RNA–Protein interactions for RNA: ENST00000629650.2

PPM1D-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

TSL 5 BASIC

Gene PPM1D, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-204ENST00000629650 SNX21Q969T3 373 aa23.33■■□□□ 1.33
PPM1D-204ENST00000629650 CNNM2Q9H8M5 875 aa23.33■■□□□ 1.33
PPM1D-204ENST00000629650 FAM198AQ9UFP1 575 aa23.33■■□□□ 1.33
PPM1D-204ENST00000629650 CD2BP2O95400 341 aaKnown RBP23.33■■□□□ 1.32
PPM1D-204ENST00000629650 LMOD1P29536 600 aaPredicted RBP23.33■■□□□ 1.32
PPM1D-204ENST00000629650 TCP10Q12799 353 aa23.33■■□□□ 1.32
PPM1D-204ENST00000629650 TBC1D10BQ4KMP7 808 aaPredicted RBP23.33■■□□□ 1.32
PPM1D-204ENST00000629650 KRT23Q9C075 422 aa23.33■■□□□ 1.32
PPM1D-204ENST00000629650 INCENPQ9NQS7 918 aa23.33■■□□□ 1.32
PPM1D-204ENST00000629650 TOMM22Q9NS69 142 aa23.33■■□□□ 1.32
PPM1D-204ENST00000629650 PDRG1Q9NUG6 133 aa23.33■■□□□ 1.32
PPM1D-204ENST00000629650 CLEC11AQ9Y240 323 aa23.33■■□□□ 1.32
PPM1D-204ENST00000629650 TACC3Q9Y6A5 838 aa23.33■■□□□ 1.32
PPM1D-204ENST00000629650 ROBO3Q96MS0 1386 aa23.32■■□□□ 1.32
PPM1D-204ENST00000629650 ENTPD3O75355 529 aa23.32■■□□□ 1.32
PPM1D-204ENST00000629650 EGFRP00533 1210 aa23.32■■□□□ 1.32
PPM1D-204ENST00000629650 PCP11498 1178 aaKnown RBP23.32■■□□□ 1.32
PPM1D-204ENST00000629650 PLCD1P51178 756 aa23.32■■□□□ 1.32
PPM1D-204ENST00000629650 BECN1Q14457 450 aa23.32■■□□□ 1.32
PPM1D-204ENST00000629650 KIF4BQ2VIQ3 1234 aa23.32■■□□□ 1.32
PPM1D-204ENST00000629650 DHX32Q7L7V1 743 aaKnown RBP23.32■■□□□ 1.32
PPM1D-204ENST00000629650 TTC6Q86TZ1 520 aa23.32■■□□□ 1.32
PPM1D-204ENST00000629650 TTC14Q96N46 770 aa23.32■■□□□ 1.32
PPM1D-204ENST00000629650 B4E1Z4 1266 aa23.31■■□□□ 1.32
PPM1D-204ENST00000629650 LDHDQ86WU2 507 aa23.31■■□□□ 1.32
PPM1D-204ENST00000629650 HSCBQ8IWL3 235 aa23.31■■□□□ 1.32
PPM1D-204ENST00000629650 MB21D2Q8IYB1 491 aaPredicted RBP23.31■■□□□ 1.32
PPM1D-204ENST00000629650 TCEANC2Q96MN5 208 aa23.31■■□□□ 1.32
PPM1D-204ENST00000629650 TBC1D2Q9BYX2 928 aa23.31■■□□□ 1.32
PPM1D-204ENST00000629650 VEZTQ9HBM0 779 aa23.31■■□□□ 1.32
PPM1D-204ENST00000629650 TCP10L2B9ZVM9 353 aa23.3■■□□□ 1.32
PPM1D-204ENST00000629650 PDE4BQ07343 736 aa23.3■■□□□ 1.32
PPM1D-204ENST00000629650 RRP12Q5JTH9 1297 aaKnown RBP23.3■■□□□ 1.32
PPM1D-204ENST00000629650 ZFPM1Q8IX07 1006 aa23.3■■□□□ 1.32
PPM1D-204ENST00000629650 FGRP09769 529 aa23.29■■□□□ 1.32
PPM1D-204ENST00000629650 MCM5P33992 734 aa23.29■■□□□ 1.32
PPM1D-204ENST00000629650 AK2P54819 239 aa23.29■■□□□ 1.32
PPM1D-204ENST00000629650 EXOSC10Q01780 885 aaKnown RBP23.29■■□□□ 1.32
PPM1D-204ENST00000629650 FKBP1CQ5VVH2 108 aa23.29■■□□□ 1.32
PPM1D-204ENST00000629650 PNMA8AQ86V59 439 aaPredicted RBP23.29■■□□□ 1.32
PPM1D-204ENST00000629650 DYNLL2Q96FJ2 89 aa23.29■■□□□ 1.32
PPM1D-204ENST00000629650 IPO9Q96P70 1041 aaKnown RBP23.29■■□□□ 1.32
PPM1D-204ENST00000629650 DHX36Q9H2U1 1008 aaKnown RBP23.29■■□□□ 1.32
PPM1D-204ENST00000629650 COL2A1P02458 1487 aaPredicted RBP23.29■■□□□ 1.32
PPM1D-204ENST00000629650 KDM4AO75164 1064 aa23.28■■□□□ 1.32
PPM1D-204ENST00000629650 HLA-DOAP06340 250 aa23.28■■□□□ 1.32
PPM1D-204ENST00000629650 ZSCAN29Q8IWY8 852 aaPredicted RBP23.28■■□□□ 1.32
PPM1D-204ENST00000629650 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.28■■□□□ 1.32
PPM1D-204ENST00000629650 MYH8P13535 1937 aa23.28■■□□□ 1.32
PPM1D-204ENST00000629650 SIPA1L1O43166 1804 aa23.28■■□□□ 1.32
PPM1D-204ENST00000629650 ORC4O43929 436 aa23.28■■□□□ 1.32
PPM1D-204ENST00000629650 PRDM1O75626 825 aa23.28■■□□□ 1.32
PPM1D-204ENST00000629650 MCM2P49736 904 aa23.28■■□□□ 1.32
PPM1D-204ENST00000629650 CHST3Q7LGC8 479 aa23.28■■□□□ 1.32
PPM1D-204ENST00000629650 ESR2Q92731 530 aa23.28■■□□□ 1.32
PPM1D-204ENST00000629650 ALDH8A1Q9H2A2 487 aaPredicted RBP23.28■■□□□ 1.32
PPM1D-204ENST00000629650 PRC1O43663 620 aa23.27■■□□□ 1.32
PPM1D-204ENST00000629650 C16orf86Q6ZW13 317 aa23.27■■□□□ 1.32
PPM1D-204ENST00000629650 NOL8Q76FK4 1167 aaKnown RBP23.27■■□□□ 1.32
PPM1D-204ENST00000629650 CYB5R4Q7L1T6 521 aa23.27■■□□□ 1.32
PPM1D-204ENST00000629650 NKX2-3Q8TAU0 364 aa23.27■■□□□ 1.32
PPM1D-204ENST00000629650 TRPM4Q8TD43 1214 aa23.27■■□□□ 1.32
PPM1D-204ENST00000629650 FAM151AQ8WW52 585 aa23.27■■□□□ 1.32
PPM1D-204ENST00000629650 ZNF287Q9HBT7 754 aa23.27■■□□□ 1.32
PPM1D-204ENST00000629650 WDR19Q8NEZ3 1342 aa23.27■■□□□ 1.32
PPM1D-204ENST00000629650 CNTNAP1P78357 1384 aa23.27■■□□□ 1.31
PPM1D-204ENST00000629650 ATRNL1Q5VV63 1379 aa23.27■■□□□ 1.31
PPM1D-204ENST00000629650 DDTLA6NHG4 134 aaPredicted RBP23.26■■□□□ 1.31
PPM1D-204ENST00000629650 K7ELQ4 463 aaPredicted RBP23.26■■□□□ 1.31
PPM1D-204ENST00000629650 ANTXR2P58335 489 aa23.26■■□□□ 1.31
PPM1D-204ENST00000629650 FGD1P98174 961 aa23.26■■□□□ 1.31
PPM1D-204ENST00000629650 ANKRD1Q15327 319 aa23.26■■□□□ 1.31
PPM1D-204ENST00000629650 MAP1SQ66K74 1059 aaPredicted RBP23.26■■□□□ 1.31
PPM1D-204ENST00000629650 Q6ZUG5 572 aa23.26■■□□□ 1.31
PPM1D-204ENST00000629650 SH3BP5LQ7L8J4 393 aa23.26■■□□□ 1.31
PPM1D-204ENST00000629650 FAM83AQ86UY5 434 aa23.26■■□□□ 1.31
PPM1D-204ENST00000629650 LRRC2Q9BYS8 371 aa23.26■■□□□ 1.31
PPM1D-204ENST00000629650 MKNK2Q9HBH9 465 aa23.26■■□□□ 1.31
PPM1D-204ENST00000629650 ZSWIM5Q9P217 1185 aa23.26■■□□□ 1.31
PPM1D-204ENST00000629650 RANBP6O60518 1105 aaKnown RBP23.25■■□□□ 1.31
PPM1D-204ENST00000629650 TNNI2P48788 182 aa23.25■■□□□ 1.31
PPM1D-204ENST00000629650 DNAJC5GQ8N7S2 189 aa23.25■■□□□ 1.31
PPM1D-204ENST00000629650 SLC44A5Q8NCS7 719 aa23.25■■□□□ 1.31
PPM1D-204ENST00000629650 EHD4Q9H223 541 aa23.25■■□□□ 1.31
PPM1D-204ENST00000629650 ADARB2Q9NS39 739 aaKnown RBP23.25■■□□□ 1.31
PPM1D-204ENST00000629650 PI4KBQ9UBF8 816 aa23.25■■□□□ 1.31
PPM1D-204ENST00000629650 DAXXQ9UER7 740 aaPredicted RBP23.25■■□□□ 1.31
PPM1D-204ENST00000629650 SERPINB13Q9UIV8 391 aa23.25■■□□□ 1.31
PPM1D-204ENST00000629650 CDK8P49336 464 aa23.24■■□□□ 1.31
PPM1D-204ENST00000629650 TNFAIP1Q13829 316 aa23.24■■□□□ 1.31
PPM1D-204ENST00000629650 TOB2Q14106 344 aaPredicted RBP23.24■■□□□ 1.31
PPM1D-204ENST00000629650 ASTN2O75129 1339 aaPredicted RBP23.24■■□□□ 1.31
PPM1D-204ENST00000629650 ITGBL1O95965 494 aaPredicted RBP23.23■■□□□ 1.31
PPM1D-204ENST00000629650 GABPAQ06546 454 aa23.23■■□□□ 1.31
PPM1D-204ENST00000629650 USP50Q70EL3 339 aaPredicted RBP23.23■■□□□ 1.31
PPM1D-204ENST00000629650 SLC4A3P48751 1232 aa23.23■■□□□ 1.31
PPM1D-204ENST00000629650 NT5C2P49902 561 aa23.23■■□□□ 1.31
PPM1D-204ENST00000629650 HIRAP54198 1017 aaPredicted RBP23.23■■□□□ 1.31
PPM1D-204ENST00000629650 ZNF444Q8N0Y2 327 aaPredicted RBP23.23■■□□□ 1.31
PPM1D-204ENST00000629650 CRACR2BQ8N4Y2 399 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms