RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	SLC4A8	Q2Y0W8	1093 aa		32.2	■■■□□ 2.75
VEGFA-231	ENST00000640499	APPBP2	Q92624	585 aa		32.2	■■■□□ 2.75
VEGFA-231	ENST00000640499	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	32.2	■■■□□ 2.75	3e-7	■■■■■ 34.2
VEGFA-231	ENST00000640499	ZFY	P08048	801 aa	Predicted RBP	32.19	■■■□□ 2.74
VEGFA-231	ENST00000640499	EVI5L	Q96CN4	794 aa		32.19	■■■□□ 2.74
VEGFA-231	ENST00000640499	STRBP	Q96SI9	672 aa	Known RBP	32.19	■■■□□ 2.74
VEGFA-231	ENST00000640499	FSD1	Q9BTV5	496 aa		32.19	■■■□□ 2.74
VEGFA-231	ENST00000640499	DCP1A	Q9NPI6	582 aa	Predicted RBP	32.19	■■■□□ 2.74
VEGFA-231	ENST00000640499		M0R2C6	588 aa		32.18	■■■□□ 2.74
VEGFA-231	ENST00000640499	PLCD1	P51178	756 aa		32.18	■■■□□ 2.74
VEGFA-231	ENST00000640499	ERO1B	Q86YB8	467 aa		32.18	■■■□□ 2.74
VEGFA-231	ENST00000640499	OTUD5	Q96G74	571 aa		32.18	■■■□□ 2.74
VEGFA-231	ENST00000640499	MS4A4A	Q96JQ5	239 aa		32.18	■■■□□ 2.74
VEGFA-231	ENST00000640499	SEC62	Q99442	399 aa	Known RBP	32.18	■■■□□ 2.74
VEGFA-231	ENST00000640499	NAV1	Q8NEY1	1877 aa		32.17	■■■□□ 2.74
VEGFA-231	ENST00000640499	FOXP4	Q8IVH2	680 aa	Predicted RBP	32.17	■■■□□ 2.74
VEGFA-231	ENST00000640499	REM2	Q8IYK8	340 aa	Predicted RBP	32.17	■■■□□ 2.74
VEGFA-231	ENST00000640499	HERC5	Q9UII4	1024 aa	Known RBP	32.17	■■■□□ 2.74
VEGFA-231	ENST00000640499	SCYL3	Q8IZE3	742 aa		32.16	■■■□□ 2.74
VEGFA-231	ENST00000640499	AIDA	Q96BJ3	306 aa		32.16	■■■□□ 2.74
VEGFA-231	ENST00000640499	RNF186	Q9NXI6	227 aa		32.16	■■■□□ 2.74
VEGFA-231	ENST00000640499	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	32.16	■■■□□ 2.74
VEGFA-231	ENST00000640499	CTNND1	O60716	968 aa	Known RBP	32.15	■■■□□ 2.74
VEGFA-231	ENST00000640499	JAG1	P78504	1218 aa		32.15	■■■□□ 2.74
VEGFA-231	ENST00000640499	ZMYM1	Q5SVZ6	1142 aa		32.15	■■■□□ 2.74
VEGFA-231	ENST00000640499	PTPN18	Q99952	460 aa		32.15	■■■□□ 2.74
VEGFA-231	ENST00000640499	TSKS	Q9UJT2	592 aa		32.15	■■■□□ 2.74
VEGFA-231	ENST00000640499	TESPA1	A2RU30	521 aa	Predicted RBP	32.14	■■■□□ 2.74
VEGFA-231	ENST00000640499	MANSC4	A6NHS7	340 aa	Predicted RBP	32.14	■■■□□ 2.74
VEGFA-231	ENST00000640499	SMIM22	K7EJ46	135 aa		32.14	■■■□□ 2.74
VEGFA-231	ENST00000640499	IRF6	O14896	467 aa		32.14	■■■□□ 2.74
VEGFA-231	ENST00000640499	CYP2D6	P10635	497 aa		32.14	■■■□□ 2.74
VEGFA-231	ENST00000640499	HSPA8	P11142	646 aa	Known RBP	32.14	■■■□□ 2.74
VEGFA-231	ENST00000640499	DOCK1	Q14185	1865 aa		32.14	■■■□□ 2.74
VEGFA-231	ENST00000640499	BAZ2A	Q9UIF9	1905 aa	Known RBP	32.14	■■■□□ 2.74
VEGFA-231	ENST00000640499	PPAT	Q06203	517 aa		32.13	■■■□□ 2.73
VEGFA-231	ENST00000640499	PPIL2	Q13356	520 aa		32.13	■■■□□ 2.73
VEGFA-231	ENST00000640499	SHROOM1	Q2M3G4	852 aa	Predicted RBP	32.13	■■■□□ 2.73
VEGFA-231	ENST00000640499	ATP8A2	Q9NTI2	1148 aa		32.13	■■■□□ 2.73
VEGFA-231	ENST00000640499	MCM9	Q9NXL9	1143 aa		32.13	■■■□□ 2.73
VEGFA-231	ENST00000640499	SLC4A4	Q9Y6R1	1079 aa		32.13	■■■□□ 2.73
VEGFA-231	ENST00000640499	PHIP	Q8WWQ0	1821 aa		32.12	■■■□□ 2.73
VEGFA-231	ENST00000640499	IGF2BP3	O00425	579 aa	Known RBP eCLIP	32.12	■■■□□ 2.73
VEGFA-231	ENST00000640499	HLA-DOA	P06340	250 aa		32.12	■■■□□ 2.73
VEGFA-231	ENST00000640499	PTPRA	P18433	802 aa		32.12	■■■□□ 2.73
VEGFA-231	ENST00000640499	EHD4	Q9H223	541 aa		32.12	■■■□□ 2.73
VEGFA-231	ENST00000640499	GSG1L2	A8MUP6	293 aa		32.11	■■■□□ 2.73
VEGFA-231	ENST00000640499	GPAA1	O43292	621 aa		32.11	■■■□□ 2.73
VEGFA-231	ENST00000640499	TRPA1	O75762	1119 aa		32.11	■■■□□ 2.73
VEGFA-231	ENST00000640499	CAP2	P40123	477 aa		32.11	■■■□□ 2.73
VEGFA-231	ENST00000640499	GABPA	Q06546	454 aa		32.11	■■■□□ 2.73
VEGFA-231	ENST00000640499	TTC6	Q86TZ1	520 aa		32.11	■■■□□ 2.73
VEGFA-231	ENST00000640499	CCDC84	Q86UT8	332 aa	Predicted RBP	32.11	■■■□□ 2.73
VEGFA-231	ENST00000640499	BRI3BP	Q8WY22	251 aa		32.11	■■■□□ 2.73
VEGFA-231	ENST00000640499	BEGAIN	Q9BUH8	593 aa		32.11	■■■□□ 2.73
VEGFA-231	ENST00000640499	SREBF2	Q12772	1141 aa		32.1	■■■□□ 2.73
VEGFA-231	ENST00000640499	LRRFIP1	Q32MZ4	808 aa	Known RBP	32.1	■■■□□ 2.73
VEGFA-231	ENST00000640499	IFNL1	Q8IU54	200 aa		32.1	■■■□□ 2.73
VEGFA-231	ENST00000640499	SERPINB13	Q9UIV8	391 aa		32.1	■■■□□ 2.73
VEGFA-231	ENST00000640499	ATAD5	Q96QE3	1844 aa		32.1	■■■□□ 2.73
VEGFA-231	ENST00000640499	CYP2D7	A0A087X1C5	515 aa		32.09	■■■□□ 2.73
VEGFA-231	ENST00000640499	POLR3D	P05423	398 aa	Predicted RBP	32.09	■■■□□ 2.73
VEGFA-231	ENST00000640499	CTCF	P49711	727 aa	Predicted RBP	32.09	■■■□□ 2.73
VEGFA-231	ENST00000640499	INHBE	P58166	350 aa		32.09	■■■□□ 2.73
VEGFA-231	ENST00000640499	TATDN1	Q6P1N9	297 aa		32.09	■■■□□ 2.73
VEGFA-231	ENST00000640499	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	32.09	■■■□□ 2.73
VEGFA-231	ENST00000640499	KCNH4	Q9UQ05	1017 aa		32.09	■■■□□ 2.73
VEGFA-231	ENST00000640499	TRIM6-TRIM34	B2RNG4	842 aa		32.08	■■■□□ 2.73
VEGFA-231	ENST00000640499	CA12	O43570	354 aa		32.08	■■■□□ 2.73
VEGFA-231	ENST00000640499	CENPB	P07199	599 aa	Predicted RBP	32.08	■■■□□ 2.73
VEGFA-231	ENST00000640499	LBX1	P52954	281 aa		32.08	■■■□□ 2.73
VEGFA-231	ENST00000640499	RILPL2	Q969X0	211 aa		32.08	■■■□□ 2.73
VEGFA-231	ENST00000640499	SAGE1	Q9NXZ1	904 aa		32.08	■■■□□ 2.73
VEGFA-231	ENST00000640499	AFG3L2	Q9Y4W6	797 aa		32.08	■■■□□ 2.73
VEGFA-231	ENST00000640499	ZHX2	Q9Y6X8	837 aa		32.08	■■■□□ 2.73
VEGFA-231	ENST00000640499	GSPT1	P15170	499 aa	Known RBP	32.07	■■■□□ 2.72
VEGFA-231	ENST00000640499	SHMT1	P34896	483 aa		32.07	■■■□□ 2.72
VEGFA-231	ENST00000640499	GTF2A2	P52657	109 aa		32.07	■■■□□ 2.72
VEGFA-231	ENST00000640499	MOGS	Q13724	837 aa		32.07	■■■□□ 2.72
VEGFA-231	ENST00000640499	CTR9	Q6PD62	1173 aa		32.07	■■■□□ 2.72
VEGFA-231	ENST00000640499	CCDC129	Q6ZRS4	1044 aa		32.07	■■■□□ 2.72
VEGFA-231	ENST00000640499	FAM227B	Q96M60	508 aa		32.07	■■■□□ 2.72
VEGFA-231	ENST00000640499	R3HDML	Q9H3Y0	253 aa		32.07	■■■□□ 2.72
VEGFA-231	ENST00000640499	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	32.07	■■■□□ 2.72
VEGFA-231	ENST00000640499	PICK1	Q9NRD5	415 aa		32.07	■■■□□ 2.72
VEGFA-231	ENST00000640499	USP17L12	C9JPN9	530 aa		32.06	■■■□□ 2.72
VEGFA-231	ENST00000640499	USP17L21	D6R901	530 aa		32.06	■■■□□ 2.72
VEGFA-231	ENST00000640499	FOXP2	O15409	715 aa		32.06	■■■□□ 2.72
VEGFA-231	ENST00000640499	C12orf60	Q5U649	245 aa		32.06	■■■□□ 2.72
VEGFA-231	ENST00000640499	SKAP1	Q86WV1	359 aa		32.06	■■■□□ 2.72
VEGFA-231	ENST00000640499	CCL15-CCL14	A0A0B4J2E2	113 aa		32.05	■■■□□ 2.72
VEGFA-231	ENST00000640499	CCL15	Q16663	113 aa		32.05	■■■□□ 2.72
VEGFA-231	ENST00000640499	CENPQ	Q7L2Z9	268 aa	Predicted RBP	32.05	■■■□□ 2.72
VEGFA-231	ENST00000640499	TICAM2	Q86XR7	235 aa		32.05	■■■□□ 2.72
VEGFA-231	ENST00000640499	DYNLL2	Q96FJ2	89 aa		32.05	■■■□□ 2.72
VEGFA-231	ENST00000640499		A0A0D9SFI3	127 aa		32.04	■■■□□ 2.72
VEGFA-231	ENST00000640499	GDF11	O95390	407 aa		32.04	■■■□□ 2.72
VEGFA-231	ENST00000640499	SNAPC2	Q13487	334 aa		32.04	■■■□□ 2.72
VEGFA-231	ENST00000640499	TTC22	Q5TAA0	569 aa		32.04	■■■□□ 2.72
VEGFA-231	ENST00000640499	SLC44A5	Q8NCS7	719 aa		32.04	■■■□□ 2.72

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