RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 SPDYE4A6NLX3 237 aa13.48□□□□□ -0.25
ATRX-213ENST00000624032 YBX3P16989 372 aaKnown RBP eCLIP13.48□□□□□ -0.25
ATRX-213ENST00000624032 GNAT2P19087 354 aa13.48□□□□□ -0.25
ATRX-213ENST00000624032 CXCL9Q07325 125 aa13.48□□□□□ -0.25
ATRX-213ENST00000624032 SMC3Q9UQE7 1217 aa13.48□□□□□ -0.25
ATRX-213ENST00000624032 GPR75-ASB3A0A0A6YYF3 556 aa13.48□□□□□ -0.25
ATRX-213ENST00000624032 ZNF213O14771 459 aa13.48□□□□□ -0.25
ATRX-213ENST00000624032 CTIFO43310 598 aaKnown RBP13.48□□□□□ -0.25
ATRX-213ENST00000624032 CTDSPL2Q05D32 466 aa13.48□□□□□ -0.25
ATRX-213ENST00000624032 IMMTQ16891 758 aaKnown RBP13.48□□□□□ -0.25
ATRX-213ENST00000624032 NKX2-3Q8TAU0 364 aa13.48□□□□□ -0.25
ATRX-213ENST00000624032 VPS33BQ9H267 617 aa13.48□□□□□ -0.25
ATRX-213ENST00000624032 LIMCH1Q9UPQ0 1083 aa13.48□□□□□ -0.25
ATRX-213ENST00000624032 E7EWF7 191 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 AP5Z1O43299 807 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 ALX1Q15699 326 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 TBC1D10CQ8IV04 446 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 SPC24Q8NBT2 197 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 TGFBRAP1Q8WUH2 860 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 JDP2Q8WYK2 163 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 NOL10Q9BSC4 688 aaKnown RBP13.47□□□□□ -0.25
ATRX-213ENST00000624032 CRNKL1Q9BZJ0 848 aaKnown RBP13.47□□□□□ -0.25
ATRX-213ENST00000624032 SUGT1Q9Y2Z0 365 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 TACC3Q9Y6A5 838 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 GAKO14976 1311 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 MINDY4BA8MYZ0 360 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 BAG3O95817 575 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 CRKP46108 304 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 TSGA10IPQ3SY00 556 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 NACAP1Q9BZK3 213 aa13.47□□□□□ -0.25
ATRX-213ENST00000624032 CCDC192P0DO97 292 aa13.46□□□□□ -0.25
ATRX-213ENST00000624032 CYP2D6P10635 497 aa13.46□□□□□ -0.25
ATRX-213ENST00000624032 RBM5P52756 815 aaKnown RBP eCLIP13.46□□□□□ -0.25
ATRX-213ENST00000624032 PPP4CP60510 307 aa13.46□□□□□ -0.25
ATRX-213ENST00000624032 RSBN1LQ6PCB5 846 aaPredicted RBP13.46□□□□□ -0.25
ATRX-213ENST00000624032 FAM163AQ96GL9 167 aaPredicted RBP13.46□□□□□ -0.25
ATRX-213ENST00000624032 TTC14Q96N46 770 aa13.46□□□□□ -0.25
ATRX-213ENST00000624032 ZSWIM6Q9HCJ5 1215 aa13.46□□□□□ -0.25
ATRX-213ENST00000624032 DCP1AQ9NPI6 582 aaPredicted RBP13.46□□□□□ -0.25
ATRX-213ENST00000624032 VIL1P09327 827 aaKnown RBP13.46□□□□□ -0.25
ATRX-213ENST00000624032 U2AF2P26368 475 aaKnown RBP eCLIP13.46□□□□□ -0.25
ATRX-213ENST00000624032 AK2P54819 239 aa13.46□□□□□ -0.25
ATRX-213ENST00000624032 RHBDL3P58872 404 aa13.46□□□□□ -0.25
ATRX-213ENST00000624032 FKBP1AP62942 108 aaKnown RBP13.46□□□□□ -0.25
ATRX-213ENST00000624032 CHST3Q7LGC8 479 aa13.46□□□□□ -0.25
ATRX-213ENST00000624032 MAPKAPK5Q8IW41 473 aa13.46□□□□□ -0.25
ATRX-213ENST00000624032 SLF2Q8IX21 1173 aa13.46□□□□□ -0.25
ATRX-213ENST00000624032 FEZ1Q99689 392 aa13.46□□□□□ -0.25
ATRX-213ENST00000624032 LTBP3Q9NS15 1303 aa13.46□□□□□ -0.26
ATRX-213ENST00000624032 USP5P45974 858 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 TEX11Q8IYF3 940 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 TEKT1Q969V4 418 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 NEK1Q96PY6 1258 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 LRRC2Q9BYS8 371 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 PSME4Q14997 1843 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 USP17L12C9JPN9 530 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 USP17L21D6R901 530 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 USP17L8P0C7I0 530 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 APOBEC3HQ6NTF7 200 aaKnown RBP13.45□□□□□ -0.26
ATRX-213ENST00000624032 BLOC1S2Q6QNY1 142 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 RUFY3Q7L099 469 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 SAP30BPQ9UHR5 308 aaKnown RBP13.45□□□□□ -0.26
ATRX-213ENST00000624032 CYP46A1Q9Y6A2 500 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 LAMA4Q16363 1823 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 SHTN1A0MZ66 631 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 SOCS7O14512 581 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 CTR9Q6PD62 1173 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 TMED8Q6PL24 325 aaPredicted RBP13.45□□□□□ -0.26
ATRX-213ENST00000624032 TM6SF1Q9BZW5 370 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 PDRG1Q9NUG6 133 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 USP40Q9NVE5 1235 aa13.45□□□□□ -0.26
ATRX-213ENST00000624032 IGSF3O75054 1194 aa13.44□□□□□ -0.26
ATRX-213ENST00000624032 CIAPIN1Q6FI81 312 aa13.44□□□□□ -0.26
ATRX-213ENST00000624032 GMLQ99445 158 aa13.44□□□□□ -0.26
ATRX-213ENST00000624032 CDK5RAP2Q96SN8 1893 aa13.44□□□□□ -0.26
ATRX-213ENST00000624032 RPS6KB1P23443 525 aa13.44□□□□□ -0.26
ATRX-213ENST00000624032 PSMA5P28066 241 aa13.44□□□□□ -0.26
ATRX-213ENST00000624032 CACNB3P54284 484 aa13.44□□□□□ -0.26
ATRX-213ENST00000624032 DNM1Q05193 864 aaKnown RBP13.44□□□□□ -0.26
ATRX-213ENST00000624032 KRT32Q14532 448 aa13.44□□□□□ -0.26
ATRX-213ENST00000624032 CDC42EP5Q6NZY7 148 aa13.44□□□□□ -0.26
ATRX-213ENST00000624032 HHIPL2Q6UWX4 724 aa13.44□□□□□ -0.26
ATRX-213ENST00000624032 MCM9Q9NXL9 1143 aa13.44□□□□□ -0.26
ATRX-213ENST00000624032 A0A0U1RQG5 324 aaPredicted RBP13.43□□□□□ -0.26
ATRX-213ENST00000624032 PPARAQ07869 468 aa13.43□□□□□ -0.26
ATRX-213ENST00000624032 PICALMQ13492 652 aa13.43□□□□□ -0.26
ATRX-213ENST00000624032 ATP8A2Q9NTI2 1148 aa13.43□□□□□ -0.26
ATRX-213ENST00000624032 MKRN1Q9UHC7 482 aaKnown RBP13.43□□□□□ -0.26
ATRX-213ENST00000624032 GJA3Q9Y6H8 435 aa13.43□□□□□ -0.26
ATRX-213ENST00000624032 CFAP100Q494V2 611 aa13.43□□□□□ -0.26
ATRX-213ENST00000624032 FAM200AQ8TCP9 573 aa13.43□□□□□ -0.26
ATRX-213ENST00000624032 OGFRQ9NZT2 677 aa13.43□□□□□ -0.26
ATRX-213ENST00000624032 ZMYM6O95789 1325 aa13.43□□□□□ -0.26
ATRX-213ENST00000624032 NEDD4P46934 1319 aa13.43□□□□□ -0.26
ATRX-213ENST00000624032 ZNF541Q9H0D2 1346 aa13.43□□□□□ -0.26
ATRX-213ENST00000624032 PTGS1P23219 599 aa13.43□□□□□ -0.26
ATRX-213ENST00000624032 SYCP1Q15431 976 aa13.43□□□□□ -0.26
ATRX-213ENST00000624032 ZDHHC15Q96MV8 337 aa13.43□□□□□ -0.26
ATRX-213ENST00000624032 RRP12Q5JTH9 1297 aaKnown RBP13.42□□□□□ -0.26
ATRX-213ENST00000624032 PRMT6Q96LA8 375 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms