -1.83
HMRA1YCR097W SEC1P30619 724 aaKnown RBP3.64□□□□□ -1.83
HMRA1YCR097W PEA2P40091 420 aa3.64□□□□□ -1.83
HMRA1YCR097W IDS2P46958 469 aa3.64□□□□□ -1.83
HMRA1YCR097W MNT2P53059 558 aa3.64□□□□□ -1.83
HMRA1YCR097W DNM1P54861 757 aa3.64□□□□□ -1.83
HMRA1YCR097W APL5Q08951 932 aaKnown RBP3.64□□□□□ -1.83
HMRA1YCR097W URA3P03962 267 aa3.63□□□□□ -1.83
HMRA1YCR097W SER1P33330 395 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms