RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 NBPF3Q9H094 633 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 NCOA5Q9HCD5 579 aaKnown RBP8.33□□□□□ -1.08
BRCA1-230ENST00000634433 EPB41L4AQ9HCS5 686 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-230ENST00000634433 ANKIB1Q9P2G1 1089 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 ANAPC4Q9UJX5 808 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 IQSEC3Q9UPP2 1182 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-230ENST00000634433 CCDC69A6NI79 296 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 B4E1Z4 1266 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 IFIT3O14879 490 aaKnown RBP8.32□□□□□ -1.08
BRCA1-230ENST00000634433 CCDC173Q0VFZ6 552 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 C15orf52Q6ZUT6 534 aaKnown RBP8.32□□□□□ -1.08
BRCA1-230ENST00000634433 CYB5R4Q7L1T6 521 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 MIGA1Q8NAN2 632 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 WDR66Q8TBY9 1149 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 IGDCC4Q8TDY8 1250 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 LEO1Q8WVC0 666 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-230ENST00000634433 ORC3Q9UBD5 711 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-230ENST00000634433 TCHHQ07283 1943 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 XDHP47989 1333 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 ZBTB43O43298 467 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 BBOX1O75936 387 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 SERPINB2P05120 415 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 GYS1P13807 737 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 NT5C2P49902 561 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 RCAN1P53805 252 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 NAALADL2Q58DX5 795 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 PRR5LQ6MZQ0 368 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 TMC4Q7Z404 712 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 ZNF804AQ7Z570 1209 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 AMIGO3Q86WK7 504 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 C8orf76Q96K31 380 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 CRNKL1Q9BZJ0 848 aaKnown RBP8.32□□□□□ -1.08
BRCA1-230ENST00000634433 HPS5Q9UPZ3 1129 aa8.32□□□□□ -1.08
BRCA1-230ENST00000634433 MYO5AQ9Y4I1 1855 aaKnown RBP8.31□□□□□ -1.08
BRCA1-230ENST00000634433 CCDC196A0A1B0GTZ2 297 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 PRKAB2O43741 272 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 PTMAP06454 111 aaKnown RBP8.31□□□□□ -1.08
BRCA1-230ENST00000634433 SLC3A2P08195 630 aaKnown RBP8.31□□□□□ -1.08
BRCA1-230ENST00000634433 ATP2B4P23634 1241 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 GSTO1P78417 241 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 CTDSPL2Q05D32 466 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 PPARAQ07869 468 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 PPP2R5BQ15173 497 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 TXNRD1Q16881 649 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 TTC6Q86TZ1 520 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 CCDC24Q8N4L8 307 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 WASF1Q92558 559 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 ESR2Q92731 530 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 PANK2Q9BZ23 570 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 GPHNQ9NQX3 736 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-230ENST00000634433 TOMM22Q9NS69 142 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 DDX19AQ9NUU7 478 aaKnown RBP8.31□□□□□ -1.08
BRCA1-230ENST00000634433 ZSWIM5Q9P217 1185 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 SLC12A7Q9Y666 1083 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 NEDD4P46934 1319 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 DTNBO60941 627 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 E2F4Q16254 413 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 UVSSAQ2YD98 709 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 APOA5Q6Q788 366 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 BRAPQ7Z569 592 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 FLAD1Q8NFF5 587 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 NSUN4Q96CB9 384 aaKnown RBP8.31□□□□□ -1.08
BRCA1-230ENST00000634433 TRIM44Q96DX7 344 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-230ENST00000634433 RIOK1Q9BRS2 568 aaKnown RBP8.31□□□□□ -1.08
BRCA1-230ENST00000634433 RBSNQ9H1K0 784 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 LY9Q9HBG7 655 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 ATP8A2Q9NTI2 1148 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 TFCP2L1Q9NZI6 479 aa8.31□□□□□ -1.08
BRCA1-230ENST00000634433 TFIP11Q9UBB9 837 aaKnown RBP8.31□□□□□ -1.08
BRCA1-230ENST00000634433 GOLGA8AA7E2F4 631 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 CREB3O43889 395 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 LDHCP07864 332 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 FDPSP14324 419 aaKnown RBP8.3□□□□□ -1.08
BRCA1-230ENST00000634433 CHAF1AQ13111 956 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-230ENST00000634433 WTAPQ15007 396 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 CRY2Q49AN0 593 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 FBXO18Q8NFZ0 1043 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 UBAC1Q9BSL1 405 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 RCOR1Q9UKL0 485 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 A0A1B0GUL6 1792 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 C4AP0C0L4 1744 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 MINDY4BA8MYZ0 360 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 POLD1P28340 1107 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 MECOMQ03112 1051 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 TRIM29Q14134 588 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 RRP12Q5JTH9 1297 aaKnown RBP8.3□□□□□ -1.08
BRCA1-230ENST00000634433 DZIP1Q86YF9 867 aaKnown RBP8.3□□□□□ -1.08
BRCA1-230ENST00000634433 CRAMP1Q96RY5 1269 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 PPP1R9BQ96SB3 815 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 SPOCK3Q9BQ16 436 aa8.3□□□□□ -1.08
BRCA1-230ENST00000634433 TIAM2Q8IVF5 1701 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 ZBTB7AO95365 584 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 LDHBP07195 334 aaKnown RBP8.29□□□□□ -1.08
BRCA1-230ENST00000634433 HOXA10P31260 410 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-230ENST00000634433 IARSP41252 1262 aaKnown RBP8.29□□□□□ -1.08
BRCA1-230ENST00000634433 SSRP1Q08945 709 aaKnown RBP8.29□□□□□ -1.08
BRCA1-230ENST00000634433 GPR162Q16538 588 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 ZFYVE27Q5T4F4 411 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 C9orf131Q5VYM1 1079 aa8.29□□□□□ -1.08
BRCA1-230ENST00000634433 FAM173BQ6P4H8 233 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms