RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 XRCC5P13010 732 aaKnown RBP8.74□□□□□ -1.01
MUC1-221ENST00000610359 GCLCP48506 637 aaPredicted RBP8.74□□□□□ -1.01
MUC1-221ENST00000610359 EPHB4P54760 987 aa8.74□□□□□ -1.01
MUC1-221ENST00000610359 MAP3K10Q02779 954 aa8.74□□□□□ -1.01
MUC1-221ENST00000610359 PDE3AQ14432 1141 aa8.74□□□□□ -1.01
MUC1-221ENST00000610359 SH3RF1Q7Z6J0 888 aa8.74□□□□□ -1.01
MUC1-221ENST00000610359 ALYREFQ86V81 257 aaKnown RBP8.74□□□□□ -1.01
MUC1-221ENST00000610359 USP6NLQ92738 828 aa8.74□□□□□ -1.01
MUC1-221ENST00000610359 RUNDC1Q96C34 613 aa8.74□□□□□ -1.01
MUC1-221ENST00000610359 IFT57Q9NWB7 429 aa8.74□□□□□ -1.01
MUC1-221ENST00000610359 MORF4L1Q9UBU8 362 aa8.74□□□□□ -1.01
MUC1-221ENST00000610359 PRKAG2Q9UGJ0 569 aa8.74□□□□□ -1.01
MUC1-221ENST00000610359 PNMA3Q9UL41 463 aa8.74□□□□□ -1.01
MUC1-221ENST00000610359 MAST3O60307 1309 aa8.74□□□□□ -1.01
MUC1-221ENST00000610359 CACNA1AO00555 2505 aa8.73□□□□□ -1.01
MUC1-221ENST00000610359 TRIM43BA6NCK2 446 aa8.73□□□□□ -1.01
MUC1-221ENST00000610359 ZKSCAN1P17029 563 aaPredicted RBP8.73□□□□□ -1.01
MUC1-221ENST00000610359 ITGB8P26012 769 aa8.73□□□□□ -1.01
MUC1-221ENST00000610359 MRPS5P82675 430 aaKnown RBP8.73□□□□□ -1.01
MUC1-221ENST00000610359 DIXDC1Q155Q3 683 aa8.73□□□□□ -1.01
MUC1-221ENST00000610359 CCDC57Q2TAC2 916 aa8.73□□□□□ -1.01
MUC1-221ENST00000610359 PROCA1Q8NCQ7 364 aaPredicted RBP8.73□□□□□ -1.01
MUC1-221ENST00000610359 LINS1Q8NG48 757 aa8.73□□□□□ -1.01
MUC1-221ENST00000610359 TRIM43Q96BQ3 446 aaPredicted RBP8.73□□□□□ -1.01
MUC1-221ENST00000610359 NUDT12Q9BQG2 462 aa8.73□□□□□ -1.01
MUC1-221ENST00000610359 ASCC2Q9H1I8 757 aaPredicted RBP8.73□□□□□ -1.01
MUC1-221ENST00000610359 ZNF576Q9H609 170 aa8.73□□□□□ -1.01
MUC1-221ENST00000610359 EPHX3Q9H6B9 360 aa8.73□□□□□ -1.01
MUC1-221ENST00000610359 MYH16Q9H6N6 1097 aa8.73□□□□□ -1.01
MUC1-221ENST00000610359 TXNRD2Q9NNW7 524 aa8.73□□□□□ -1.01
MUC1-221ENST00000610359 ATP11BQ9Y2G3 1177 aa8.73□□□□□ -1.01
MUC1-221ENST00000610359 SUGT1Q9Y2Z0 365 aa8.73□□□□□ -1.01
MUC1-221ENST00000610359 HCN4Q9Y3Q4 1203 aa8.73□□□□□ -1.01
MUC1-221ENST00000610359 PRRC2BQ5JSZ5 2229 aaKnown RBP8.72□□□□□ -1.01
MUC1-221ENST00000610359 DDTLA6NHG4 134 aaPredicted RBP8.72□□□□□ -1.01
MUC1-221ENST00000610359 CTNND1O60716 968 aaKnown RBP8.72□□□□□ -1.01
MUC1-221ENST00000610359 FRAT2O75474 233 aaPredicted RBP8.72□□□□□ -1.01
MUC1-221ENST00000610359 DNAJB2P25686 324 aa8.72□□□□□ -1.01
MUC1-221ENST00000610359 GNAI1P63096 354 aa8.72□□□□□ -1.01
MUC1-221ENST00000610359 TAF7LQ5H9L4 462 aa8.72□□□□□ -1.01
MUC1-221ENST00000610359 SLC39A5Q6ZMH5 540 aa8.72□□□□□ -1.01
MUC1-221ENST00000610359 VPS37DQ86XT2 251 aa8.72□□□□□ -1.01
MUC1-221ENST00000610359 DNAAF4Q8WXU2 420 aa8.72□□□□□ -1.01
MUC1-221ENST00000610359 PRDM5Q9NQX1 630 aaPredicted RBP8.72□□□□□ -1.01
MUC1-221ENST00000610359 PDLIM7Q9NR12 457 aa8.72□□□□□ -1.01
MUC1-221ENST00000610359 USP40Q9NVE5 1235 aa8.72□□□□□ -1.01
MUC1-221ENST00000610359 FLRT1Q9NZU1 646 aa8.72□□□□□ -1.01
MUC1-221ENST00000610359 BRWD1Q9NSI6 2320 aa8.72□□□□□ -1.01
MUC1-221ENST00000610359 RFX7Q2KHR2 1363 aa8.72□□□□□ -1.01
MUC1-221ENST00000610359 ZNFX1Q9P2E3 1918 aaKnown RBP8.72□□□□□ -1.01
MUC1-221ENST00000610359 TRANK1O15050 2925 aa8.71□□□□□ -1.01
MUC1-221ENST00000610359 CDK5RAP2Q96SN8 1893 aa8.71□□□□□ -1.01
MUC1-221ENST00000610359 BMP1P13497 986 aa8.71□□□□□ -1.02
MUC1-221ENST00000610359 RGS3P49796 1198 aa8.71□□□□□ -1.02
MUC1-221ENST00000610359 HMGCS2P54868 508 aa8.71□□□□□ -1.02
MUC1-221ENST00000610359 SPP2Q13103 211 aa8.71□□□□□ -1.02
MUC1-221ENST00000610359 ADGRE1Q14246 886 aa8.71□□□□□ -1.02
MUC1-221ENST00000610359 CCDC85BQ15834 202 aaPredicted RBP8.71□□□□□ -1.02
MUC1-221ENST00000610359 Q3C1V9 767 aa8.71□□□□□ -1.02
MUC1-221ENST00000610359 TRIM60Q495X7 471 aa8.71□□□□□ -1.02
MUC1-221ENST00000610359 MORN1Q5T089 497 aa8.71□□□□□ -1.02
MUC1-221ENST00000610359 AKNAD1Q5T1N1 836 aa8.71□□□□□ -1.02
MUC1-221ENST00000610359 TRMT44Q8IYL2 757 aaKnown RBP8.71□□□□□ -1.02
MUC1-221ENST00000610359 SOCS4Q8WXH5 440 aa8.71□□□□□ -1.02
MUC1-221ENST00000610359 RNPC3Q96LT9 517 aaKnown RBP8.71□□□□□ -1.02
MUC1-221ENST00000610359 PRDM12Q9H4Q4 367 aa8.71□□□□□ -1.02
MUC1-221ENST00000610359 LRRFIP2Q9Y608 721 aaKnown RBP8.71□□□□□ -1.02
MUC1-221ENST00000610359 SIPA1L1O43166 1804 aa8.7□□□□□ -1.02
MUC1-221ENST00000610359 DNM1LO00429 736 aa8.7□□□□□ -1.02
MUC1-221ENST00000610359 FLIIQ13045 1269 aa8.7□□□□□ -1.02
MUC1-221ENST00000610359 SNX17Q15036 470 aa8.7□□□□□ -1.02
MUC1-221ENST00000610359 CAVIN4Q5BKX8 364 aa8.7□□□□□ -1.02
MUC1-221ENST00000610359 GJC2Q5T442 439 aaPredicted RBP8.7□□□□□ -1.02
MUC1-221ENST00000610359 GPR142Q7Z601 462 aa8.7□□□□□ -1.02
MUC1-221ENST00000610359 VGLL2Q8N8G2 317 aa8.7□□□□□ -1.02
MUC1-221ENST00000610359 TRPV1Q8NER1 839 aa8.7□□□□□ -1.02
MUC1-221ENST00000610359 LPAR1Q92633 364 aa8.7□□□□□ -1.02
MUC1-221ENST00000610359 P2RX7Q99572 595 aaKnown RBP8.7□□□□□ -1.02
MUC1-221ENST00000610359 IDI2Q9BXS1 227 aa8.7□□□□□ -1.02
MUC1-221ENST00000610359 STK31Q9BXU1 1019 aa8.7□□□□□ -1.02
MUC1-221ENST00000610359 PORCNQ9H237 461 aa8.7□□□□□ -1.02
MUC1-221ENST00000610359 C11orf16Q9NQ32 467 aa8.7□□□□□ -1.02
MUC1-221ENST00000610359 DDX4Q9NQI0 724 aaKnown RBP8.7□□□□□ -1.02
MUC1-221ENST00000610359 DDX20Q9UHI6 824 aaKnown RBP8.7□□□□□ -1.02
MUC1-221ENST00000610359 LRRC37A2A6NM11 1700 aa8.69□□□□□ -1.02
MUC1-221ENST00000610359 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.69□□□□□ -1.02
MUC1-221ENST00000610359 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.69□□□□□ -1.02
MUC1-221ENST00000610359 FAM196BA6NMK8 535 aa8.69□□□□□ -1.02
MUC1-221ENST00000610359 ENTPD3O75355 529 aa8.69□□□□□ -1.02
MUC1-221ENST00000610359 PRDX5P30044 214 aa8.69□□□□□ -1.02
MUC1-221ENST00000610359 RGS2P41220 211 aa8.69□□□□□ -1.02
MUC1-221ENST00000610359 RRP1BQ14684 758 aaKnown RBP8.69□□□□□ -1.02
MUC1-221ENST00000610359 LRRC24Q50LG9 513 aa8.69□□□□□ -1.02
MUC1-221ENST00000610359 SH3D19Q5HYK7 790 aa8.69□□□□□ -1.02
MUC1-221ENST00000610359 ZNF280CQ8ND82 737 aa8.69□□□□□ -1.02
MUC1-221ENST00000610359 GPRC5AQ8NFJ5 357 aa8.69□□□□□ -1.02
MUC1-221ENST00000610359 TIFAQ96CG3 184 aa8.69□□□□□ -1.02
MUC1-221ENST00000610359 KAZALD1Q96I82 304 aa8.69□□□□□ -1.02
MUC1-221ENST00000610359 GAS2L1Q99501 681 aaPredicted RBP8.69□□□□□ -1.02
MUC1-221ENST00000610359 APBA2Q99767 749 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms