RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 PCDHA5Q9Y5H7 936 aa16.71■□□□□ 0.27
CLN6-215ENST00000636674 PATL2C9JE40 543 aaKnown RBP16.7■□□□□ 0.26
CLN6-215ENST00000636674 ZSCAN12O43309 604 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 APPP05067 770 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 FGFR2P21802 821 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 RCAN1P53805 252 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 SSRP1Q08945 709 aaKnown RBP16.7■□□□□ 0.26
CLN6-215ENST00000636674 ERCC6LQ2NKX8 1250 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 ISM2Q6H9L7 571 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 AIDAQ96BJ3 306 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 EPB41L4AQ9HCS5 686 aaPredicted RBP16.7■□□□□ 0.26
CLN6-215ENST00000636674 INTS13Q9NVM9 706 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 GOLGA6L9A6NEM1 432 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 MMP1P03956 469 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 PHKA1P46020 1223 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 TERF2Q15554 542 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 NFXL1Q6ZNB6 911 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 HOMER1Q86YM7 354 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 STK11IPQ8N1F8 1099 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 TRIML1Q8N9V2 468 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 ZNF579Q8NAF0 562 aaKnown RBP16.7■□□□□ 0.26
CLN6-215ENST00000636674 FOXP1Q9H334 677 aaPredicted RBP16.7■□□□□ 0.26
CLN6-215ENST00000636674 FANCLQ9NW38 375 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 DNAI1Q9UI46 699 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 SLC12A7Q9Y666 1083 aa16.7■□□□□ 0.26
CLN6-215ENST00000636674 MROH5Q6ZUA9 1318 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 ZNF18P17022 549 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 BMP6P22004 513 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 PTPREP23469 700 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 BMS1Q14692 1282 aaKnown RBP16.69■□□□□ 0.26
CLN6-215ENST00000636674 PUM3Q15397 648 aaKnown RBP16.69■□□□□ 0.26
CLN6-215ENST00000636674 IFNL3Q8IZI9 196 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 LPIN2Q92539 896 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 KRT23Q9C075 422 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 DACH1Q9UI36 760 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 FBXO2Q9UK22 296 aaPredicted RBP16.69■□□□□ 0.26
CLN6-215ENST00000636674 IRS4O14654 1257 aaPredicted RBP16.69■□□□□ 0.26
CLN6-215ENST00000636674 PDE8AO60658 829 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 SARSP49591 514 aaKnown RBP16.69■□□□□ 0.26
CLN6-215ENST00000636674 HLFQ16534 295 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 RILPL1Q5EBL4 403 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 SYNE4Q8N205 404 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 MLKLQ8NB16 471 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 LRRN4CLQ8ND94 238 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 ENOX1Q8TC92 643 aaKnown RBP16.69■□□□□ 0.26
CLN6-215ENST00000636674 SLC26A6Q9BXS9 759 aa16.69■□□□□ 0.26
CLN6-215ENST00000636674 ZNF330Q9Y3S2 320 aaPredicted RBP16.69■□□□□ 0.26
CLN6-215ENST00000636674 TMEM232C9JQI7 657 aa16.68■□□□□ 0.26
CLN6-215ENST00000636674 TOB1P50616 345 aaPredicted RBP16.68■□□□□ 0.26
CLN6-215ENST00000636674 PDE4BQ07343 736 aa16.68■□□□□ 0.26
CLN6-215ENST00000636674 POSTNQ15063 836 aa16.68■□□□□ 0.26
CLN6-215ENST00000636674 SAFBQ15424 915 aaKnown RBP eCLIP16.68■□□□□ 0.26
CLN6-215ENST00000636674 AKNAD1Q5T1N1 836 aa16.68■□□□□ 0.26
CLN6-215ENST00000636674 MPHOSPH8Q99549 860 aa16.68■□□□□ 0.26
CLN6-215ENST00000636674 NAPBQ9H115 298 aa16.68■□□□□ 0.26
CLN6-215ENST00000636674 ZSWIM5Q9P217 1185 aa16.68■□□□□ 0.26
CLN6-215ENST00000636674 MAN1B1Q9UKM7 699 aa16.68■□□□□ 0.26
CLN6-215ENST00000636674 MYH6P13533 1939 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 IFIT3O14879 490 aaKnown RBP16.67■□□□□ 0.26
CLN6-215ENST00000636674 TADA3O75528 432 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 CLCN6P51797 869 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 STAG1Q8WVM7 1258 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 ASAP1Q9ULH1 1129 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 PARP3Q9Y6F1 533 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 PNPLA7Q6ZV29 1317 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 BRWD3Q6RI45 1802 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 VWA3AA6NCI4 1184 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 EFCAB8A8MWE9 144 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 FANCGO15287 622 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 STX10O60499 249 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 TPM1P09493 284 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 MORC3Q14149 939 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 TAF3Q5VWG9 929 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 ZNF771Q7L3S4 317 aaPredicted RBP16.67■□□□□ 0.26
CLN6-215ENST00000636674 DIS3L2Q8IYB7 885 aaKnown RBP16.67■□□□□ 0.26
CLN6-215ENST00000636674 TRIM22Q8IYM9 498 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 PIGBQ92521 554 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 AK7Q96M32 723 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 MYL10Q9BUA6 226 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 UTP14AQ9BVJ6 771 aaKnown RBP16.67■□□□□ 0.26
CLN6-215ENST00000636674 PPP2R2CQ9Y2T4 447 aa16.67■□□□□ 0.26
CLN6-215ENST00000636674 MBD4O95243 580 aa16.66■□□□□ 0.26
CLN6-215ENST00000636674 DEXIO95424 95 aa16.66■□□□□ 0.26
CLN6-215ENST00000636674 GNAT2P19087 354 aa16.66■□□□□ 0.26
CLN6-215ENST00000636674 GPTP24298 496 aa16.66■□□□□ 0.26
CLN6-215ENST00000636674 MAP3K12Q12852 859 aa16.66■□□□□ 0.26
CLN6-215ENST00000636674 ARHGAP29Q52LW3 1261 aa16.66■□□□□ 0.26
CLN6-215ENST00000636674 CT47A1Q5JQC4 288 aaPredicted RBP16.66■□□□□ 0.26
CLN6-215ENST00000636674 KANK3Q6NY19 840 aa16.66■□□□□ 0.26
CLN6-215ENST00000636674 SPATA5Q8NB90 893 aa16.66■□□□□ 0.26
CLN6-215ENST00000636674 SPATA20Q8TB22 786 aa16.66■□□□□ 0.26
CLN6-215ENST00000636674 ARGLU1Q9NWB6 273 aaPredicted RBP16.66■□□□□ 0.26
CLN6-215ENST00000636674 FHOD1Q9Y613 1164 aa16.66■□□□□ 0.26
CLN6-215ENST00000636674 TACC3Q9Y6A5 838 aa16.66■□□□□ 0.26
CLN6-215ENST00000636674 SPATA31A5Q5VU36 1347 aa16.66■□□□□ 0.26
CLN6-215ENST00000636674 SPATA31A7Q8IWB4 1347 aa16.66■□□□□ 0.26
CLN6-215ENST00000636674 BTBD18B2RXH4 712 aa16.65■□□□□ 0.26
CLN6-215ENST00000636674 ERVV-1B6SEH8 477 aa16.65■□□□□ 0.26
CLN6-215ENST00000636674 ZRANB2O95218 330 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLN6-215ENST00000636674 RTN1Q16799 776 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 249.6 ms