RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 TREML2Q5T2D2 321 aa19.51■□□□□ 0.71
HDDC2-210ENST00000609574 CRISPLD2Q9H0B8 497 aa19.51■□□□□ 0.71
HDDC2-210ENST00000609574 HMX1Q9NP08 348 aaPredicted RBP19.51■□□□□ 0.71
HDDC2-210ENST00000609574 RAI14Q9P0K7 980 aa19.51■□□□□ 0.71
HDDC2-210ENST00000609574 SRGAP3O43295 1099 aa19.5■□□□□ 0.71
HDDC2-210ENST00000609574 TFCP2Q12800 502 aa19.5■□□□□ 0.71
HDDC2-210ENST00000609574 CCAR1Q8IX12 1150 aaKnown RBP19.5■□□□□ 0.71
HDDC2-210ENST00000609574 TRIM34Q9BYJ4 488 aa19.5■□□□□ 0.71
HDDC2-210ENST00000609574 NBPF3Q9H094 633 aa19.5■□□□□ 0.71
HDDC2-210ENST00000609574 TMOD4Q9NZQ9 345 aa19.5■□□□□ 0.71
HDDC2-210ENST00000609574 RPTORQ8N122 1335 aa19.5■□□□□ 0.71
HDDC2-210ENST00000609574 MYH13Q9UKX3 1938 aa19.49■□□□□ 0.71
HDDC2-210ENST00000609574 CAP2P40123 477 aa19.49■□□□□ 0.71
HDDC2-210ENST00000609574 HMGCS2P54868 508 aa19.49■□□□□ 0.71
HDDC2-210ENST00000609574 IRX3P78415 501 aaPredicted RBP19.49■□□□□ 0.71
HDDC2-210ENST00000609574 CCDC84Q86UT8 332 aaPredicted RBP19.49■□□□□ 0.71
HDDC2-210ENST00000609574 SPATA5Q8NB90 893 aa19.49■□□□□ 0.71
HDDC2-210ENST00000609574 LRP2BPQ9P2M1 347 aa19.49■□□□□ 0.71
HDDC2-210ENST00000609574 HERC5Q9UII4 1024 aaKnown RBP19.49■□□□□ 0.71
HDDC2-210ENST00000609574 BAG3O95817 575 aa19.48■□□□□ 0.71
HDDC2-210ENST00000609574 RHBDL3P58872 404 aa19.48■□□□□ 0.71
HDDC2-210ENST00000609574 TEX11Q8IYF3 940 aa19.48■□□□□ 0.71
HDDC2-210ENST00000609574 ASCC2Q9H1I8 757 aaPredicted RBP19.48■□□□□ 0.71
HDDC2-210ENST00000609574 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.48■□□□□ 0.71
HDDC2-210ENST00000609574 RFX7Q2KHR2 1363 aa19.47■□□□□ 0.71
HDDC2-210ENST00000609574 DLL1O00548 723 aa19.47■□□□□ 0.71
HDDC2-210ENST00000609574 SLURP2P0DP57 97 aa19.47■□□□□ 0.71
HDDC2-210ENST00000609574 G3BP1Q13283 466 aaKnown RBP eCLIP19.47■□□□□ 0.71
HDDC2-210ENST00000609574 TRMT44Q8IYL2 757 aaKnown RBP19.47■□□□□ 0.71
HDDC2-210ENST00000609574 C7orf61Q8IZ16 206 aa19.47■□□□□ 0.71
HDDC2-210ENST00000609574 DHX36Q9H2U1 1008 aaKnown RBP19.47■□□□□ 0.71
HDDC2-210ENST00000609574 PI4KBQ9UBF8 816 aa19.47■□□□□ 0.71
HDDC2-210ENST00000609574 FAM196BA6NMK8 535 aa19.46■□□□□ 0.71
HDDC2-210ENST00000609574 UQCRFS1P1P0C7P4 283 aa19.46■□□□□ 0.71
HDDC2-210ENST00000609574 PLCG2P16885 1265 aa19.46■□□□□ 0.71
HDDC2-210ENST00000609574 BMP8BP34820 402 aa19.46■□□□□ 0.71
HDDC2-210ENST00000609574 PDE3AQ14432 1141 aa19.46■□□□□ 0.71
HDDC2-210ENST00000609574 NSUN4Q96CB9 384 aaKnown RBP19.46■□□□□ 0.71
HDDC2-210ENST00000609574 MEIS3Q99687 375 aa19.46■□□□□ 0.71
HDDC2-210ENST00000609574 C11orf49Q9H6J7 331 aa19.46■□□□□ 0.71
HDDC2-210ENST00000609574 CWC22Q9HCG8 908 aaKnown RBP19.46■□□□□ 0.71
HDDC2-210ENST00000609574 HMG20BQ9P0W2 317 aa19.46■□□□□ 0.71
HDDC2-210ENST00000609574 ASNSP08243 561 aa19.45■□□□□ 0.7
HDDC2-210ENST00000609574 SH3D19Q5HYK7 790 aa19.45■□□□□ 0.7
HDDC2-210ENST00000609574 TBC1D9Q6ZT07 1266 aa19.45■□□□□ 0.7
HDDC2-210ENST00000609574 GPRC5AQ8NFJ5 357 aa19.45■□□□□ 0.7
HDDC2-210ENST00000609574 CDCA7LQ96GN5 454 aa19.45■□□□□ 0.7
HDDC2-210ENST00000609574 NUDT12Q9BQG2 462 aa19.45■□□□□ 0.7
HDDC2-210ENST00000609574 GJD2Q9UKL4 321 aa19.45■□□□□ 0.7
HDDC2-210ENST00000609574 RANBP2P49792 3224 aaKnown RBP19.45■□□□□ 0.7
HDDC2-210ENST00000609574 SZT2Q5T011 3432 aa19.45■□□□□ 0.7
HDDC2-210ENST00000609574 C19orf81C9J6K1 198 aa19.44■□□□□ 0.7
HDDC2-210ENST00000609574 IPO8O15397 1037 aaKnown RBP19.44■□□□□ 0.7
HDDC2-210ENST00000609574 CRACR2BQ8N4Y2 399 aaPredicted RBP19.44■□□□□ 0.7
HDDC2-210ENST00000609574 DIS3LQ8TF46 1054 aaKnown RBP19.44■□□□□ 0.7
HDDC2-210ENST00000609574 SOCS4Q8WXH5 440 aa19.44■□□□□ 0.7
HDDC2-210ENST00000609574 MORF4L1Q9UBU8 362 aa19.44■□□□□ 0.7
HDDC2-210ENST00000609574 ZMYND8Q9ULU4 1186 aaPredicted RBP19.44■□□□□ 0.7
HDDC2-210ENST00000609574 MYH2Q9UKX2 1941 aa19.44■□□□□ 0.7
HDDC2-210ENST00000609574 CYP2B6P20813 491 aa19.43■□□□□ 0.7
HDDC2-210ENST00000609574 BACE1P56817 501 aa19.43■□□□□ 0.7
HDDC2-210ENST00000609574 GPR153Q6NV75 609 aa19.43■□□□□ 0.7
HDDC2-210ENST00000609574 ATF7IPQ6VMQ6 1270 aa19.43■□□□□ 0.7
HDDC2-210ENST00000609574 FOXP4Q8IVH2 680 aaPredicted RBP19.43■□□□□ 0.7
HDDC2-210ENST00000609574 ARHGAP45Q92619 1136 aa19.43■□□□□ 0.7
HDDC2-210ENST00000609574 WDR18Q9BV38 432 aa19.43■□□□□ 0.7
HDDC2-210ENST00000609574 GINM1Q9NU53 330 aa19.43■□□□□ 0.7
HDDC2-210ENST00000609574 DOCK2Q92608 1830 aa19.43■□□□□ 0.7
HDDC2-210ENST00000609574 MGAMO43451 1857 aa19.43■□□□□ 0.7
HDDC2-210ENST00000609574 GNAI2P04899 355 aa19.42■□□□□ 0.7
HDDC2-210ENST00000609574 MAPK4P31152 587 aa19.42■□□□□ 0.7
HDDC2-210ENST00000609574 MTMR2Q13614 643 aa19.42■□□□□ 0.7
HDDC2-210ENST00000609574 CCDC158Q5M9N0 1113 aa19.42■□□□□ 0.7
HDDC2-210ENST00000609574 NAA16Q6N069 864 aaPredicted RBP19.42■□□□□ 0.7
HDDC2-210ENST00000609574 GTF3C2Q8WUA4 911 aaPredicted RBP19.42■□□□□ 0.7
HDDC2-210ENST00000609574 LRCH3Q96II8 777 aa19.42■□□□□ 0.7
HDDC2-210ENST00000609574 GDF15Q99988 308 aa19.42■□□□□ 0.7
HDDC2-210ENST00000609574 COL2A1P02458 1487 aaPredicted RBP19.41■□□□□ 0.7
HDDC2-210ENST00000609574 SOX1O00570 391 aaPredicted RBP19.41■□□□□ 0.7
HDDC2-210ENST00000609574 XRCC5P13010 732 aaKnown RBP19.41■□□□□ 0.7
HDDC2-210ENST00000609574 ARID4AP29374 1257 aaPredicted RBP19.41■□□□□ 0.7
HDDC2-210ENST00000609574 HOXA7P31268 230 aaPredicted RBP19.41■□□□□ 0.7
HDDC2-210ENST00000609574 MTX1Q13505 466 aa19.41■□□□□ 0.7
HDDC2-210ENST00000609574 SH3RF3Q8TEJ3 882 aaPredicted RBP19.41■□□□□ 0.7
HDDC2-210ENST00000609574 P2RX7Q99572 595 aaKnown RBP19.41■□□□□ 0.7
HDDC2-210ENST00000609574 OGDHLQ9ULD0 1010 aa19.41■□□□□ 0.7
HDDC2-210ENST00000609574 DOCK1Q14185 1865 aa19.4■□□□□ 0.7
HDDC2-210ENST00000609574 USP17L10C9JJH3 530 aa19.4■□□□□ 0.7
HDDC2-210ENST00000609574 GLRX3O76003 335 aaKnown RBP19.4■□□□□ 0.7
HDDC2-210ENST00000609574 HLA-DOAP06340 250 aa19.4■□□□□ 0.7
HDDC2-210ENST00000609574 PRKAR2AP13861 404 aaKnown RBP19.4■□□□□ 0.7
HDDC2-210ENST00000609574 ZKSCAN1P17029 563 aaPredicted RBP19.4■□□□□ 0.7
HDDC2-210ENST00000609574 TTC39AQ5SRH9 613 aa19.4■□□□□ 0.7
HDDC2-210ENST00000609574 TRMT2AQ8IZ69 625 aaKnown RBP19.4■□□□□ 0.7
HDDC2-210ENST00000609574 DEFB123Q8N688 67 aa19.4■□□□□ 0.7
HDDC2-210ENST00000609574 ZNF384Q8TF68 577 aa19.4■□□□□ 0.7
HDDC2-210ENST00000609574 AATFQ9NY61 560 aaKnown RBP eCLIP19.4■□□□□ 0.7
HDDC2-210ENST00000609574 SYN1P17600 705 aa19.39■□□□□ 0.69
HDDC2-210ENST00000609574 RGS2P41220 211 aa19.39■□□□□ 0.69
HDDC2-210ENST00000609574 HERVK_113P62684 666 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms