RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 CCDC105Q8IYK2 499 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 IGSF22Q8N9C0 903 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 TBC1D32Q96NH3 1257 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 IWS1Q96ST2 819 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 DRC3Q9H069 523 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 RIC8AQ9NPQ8 531 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 DDX21Q9NR30 783 aaKnown RBP eCLIP9.9□□□□□ -0.82
GABRB3-216ENST00000628124 HOMER3Q9NSC5 361 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 FAF1Q9UNN5 650 aaPredicted RBP9.9□□□□□ -0.82
GABRB3-216ENST00000628124 TRIM27P14373 513 aa9.9□□□□□ -0.83
GABRB3-216ENST00000628124 CFAP221Q4G0U5 840 aa9.9□□□□□ -0.83
GABRB3-216ENST00000628124 DENND2CQ68D51 928 aa9.9□□□□□ -0.83
GABRB3-216ENST00000628124 GRK7Q8WTQ7 553 aa9.9□□□□□ -0.83
GABRB3-216ENST00000628124 LRRC9Q6ZRR7 1453 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 CASKIN1Q8WXD9 1431 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 HIP1RO75146 1068 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 ESYT1Q9BSJ8 1104 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 CLSTN2Q9H4D0 955 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 XAB2Q9HCS7 855 aaKnown RBP9.89□□□□□ -0.83
GABRB3-216ENST00000628124 KLHL14Q9P2G3 628 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 SPDYE16A6NNV3 312 aaPredicted RBP9.89□□□□□ -0.83
GABRB3-216ENST00000628124 PRPF6O94906 941 aaKnown RBP9.89□□□□□ -0.83
GABRB3-216ENST00000628124 STX2P32856 288 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 SPDYE2Q495Y8 402 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 TMTC1Q8IUR5 882 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 VPS37BQ9H9H4 285 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 MROH2BQ7Z745 1585 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 CD19P15391 556 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 SND1Q7KZF4 910 aaKnown RBP eCLIP9.89□□□□□ -0.83
GABRB3-216ENST00000628124 CCDC84Q86UT8 332 aaPredicted RBP9.89□□□□□ -0.83
GABRB3-216ENST00000628124 PDZD8Q8NEN9 1154 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 NLRP7Q8WX94 980 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 KIF21BO75037 1637 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 S100BP04271 92 aaPredicted RBP9.89□□□□□ -0.83
GABRB3-216ENST00000628124 GSTA1P08263 222 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 GSTA2P09210 222 aa9.89□□□□□ -0.83
GABRB3-216ENST00000628124 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.89□□□□□ -0.83
GABRB3-216ENST00000628124 ARHGAP42A6NI28 874 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 LUC7L3O95232 432 aaKnown RBP9.88□□□□□ -0.83
GABRB3-216ENST00000628124 DNM1Q05193 864 aaKnown RBP9.88□□□□□ -0.83
GABRB3-216ENST00000628124 RPS6KA1Q15418 735 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 TMCO4Q5TGY1 634 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 DHX32Q7L7V1 743 aaKnown RBP9.88□□□□□ -0.83
GABRB3-216ENST00000628124 PALM2Q8IXS6 379 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 CEP104O60308 925 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 GARSP41250 739 aaKnown RBP9.88□□□□□ -0.83
GABRB3-216ENST00000628124 LETM2Q2VYF4 491 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 CSRNP1Q96S65 589 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 SLC5A4Q9NY91 659 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 PNMA2Q9UL42 364 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 ARHGAP6O43182 974 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 NONOQ15233 471 aaKnown RBP eCLIP9.88□□□□□ -0.83
GABRB3-216ENST00000628124 SPOUT1Q5T280 376 aaKnown RBP9.88□□□□□ -0.83
GABRB3-216ENST00000628124 CSGALNACT2Q8N6G5 542 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 RSAD2Q8WXG1 361 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 LRGUKQ96M69 825 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 ZRANB1Q9UGI0 708 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 ORC6Q9Y5N6 252 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 HADHQ16836 314 aaKnown RBP9.88□□□□□ -0.83
GABRB3-216ENST00000628124 LRRC2Q9BYS8 371 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 NIP7Q9Y221 180 aaKnown RBP eCLIP9.88□□□□□ -0.83
GABRB3-216ENST00000628124 GRM8O00222 908 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 TBC1D8O95759 1140 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 LMNB1P20700 586 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 KRT28Q7Z3Y7 464 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 TRIM50Q86XT4 487 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 CTAGE3PQ8IX95 158 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 TRIML1Q8N9V2 468 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 DENND2AQ9ULE3 1009 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 CTNND2Q9UQB3 1225 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 TTLL3Q9Y4R7 772 aa9.88□□□□□ -0.83
GABRB3-216ENST00000628124 PTPDC1A2A3K4 754 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 DEXIO95424 95 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 ATP6V1AP38606 617 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 MAGEA1P43355 309 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 HDAC1Q13547 482 aaPredicted RBP9.87□□□□□ -0.83
GABRB3-216ENST00000628124 PDCD7Q8N8D1 485 aaKnown RBP9.87□□□□□ -0.83
GABRB3-216ENST00000628124 CXorf38Q8TB03 319 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 ZMAT2Q96NC0 199 aaKnown RBP9.87□□□□□ -0.83
GABRB3-216ENST00000628124 KRT12Q99456 494 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 VWA3AA6NCI4 1184 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 OPHN1O60890 802 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 ZBED4O75132 1171 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 ATF7P17544 494 aaPredicted RBP9.87□□□□□ -0.83
GABRB3-216ENST00000628124 PPP2R5BQ15173 497 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 ANKRD20A4Q4UJ75 823 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 ANKRD20A8PQ5CZ79 823 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 ANKRD20A2Q5SQ80 823 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 ANKRD20A1Q5TYW2 823 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 PEX26Q7Z412 305 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 MLKLQ8NB16 471 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 BBOF1Q8ND07 529 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 SNX21Q969T3 373 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 INTS4Q96HW7 963 aaKnown RBP9.87□□□□□ -0.83
GABRB3-216ENST00000628124 USTQ9Y2C2 406 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 AMOTL2Q9Y2J4 779 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 A0A1B0GVL5 298 aa9.87□□□□□ -0.83
GABRB3-216ENST00000628124 PSDA5PKW4 1024 aaPredicted RBP9.87□□□□□ -0.83
GABRB3-216ENST00000628124 RGS16O15492 202 aaPredicted RBP9.87□□□□□ -0.83
GABRB3-216ENST00000628124 GNA14O95837 355 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms