RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	ARG1	P22768	420 aa		3.75	□□□□□ -1.81
CMD1	YBR109C	PWP2	P25635	923 aa	Known RBP	3.75	□□□□□ -1.81
CMD1	YBR109C	PET309	P32522	965 aa	Predicted RBP	3.75	□□□□□ -1.81
CMD1	YBR109C	CTP1	P38152	299 aa		3.75	□□□□□ -1.81
CMD1	YBR109C	FUI1	P38196	639 aa		3.75	□□□□□ -1.81
CMD1	YBR109C	IES5	P40060	125 aa		3.75	□□□□□ -1.81
CMD1	YBR109C	KHA1	P40309	873 aa		3.75	□□□□□ -1.81
CMD1	YBR109C	IMA5	P40884	581 aa		3.75	□□□□□ -1.81
CMD1	YBR109C	DSD1	P53095	428 aa		3.75	□□□□□ -1.81
CMD1	YBR109C	TEP1	P53916	434 aa		3.75	□□□□□ -1.81
CMD1	YBR109C	MOT3	P54785	490 aa	Known RBP	3.75	□□□□□ -1.81
CMD1	YBR109C	MUK1	Q02866	612 aa		3.75	□□□□□ -1.81
CMD1	YBR109C	IZH3	Q07959	543 aa		3.75	□□□□□ -1.81
CMD1	YBR109C	USV1	Q12132	391 aa		3.75	□□□□□ -1.81
CMD1	YBR109C	SET3	P36124	751 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	YHL017W	P38745	532 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	SWD1	P39706	426 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	DJP1	P40564	432 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	STU2	P46675	888 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	MAD3	P47074	515 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	HST1	P53685	503 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	SSL2	Q00578	843 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	YMR206W	Q03695	313 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	ATG16	Q03818	150 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	VMS1	Q04311	632 aa	Known RBP	3.74	□□□□□ -1.81
CMD1	YBR109C	TRI1	Q05024	226 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	NKP2	Q06162	153 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	MCH5	Q08777	521 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	HOS1	Q12214	470 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	NCB2	Q92317	146 aa		3.74	□□□□□ -1.81
CMD1	YBR109C	ROM2	P51862	1356 aa	Known RBP	3.74	□□□□□ -1.81
CMD1	YBR109C	BNI1	P41832	1953 aa		3.73	□□□□□ -1.81
CMD1	YBR109C	TUF1	P02992	437 aa	Known RBP	3.73	□□□□□ -1.81
CMD1	YBR109C	SUP35	P05453	685 aa	Known RBP	3.73	□□□□□ -1.81
CMD1	YBR109C	FUB1	P25659	250 aa		3.73	□□□□□ -1.81
CMD1	YBR109C	HSP104	P31539	908 aa	Known RBP	3.73	□□□□□ -1.81
CMD1	YBR109C	NTH1	P32356	751 aa		3.73	□□□□□ -1.81
CMD1	YBR109C	MIC60	P36112	540 aa		3.73	□□□□□ -1.81
CMD1	YBR109C	PCL5	P38794	229 aa		3.73	□□□□□ -1.81
CMD1	YBR109C	YHR097C	P38809	366 aa	Known RBP	3.73	□□□□□ -1.81
CMD1	YBR109C	BDH2	P39713	417 aa		3.73	□□□□□ -1.81
CMD1	YBR109C	ACA1	P39970	489 aa		3.73	□□□□□ -1.81
CMD1	YBR109C	LRO1	P40345	661 aa		3.73	□□□□□ -1.81
CMD1	YBR109C	HYR1	P40581	163 aa	Known RBP	3.73	□□□□□ -1.81
CMD1	YBR109C	YGR054W	P53235	642 aa	Known RBP	3.73	□□□□□ -1.81
CMD1	YBR109C	MDR1	P53258	950 aa		3.73	□□□□□ -1.81
CMD1	YBR109C	YGR151C	P53287	111 aa		3.73	□□□□□ -1.81
CMD1	YBR109C	ATG4	P53867	494 aa		3.73	□□□□□ -1.81
CMD1	YBR109C	YSH1	Q06224	779 aa	Predicted RBP	3.73	□□□□□ -1.81
CMD1	YBR109C	ARR3	Q06598	404 aa		3.73	□□□□□ -1.81
CMD1	YBR109C	YDL086W	Q07505	273 aa		3.73	□□□□□ -1.81
CMD1	YBR109C	BMS1	Q08965	1183 aa	Known RBP	3.73	□□□□□ -1.81
CMD1	YBR109C	TOP1	P04786	769 aa		3.72	□□□□□ -1.81
CMD1	YBR109C	CDC16	P09798	840 aa		3.72	□□□□□ -1.81
CMD1	YBR109C	BIK1	P11709	440 aa		3.72	□□□□□ -1.81
CMD1	YBR109C	PHO81	P17442	1178 aa		3.72	□□□□□ -1.81
CMD1	YBR109C	VPS33	P20795	691 aa		3.72	□□□□□ -1.81
CMD1	YBR109C	UBS1	P38290	277 aa		3.72	□□□□□ -1.81
CMD1	YBR109C	CBR1	P38626	284 aa	Known RBP	3.72	□□□□□ -1.81
CMD1	YBR109C	YLF2	P38746	405 aa		3.72	□□□□□ -1.81
CMD1	YBR109C	SPC72	P39723	622 aa		3.72	□□□□□ -1.81
CMD1	YBR109C	NDC80	P40460	691 aa		3.72	□□□□□ -1.81
CMD1	YBR109C	SNF12	P53628	566 aa		3.72	□□□□□ -1.81
CMD1	YBR109C	SMX3	P54999	86 aa	Predicted RBP	3.72	□□□□□ -1.81
CMD1	YBR109C	ACS1	Q01574	713 aa		3.72	□□□□□ -1.81
CMD1	YBR109C	CSI1	Q04368	295 aa		3.72	□□□□□ -1.81
CMD1	YBR109C	ACF2	Q12168	779 aa		3.72	□□□□□ -1.81
CMD1	YBR109C	PCK1	P10963	549 aa		3.71	□□□□□ -1.82
CMD1	YBR109C	ABF1	P14164	731 aa		3.71	□□□□□ -1.82
CMD1	YBR109C	SEC18	P18759	758 aa	Known RBP	3.71	□□□□□ -1.82
CMD1	YBR109C	GCD7	P32502	381 aa	Predicted RBP	3.71	□□□□□ -1.82
CMD1	YBR109C	ELF1	P36053	145 aa		3.71	□□□□□ -1.82
CMD1	YBR109C	MRPL7	P36519	292 aa		3.71	□□□□□ -1.82
CMD1	YBR109C	APM3	P38153	483 aa		3.71	□□□□□ -1.82
CMD1	YBR109C	TCD1	P38756	429 aa		3.71	□□□□□ -1.82
CMD1	YBR109C	PPE1	P38796	400 aa		3.71	□□□□□ -1.82
CMD1	YBR109C	YJL193W	P39542	402 aa		3.71	□□□□□ -1.82
CMD1	YBR109C	RPT2	P40327	437 aa	Known RBP	3.71	□□□□□ -1.82
CMD1	YBR109C	ARG2	P40360	574 aa		3.71	□□□□□ -1.82
CMD1	YBR109C	GSM1	P42950	618 aa		3.71	□□□□□ -1.82
CMD1	YBR109C	NMA2	P53204	395 aa		3.71	□□□□□ -1.82
CMD1	YBR109C	YGR021W	P53212	290 aa		3.71	□□□□□ -1.82
CMD1	YBR109C	EFR3	Q03653	782 aa	Known RBP	3.71	□□□□□ -1.82
CMD1	YBR109C	RKI1	Q12189	258 aa		3.71	□□□□□ -1.82
CMD1	YBR109C	YRF1-2	P40105	1681 aa		3.71	□□□□□ -1.82
CMD1	YBR109C	MRP7	P12687	371 aa		3.7	□□□□□ -1.82
CMD1	YBR109C	TRX2	P22803	104 aa	Known RBP	3.7	□□□□□ -1.82
CMD1	YBR109C	MSH1	P25846	959 aa		3.7	□□□□□ -1.82
CMD1	YBR109C	KSP1	P38691	1029 aa	Known RBP	3.7	□□□□□ -1.82
CMD1	YBR109C	STT3	P39007	718 aa	Known RBP	3.7	□□□□□ -1.82
CMD1	YBR109C	YEL025C	P39991	1188 aa		3.7	□□□□□ -1.82
CMD1	YBR109C	SPO22	P40511	975 aa		3.7	□□□□□ -1.82
CMD1	YBR109C	STB4	P50104	949 aa		3.7	□□□□□ -1.82
CMD1	YBR109C	DIP5	P53388	608 aa		3.7	□□□□□ -1.82
CMD1	YBR109C	EIS1	Q05050	843 aa	Known RBP	3.7	□□□□□ -1.82
CMD1	YBR109C	CIA1	Q05583	330 aa		3.7	□□□□□ -1.82
CMD1	YBR109C	HBT1	Q07653	1046 aa	Known RBP	3.7	□□□□□ -1.82
CMD1	YBR109C	AAD4	Q07747	329 aa		3.7	□□□□□ -1.82
CMD1	YBR109C	NDJ1	Q12366	352 aa		3.7	□□□□□ -1.82
CMD1	YBR109C	SEC12	P11655	471 aa		3.69	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 70.7 ms