RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 ORC4O43929 436 aa17.96■□□□□ 0.47
DDX39A-211ENST00000590239 PDE4BQ07343 736 aa17.96■□□□□ 0.47
DDX39A-211ENST00000590239 TRDNQ13061 729 aa17.96■□□□□ 0.47
DDX39A-211ENST00000590239 ANGEL2Q5VTE6 544 aaKnown RBP17.96■□□□□ 0.47
DDX39A-211ENST00000590239 SH3BP5LQ7L8J4 393 aa17.96■□□□□ 0.47
DDX39A-211ENST00000590239 PNMA8AQ86V59 439 aaPredicted RBP17.96■□□□□ 0.47
DDX39A-211ENST00000590239 FOXP4Q8IVH2 680 aaPredicted RBP17.96■□□□□ 0.47
DDX39A-211ENST00000590239 ZSCAN29Q8IWY8 852 aaPredicted RBP17.96■□□□□ 0.47
DDX39A-211ENST00000590239 NCOA7Q8NI08 942 aa17.96■□□□□ 0.47
DDX39A-211ENST00000590239 ZC3H15Q8WU90 426 aaKnown RBP17.96■□□□□ 0.47
DDX39A-211ENST00000590239 KRT23Q9C075 422 aa17.96■□□□□ 0.47
DDX39A-211ENST00000590239 ZNF287Q9HBT7 754 aa17.96■□□□□ 0.47
DDX39A-211ENST00000590239 PI4KBQ9UBF8 816 aa17.96■□□□□ 0.47
DDX39A-211ENST00000590239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.96■□□□□ 0.47
DDX39A-211ENST00000590239 DDTLA6NHG4 134 aaPredicted RBP17.95■□□□□ 0.46
DDX39A-211ENST00000590239 CASTP20810 708 aaKnown RBP17.95■□□□□ 0.46
DDX39A-211ENST00000590239 RASA3Q14644 834 aa17.95■□□□□ 0.46
DDX39A-211ENST00000590239 C16orf86Q6ZW13 317 aa17.95■□□□□ 0.46
DDX39A-211ENST00000590239 RALYLQ86SE5 291 aaKnown RBP17.95■□□□□ 0.46
DDX39A-211ENST00000590239 METTL16Q86W50 562 aaKnown RBP17.95■□□□□ 0.46
DDX39A-211ENST00000590239 GGA3Q9NZ52 723 aa17.95■□□□□ 0.46
DDX39A-211ENST00000590239 SWAP70Q9UH65 585 aa17.95■□□□□ 0.46
DDX39A-211ENST00000590239 PGAP2Q9UHJ9 254 aa17.95■□□□□ 0.46
DDX39A-211ENST00000590239 SERPINB13Q9UIV8 391 aa17.95■□□□□ 0.46
DDX39A-211ENST00000590239 PPP2R3BQ9Y5P8 575 aa17.95■□□□□ 0.46
DDX39A-211ENST00000590239 SMIM22K7EJ46 135 aa17.94■□□□□ 0.46
DDX39A-211ENST00000590239 VEGFAP15692 232 aaPredicted RBP17.94■□□□□ 0.46
DDX39A-211ENST00000590239 EVX2Q03828 476 aa17.94■□□□□ 0.46
DDX39A-211ENST00000590239 GABPAQ06546 454 aa17.94■□□□□ 0.46
DDX39A-211ENST00000590239 SLC4A8Q2Y0W8 1093 aa17.94■□□□□ 0.46
DDX39A-211ENST00000590239 BLOC1S2Q6QNY1 142 aa17.94■□□□□ 0.46
DDX39A-211ENST00000590239 RUFY3Q7L099 469 aa17.94■□□□□ 0.46
DDX39A-211ENST00000590239 DEFB129Q9H1M3 183 aa17.94■□□□□ 0.46
DDX39A-211ENST00000590239 RBM19Q9Y4C8 960 aaKnown RBP17.94■□□□□ 0.46
DDX39A-211ENST00000590239 CYP46A1Q9Y6A2 500 aa17.94■□□□□ 0.46
DDX39A-211ENST00000590239 TACC3Q9Y6A5 838 aa17.94■□□□□ 0.46
DDX39A-211ENST00000590239 RPS6KB1P23443 525 aa17.93■□□□□ 0.46
DDX39A-211ENST00000590239 DHX32Q7L7V1 743 aaKnown RBP17.93■□□□□ 0.46
DDX39A-211ENST00000590239 ESR2Q92731 530 aa17.93■□□□□ 0.46
DDX39A-211ENST00000590239 DCPSQ96C86 337 aaKnown RBP17.93■□□□□ 0.46
DDX39A-211ENST00000590239 DYNLL2Q96FJ2 89 aa17.93■□□□□ 0.46
DDX39A-211ENST00000590239 CSRNP1Q96S65 589 aa17.93■□□□□ 0.46
DDX39A-211ENST00000590239 TMEM39BQ9GZU3 492 aa17.93■□□□□ 0.46
DDX39A-211ENST00000590239 NEDD4P46934 1319 aa17.93■□□□□ 0.46
DDX39A-211ENST00000590239 WDR19Q8NEZ3 1342 aa17.93■□□□□ 0.46
DDX39A-211ENST00000590239 MCM5P33992 734 aa17.92■□□□□ 0.46
DDX39A-211ENST00000590239 CDK8P49336 464 aa17.92■□□□□ 0.46
DDX39A-211ENST00000590239 NEK4P51957 841 aa17.92■□□□□ 0.46
DDX39A-211ENST00000590239 MB21D2Q8IYB1 491 aaPredicted RBP17.92■□□□□ 0.46
DDX39A-211ENST00000590239 CRACR2BQ8N4Y2 399 aaPredicted RBP17.92■□□□□ 0.46
DDX39A-211ENST00000590239 TEPSINQ96N21 525 aa17.92■□□□□ 0.46
DDX39A-211ENST00000590239 UPF3BQ9BZI7 483 aaKnown RBP17.92■□□□□ 0.46
DDX39A-211ENST00000590239 MKNK2Q9HBH9 465 aa17.92■□□□□ 0.46
DDX39A-211ENST00000590239 INCENPQ9NQS7 918 aa17.92■□□□□ 0.46
DDX39A-211ENST00000590239 HERC5Q9UII4 1024 aaKnown RBP17.92■□□□□ 0.46
DDX39A-211ENST00000590239 B4E1Z4 1266 aa17.91■□□□□ 0.46
DDX39A-211ENST00000590239 TBC1D12O60347 775 aa17.91■□□□□ 0.46
DDX39A-211ENST00000590239 EXOSC10Q01780 885 aaKnown RBP17.91■□□□□ 0.46
DDX39A-211ENST00000590239 STK11IPQ8N1F8 1099 aa17.91■□□□□ 0.46
DDX39A-211ENST00000590239 HOOK2Q96ED9 719 aa17.91■□□□□ 0.46
DDX39A-211ENST00000590239 TRIM34Q9BYJ4 488 aa17.91■□□□□ 0.46
DDX39A-211ENST00000590239 ALDH8A1Q9H2A2 487 aaPredicted RBP17.91■□□□□ 0.46
DDX39A-211ENST00000590239 TOMM22Q9NS69 142 aa17.91■□□□□ 0.46
DDX39A-211ENST00000590239 ST18O60284 1047 aa17.9■□□□□ 0.46
DDX39A-211ENST00000590239 KDM4AO75164 1064 aa17.9■□□□□ 0.46
DDX39A-211ENST00000590239 RASA1P20936 1047 aa17.9■□□□□ 0.46
DDX39A-211ENST00000590239 MAP3K10Q02779 954 aa17.9■□□□□ 0.46
DDX39A-211ENST00000590239 RRP12Q5JTH9 1297 aaKnown RBP17.9■□□□□ 0.46
DDX39A-211ENST00000590239 SULF1Q8IWU6 871 aa17.9■□□□□ 0.46
DDX39A-211ENST00000590239 ZNF444Q8N0Y2 327 aaPredicted RBP17.9■□□□□ 0.46
DDX39A-211ENST00000590239 SLC44A5Q8NCS7 719 aa17.9■□□□□ 0.46
DDX39A-211ENST00000590239 MTA3Q9BTC8 594 aa17.9■□□□□ 0.46
DDX39A-211ENST00000590239 RRAGCQ9HB90 399 aa17.9■□□□□ 0.46
DDX39A-211ENST00000590239 PDRG1Q9NUG6 133 aa17.9■□□□□ 0.46
DDX39A-211ENST00000590239 ZSWIM5Q9P217 1185 aa17.9■□□□□ 0.46
DDX39A-211ENST00000590239 SIPA1L1O43166 1804 aa17.89■□□□□ 0.45
DDX39A-211ENST00000590239 PRC1O43663 620 aa17.89■□□□□ 0.45
DDX39A-211ENST00000590239 RANBP6O60518 1105 aaKnown RBP17.89■□□□□ 0.45
DDX39A-211ENST00000590239 PRDM1O75626 825 aa17.89■□□□□ 0.45
DDX39A-211ENST00000590239 CPA1P15085 419 aa17.89■□□□□ 0.45
DDX39A-211ENST00000590239 SHMT1P34896 483 aa17.89■□□□□ 0.45
DDX39A-211ENST00000590239 EAPPQ56P03 285 aaPredicted RBP17.89■□□□□ 0.45
DDX39A-211ENST00000590239 TATDN1Q6P1N9 297 aa17.89■□□□□ 0.45
DDX39A-211ENST00000590239 FBXL16Q8N461 479 aa17.89■□□□□ 0.45
DDX39A-211ENST00000590239 CCDC17Q96LX7 622 aa17.89■□□□□ 0.45
DDX39A-211ENST00000590239 TTC14Q96N46 770 aa17.89■□□□□ 0.45
DDX39A-211ENST00000590239 ANP32AP39687 249 aaKnown RBP17.88■□□□□ 0.45
DDX39A-211ENST00000590239 ANTXR2P58335 489 aa17.88■□□□□ 0.45
DDX39A-211ENST00000590239 COL9A3Q14050 684 aaPredicted RBP17.88■□□□□ 0.45
DDX39A-211ENST00000590239 CYB5R4Q7L1T6 521 aa17.88■□□□□ 0.45
DDX39A-211ENST00000590239 KRT26Q7Z3Y9 468 aa17.88■□□□□ 0.45
DDX39A-211ENST00000590239 CDAN1Q8IWY9 1227 aa17.88■□□□□ 0.45
DDX39A-211ENST00000590239 SNX21Q969T3 373 aa17.88■□□□□ 0.45
DDX39A-211ENST00000590239 TMEM87BQ96K49 555 aa17.88■□□□□ 0.45
DDX39A-211ENST00000590239 DNAJC18Q9H819 358 aa17.88■□□□□ 0.45
DDX39A-211ENST00000590239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.88■□□□□ 0.45
DDX39A-211ENST00000590239 SCAF8Q9UPN6 1271 aaKnown RBP17.88■□□□□ 0.45
DDX39A-211ENST00000590239 MCM2P49736 904 aa17.87■□□□□ 0.45
DDX39A-211ENST00000590239 TFAP4Q01664 338 aa17.87■□□□□ 0.45
DDX39A-211ENST00000590239 SART3Q15020 963 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms