RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 FAM177A1Q8N128 213 aaPredicted RBP25.53■■□□□ 1.68
SHANK2-220ENST00000608988 STK11IPQ8N1F8 1099 aa25.53■■□□□ 1.68
SHANK2-220ENST00000608988 IQUBQ8NA54 791 aa25.53■■□□□ 1.68
SHANK2-220ENST00000608988 SPATA20Q8TB22 786 aa25.53■■□□□ 1.68
SHANK2-220ENST00000608988 CCDC12Q8WUD4 166 aaPredicted RBP25.53■■□□□ 1.68
SHANK2-220ENST00000608988 CCDC51Q96ER9 411 aa25.53■■□□□ 1.68
SHANK2-220ENST00000608988 RBM33Q96EV2 1170 aaKnown RBP25.53■■□□□ 1.68
SHANK2-220ENST00000608988 RAB21Q9UL25 225 aa25.53■■□□□ 1.68
SHANK2-220ENST00000608988 ERLIN1O75477 346 aa25.53■■□□□ 1.68
SHANK2-220ENST00000608988 IFNAR1P17181 557 aa25.53■■□□□ 1.68
SHANK2-220ENST00000608988 SCARF1Q14162 830 aa25.53■■□□□ 1.68
SHANK2-220ENST00000608988 MSANTD4Q8NCY6 345 aa25.53■■□□□ 1.68
SHANK2-220ENST00000608988 GOLGA5Q8TBA6 731 aa25.53■■□□□ 1.68
SHANK2-220ENST00000608988 LY9Q9HBG7 655 aa25.53■■□□□ 1.68
SHANK2-220ENST00000608988 KCPQ6ZWJ8 1503 aa25.52■■□□□ 1.68
SHANK2-220ENST00000608988 KIF5CO60282 957 aa25.52■■□□□ 1.68
SHANK2-220ENST00000608988 MMP1P03956 469 aa25.52■■□□□ 1.68
SHANK2-220ENST00000608988 CSB-PGBD3P0DP91 1061 aa25.52■■□□□ 1.68
SHANK2-220ENST00000608988 CHMP4BP1P59074 171 aa25.52■■□□□ 1.68
SHANK2-220ENST00000608988 FMR1Q06787 632 aaKnown RBP eCLIP25.52■■□□□ 1.68
SHANK2-220ENST00000608988 PHKBQ93100 1093 aa25.52■■□□□ 1.68
SHANK2-220ENST00000608988 MTA3Q9BTC8 594 aa25.52■■□□□ 1.68
SHANK2-220ENST00000608988 CDC23Q9UJX2 597 aa25.52■■□□□ 1.68
SHANK2-220ENST00000608988 CSF1RP07333 972 aa25.51■■□□□ 1.67
SHANK2-220ENST00000608988 ADKP55263 362 aaKnown RBP25.51■■□□□ 1.67
SHANK2-220ENST00000608988 NFXL1Q6ZNB6 911 aa25.51■■□□□ 1.67
SHANK2-220ENST00000608988 CTAGE1Q96RT6 745 aa25.51■■□□□ 1.67
SHANK2-220ENST00000608988 FAM217BQ9NTX9 383 aaPredicted RBP25.51■■□□□ 1.67
SHANK2-220ENST00000608988 TIAM2Q8IVF5 1701 aa25.51■■□□□ 1.67
SHANK2-220ENST00000608988 ERVV-2B6SEH9 535 aa25.51■■□□□ 1.67
SHANK2-220ENST00000608988 RANBP6O60518 1105 aaKnown RBP25.51■■□□□ 1.67
SHANK2-220ENST00000608988 EIF3JO75822 258 aaKnown RBP25.51■■□□□ 1.67
SHANK2-220ENST00000608988 RCAN1P53805 252 aa25.51■■□□□ 1.67
SHANK2-220ENST00000608988 RAD51AP2Q09MP3 1159 aa25.51■■□□□ 1.67
SHANK2-220ENST00000608988 PPFIBP1Q86W92 1011 aa25.51■■□□□ 1.67
SHANK2-220ENST00000608988 NEK11Q8NG66 645 aa25.51■■□□□ 1.67
SHANK2-220ENST00000608988 CNNM2Q9H8M5 875 aa25.51■■□□□ 1.67
SHANK2-220ENST00000608988 SRPRBQ9Y5M8 271 aaKnown RBP25.51■■□□□ 1.67
SHANK2-220ENST00000608988 PCCAP05165 728 aaPredicted RBP25.5■■□□□ 1.67
SHANK2-220ENST00000608988 CAPN2P17655 700 aa25.5■■□□□ 1.67
SHANK2-220ENST00000608988 FECHP22830 423 aa25.5■■□□□ 1.67
SHANK2-220ENST00000608988 TAF7LQ5H9L4 462 aa25.5■■□□□ 1.67
SHANK2-220ENST00000608988 TMEM67Q5HYA8 995 aa25.5■■□□□ 1.67
SHANK2-220ENST00000608988 HDXQ7Z353 690 aa25.5■■□□□ 1.67
SHANK2-220ENST00000608988 MICU3Q86XE3 530 aa25.5■■□□□ 1.67
SHANK2-220ENST00000608988 GBP3Q9H0R5 595 aa25.5■■□□□ 1.67
SHANK2-220ENST00000608988 ADGRG1Q9Y653 693 aa25.5■■□□□ 1.67
SHANK2-220ENST00000608988 RIC1Q4ADV7 1423 aa25.5■■□□□ 1.67
SHANK2-220ENST00000608988 AKAP11Q9UKA4 1901 aa25.5■■□□□ 1.67
SHANK2-220ENST00000608988 ST5P78524 1137 aa25.49■■□□□ 1.67
SHANK2-220ENST00000608988 SERTAD1Q9UHV2 236 aa25.49■■□□□ 1.67
SHANK2-220ENST00000608988 SLC12A7Q9Y666 1083 aa25.49■■□□□ 1.67
SHANK2-220ENST00000608988 IFIT5Q13325 482 aaKnown RBP25.49■■□□□ 1.67
SHANK2-220ENST00000608988 TCIRG1Q13488 830 aa25.49■■□□□ 1.67
SHANK2-220ENST00000608988 ZSCAN26Q16670 478 aa25.49■■□□□ 1.67
SHANK2-220ENST00000608988 SPATA1Q5VX52 437 aa25.49■■□□□ 1.67
SHANK2-220ENST00000608988 TRIM22Q8IYM9 498 aa25.49■■□□□ 1.67
SHANK2-220ENST00000608988 ZBTB3Q9H5J0 574 aa25.49■■□□□ 1.67
SHANK2-220ENST00000608988 POLR2DO15514 142 aaKnown RBP25.48■■□□□ 1.67
SHANK2-220ENST00000608988 ACTN4O43707 911 aaKnown RBP25.48■■□□□ 1.67
SHANK2-220ENST00000608988 RASGRP2Q7LDG7 609 aa25.48■■□□□ 1.67
SHANK2-220ENST00000608988 SLC26A6Q9BXS9 759 aa25.48■■□□□ 1.67
SHANK2-220ENST00000608988 MRPL44Q9H9J2 332 aaKnown RBP25.48■■□□□ 1.67
SHANK2-220ENST00000608988 MYO1AQ9UBC5 1043 aa25.48■■□□□ 1.67
SHANK2-220ENST00000608988 TTF2Q9UNY4 1162 aaKnown RBP25.48■■□□□ 1.67
SHANK2-220ENST00000608988 ITIH6Q6UXX5 1313 aa25.47■■□□□ 1.67
SHANK2-220ENST00000608988 B4E1Z4 1266 aa25.47■■□□□ 1.67
SHANK2-220ENST00000608988 FOXN1O15353 648 aa25.47■■□□□ 1.67
SHANK2-220ENST00000608988 PBX1P40424 430 aa25.47■■□□□ 1.67
SHANK2-220ENST00000608988 SLC9C2Q5TAH2 1124 aa25.47■■□□□ 1.67
SHANK2-220ENST00000608988 EPC1Q9H2F5 836 aa25.47■■□□□ 1.67
SHANK2-220ENST00000608988 MCAMP43121 646 aa25.47■■□□□ 1.67
SHANK2-220ENST00000608988 TOB1P50616 345 aaPredicted RBP25.47■■□□□ 1.67
SHANK2-220ENST00000608988 FILIP1LQ4L180 1135 aa25.47■■□□□ 1.67
SHANK2-220ENST00000608988 CNGA4Q8IV77 575 aa25.47■■□□□ 1.67
SHANK2-220ENST00000608988 DIS3L2Q8IYB7 885 aaKnown RBP25.47■■□□□ 1.67
SHANK2-220ENST00000608988 KRT23Q9C075 422 aa25.47■■□□□ 1.67
SHANK2-220ENST00000608988 FEZ2Q9UHY8 353 aaPredicted RBP25.47■■□□□ 1.67
SHANK2-220ENST00000608988 ADAM21Q9UKJ8 722 aa25.47■■□□□ 1.67
SHANK2-220ENST00000608988 CDHR2Q9BYE9 1310 aa25.46■■□□□ 1.67
SHANK2-220ENST00000608988 PRR29P0C7W0 189 aa25.46■■□□□ 1.67
SHANK2-220ENST00000608988 KARSQ15046 597 aaKnown RBP25.46■■□□□ 1.67
SHANK2-220ENST00000608988 HSP90AB3PQ58FF7 597 aa25.46■■□□□ 1.67
SHANK2-220ENST00000608988 TNS2Q63HR2 1409 aa25.46■■□□□ 1.67
SHANK2-220ENST00000608988 PCDH11XQ9BZA7 1347 aa25.45■■□□□ 1.67
SHANK2-220ENST00000608988 PCDH11YQ9BZA8 1340 aa25.45■■□□□ 1.67
SHANK2-220ENST00000608988 CCDC196A0A1B0GTZ2 297 aa25.45■■□□□ 1.67
SHANK2-220ENST00000608988 IVLP07476 585 aa25.45■■□□□ 1.67
SHANK2-220ENST00000608988 UQCRFS1P1P0C7P4 283 aa25.45■■□□□ 1.67
SHANK2-220ENST00000608988 WHAMMP3Q1A5X7 153 aa25.45■■□□□ 1.67
SHANK2-220ENST00000608988 BEND6Q5SZJ8 279 aaPredicted RBP25.45■■□□□ 1.67
SHANK2-220ENST00000608988 RIPOR2Q9Y4F9 1068 aa25.45■■□□□ 1.67
SHANK2-220ENST00000608988 RPS6KA5O75582 802 aa25.45■■□□□ 1.66
SHANK2-220ENST00000608988 DEXIO95424 95 aa25.45■■□□□ 1.66
SHANK2-220ENST00000608988 A1BGP04217 495 aa25.45■■□□□ 1.66
SHANK2-220ENST00000608988 APPP05067 770 aa25.45■■□□□ 1.66
SHANK2-220ENST00000608988 CDKAL1Q5VV42 579 aa25.45■■□□□ 1.66
SHANK2-220ENST00000608988 APTXQ7Z2E3 356 aaKnown RBP25.45■■□□□ 1.66
SHANK2-220ENST00000608988 IGSF22Q8N9C0 903 aa25.45■■□□□ 1.66
SHANK2-220ENST00000608988 DESI2Q9BSY9 194 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms