RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	TTC41P	Q6P2S7	1318 aa		20.98	■□□□□ 0.95
MBD1-221	ENST00000589867	PTPRF	P10586	1907 aa		20.98	■□□□□ 0.95
MBD1-221	ENST00000589867	MAGEB6P1	A0A0J9YX57	407 aa		20.97	■□□□□ 0.95
MBD1-221	ENST00000589867	JAG1	P78504	1218 aa		20.97	■□□□□ 0.95
MBD1-221	ENST00000589867	EVX2	Q03828	476 aa		20.97	■□□□□ 0.95
MBD1-221	ENST00000589867	PPAT	Q06203	517 aa		20.97	■□□□□ 0.95
MBD1-221	ENST00000589867	SCYL3	Q8IZE3	742 aa		20.97	■□□□□ 0.95
MBD1-221	ENST00000589867	DHX36	Q9H2U1	1008 aa	Known RBP	20.97	■□□□□ 0.95
MBD1-221	ENST00000589867	PI4KB	Q9UBF8	816 aa		20.97	■□□□□ 0.95
MBD1-221	ENST00000589867	KCNH4	Q9UQ05	1017 aa		20.97	■□□□□ 0.95
MBD1-221	ENST00000589867	ATAD5	Q96QE3	1844 aa		20.97	■□□□□ 0.95
MBD1-221	ENST00000589867	CTNND1	O60716	968 aa	Known RBP	20.96	■□□□□ 0.95
MBD1-221	ENST00000589867	PTPRA	P18433	802 aa		20.96	■□□□□ 0.95
MBD1-221	ENST00000589867	UBE3C	Q15386	1083 aa		20.96	■□□□□ 0.95
MBD1-221	ENST00000589867	SHROOM1	Q2M3G4	852 aa	Predicted RBP	20.96	■□□□□ 0.95
MBD1-221	ENST00000589867	CCDC84	Q86UT8	332 aa	Predicted RBP	20.96	■□□□□ 0.95
MBD1-221	ENST00000589867	CERS3	Q8IU89	383 aa		20.96	■□□□□ 0.95
MBD1-221	ENST00000589867	KBTBD3	Q8NAB2	608 aa		20.96	■□□□□ 0.95
MBD1-221	ENST00000589867	ARMT1	Q9H993	441 aa		20.96	■□□□□ 0.95
MBD1-221	ENST00000589867	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	20.96	■□□□□ 0.95
MBD1-221	ENST00000589867	STAP2	Q9UGK3	403 aa		20.96	■□□□□ 0.95
MBD1-221	ENST00000589867	NAV1	Q8NEY1	1877 aa		20.96	■□□□□ 0.95
MBD1-221	ENST00000589867	CCL15-CCL14	A0A0B4J2E2	113 aa		20.95	■□□□□ 0.94
MBD1-221	ENST00000589867	PRKAB2	O43741	272 aa		20.95	■□□□□ 0.94
MBD1-221	ENST00000589867	MX1	P20591	662 aa		20.95	■□□□□ 0.94
MBD1-221	ENST00000589867	GTF2A2	P52657	109 aa		20.95	■□□□□ 0.94
MBD1-221	ENST00000589867	CCL15	Q16663	113 aa		20.95	■□□□□ 0.94
MBD1-221	ENST00000589867	SLC4A8	Q2Y0W8	1093 aa		20.95	■□□□□ 0.94
MBD1-221	ENST00000589867	FAM43A	Q8N2R8	423 aa		20.95	■□□□□ 0.94
MBD1-221	ENST00000589867	PUS7L	Q9H0K6	701 aa	Known RBP	20.95	■□□□□ 0.94
MBD1-221	ENST00000589867	RWDD1	Q9H446	243 aa	Predicted RBP	20.95	■□□□□ 0.94
MBD1-221	ENST00000589867	USP5	P45974	858 aa		20.94	■□□□□ 0.94
MBD1-221	ENST00000589867	SDR42E1	Q8WUS8	393 aa		20.94	■□□□□ 0.94
MBD1-221	ENST00000589867	GPATCH3	Q96I76	525 aa		20.94	■□□□□ 0.94
MBD1-221	ENST00000589867	HERC5	Q9UII4	1024 aa	Known RBP	20.94	■□□□□ 0.94
MBD1-221	ENST00000589867	AFG3L2	Q9Y4W6	797 aa		20.94	■□□□□ 0.94
MBD1-221	ENST00000589867	BAZ2A	Q9UIF9	1905 aa	Known RBP	20.94	■□□□□ 0.94
MBD1-221	ENST00000589867	MBD4	O95243	580 aa		20.93	■□□□□ 0.94
MBD1-221	ENST00000589867	CAP2	P40123	477 aa		20.93	■□□□□ 0.94
MBD1-221	ENST00000589867	PLCD1	P51178	756 aa		20.93	■□□□□ 0.94
MBD1-221	ENST00000589867	PDE1A	P54750	535 aa		20.93	■□□□□ 0.94
MBD1-221	ENST00000589867	SNAPC2	Q13487	334 aa		20.93	■□□□□ 0.94
MBD1-221	ENST00000589867	FOXP4	Q8IVH2	680 aa	Predicted RBP	20.93	■□□□□ 0.94
MBD1-221	ENST00000589867	TNS4	Q8IZW8	715 aa		20.93	■□□□□ 0.94
MBD1-221	ENST00000589867	OSBP2	Q969R2	916 aa		20.93	■□□□□ 0.94
MBD1-221	ENST00000589867	LNPK	Q9C0E8	428 aa		20.93	■□□□□ 0.94
MBD1-221	ENST00000589867	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	20.93	■□□□□ 0.94	4e-7	■■■■□ 25
MBD1-221	ENST00000589867	DCP1A	Q9NPI6	582 aa	Predicted RBP	20.93	■□□□□ 0.94
MBD1-221	ENST00000589867	BTBD19	C9JJ37	291 aa		20.92	■□□□□ 0.94
MBD1-221	ENST00000589867	SMIM22	K7EJ46	135 aa		20.92	■□□□□ 0.94
MBD1-221	ENST00000589867	GPR25	O00155	361 aa		20.92	■□□□□ 0.94
MBD1-221	ENST00000589867	GLRX3	O76003	335 aa	Known RBP	20.92	■□□□□ 0.94
MBD1-221	ENST00000589867	ALDH1A1	P00352	501 aa		20.92	■□□□□ 0.94
MBD1-221	ENST00000589867	CRHR2	Q13324	411 aa		20.92	■□□□□ 0.94
MBD1-221	ENST00000589867	NOM1	Q5C9Z4	860 aa	Known RBP	20.92	■□□□□ 0.94
MBD1-221	ENST00000589867	ZNF296	Q8WUU4	475 aa	Predicted RBP	20.92	■□□□□ 0.94
MBD1-221	ENST00000589867	ZHX2	Q9Y6X8	837 aa		20.92	■□□□□ 0.94
MBD1-221	ENST00000589867	CETP	P11597	493 aa		20.91	■□□□□ 0.94
MBD1-221	ENST00000589867	CAP1	Q01518	475 aa		20.91	■□□□□ 0.94
MBD1-221	ENST00000589867	NUCB1	Q02818	461 aa		20.91	■□□□□ 0.94
MBD1-221	ENST00000589867	GABPA	Q06546	454 aa		20.91	■□□□□ 0.94
MBD1-221	ENST00000589867	B4GALNT3	Q6L9W6	998 aa		20.91	■□□□□ 0.94
MBD1-221	ENST00000589867	CRNKL1	Q9BZJ0	848 aa	Known RBP	20.91	■□□□□ 0.94
MBD1-221	ENST00000589867	CXCL11	O14625	94 aa		20.9	■□□□□ 0.94
MBD1-221	ENST00000589867	ERC2	O15083	957 aa		20.9	■□□□□ 0.94
MBD1-221	ENST00000589867	CYP2D6	P10635	497 aa		20.9	■□□□□ 0.94
MBD1-221	ENST00000589867	GPAT2	Q6NUI2	795 aa		20.9	■□□□□ 0.94
MBD1-221	ENST00000589867	EHD4	Q9H223	541 aa		20.9	■□□□□ 0.94
MBD1-221	ENST00000589867	PICK1	Q9NRD5	415 aa		20.9	■□□□□ 0.94
MBD1-221	ENST00000589867		A0A0G2JLL6	359 aa	Predicted RBP	20.89	■□□□□ 0.93
MBD1-221	ENST00000589867	RNF113A	O15541	343 aa	Known RBP	20.89	■□□□□ 0.93
MBD1-221	ENST00000589867	TATDN1	Q6P1N9	297 aa		20.89	■□□□□ 0.93
MBD1-221	ENST00000589867	PRRT2	Q7Z6L0	340 aa	Predicted RBP	20.89	■□□□□ 0.93
MBD1-221	ENST00000589867	CHD1L	Q86WJ1	897 aa		20.89	■□□□□ 0.93
MBD1-221	ENST00000589867	STRBP	Q96SI9	672 aa	Known RBP	20.89	■□□□□ 0.93
MBD1-221	ENST00000589867	HLA-DOA	P06340	250 aa		20.88	■□□□□ 0.93
MBD1-221	ENST00000589867	ZSCAN25	Q6NSZ9	544 aa		20.88	■□□□□ 0.93
MBD1-221	ENST00000589867	PLEKHM2	Q8IWE5	1019 aa		20.88	■□□□□ 0.93
MBD1-221	ENST00000589867	APPBP2	Q92624	585 aa		20.88	■□□□□ 0.93
MBD1-221	ENST00000589867	HTT	P42858	3142 aa		20.87	■□□□□ 0.93
MBD1-221	ENST00000589867		M0R2C6	588 aa		20.87	■□□□□ 0.93
MBD1-221	ENST00000589867	GDF11	O95390	407 aa		20.87	■□□□□ 0.93
MBD1-221	ENST00000589867	SHMT1	P34896	483 aa		20.87	■□□□□ 0.93
MBD1-221	ENST00000589867	SEC62	Q99442	399 aa	Known RBP	20.87	■□□□□ 0.93
MBD1-221	ENST00000589867	MCM9	Q9NXL9	1143 aa		20.87	■□□□□ 0.93
MBD1-221	ENST00000589867	SERPINB13	Q9UIV8	391 aa		20.87	■□□□□ 0.93
MBD1-221	ENST00000589867	ADGRA2	Q96PE1	1338 aa		20.86	■□□□□ 0.93
MBD1-221	ENST00000589867	CYP2D7	A0A087X1C5	515 aa		20.86	■□□□□ 0.93
MBD1-221	ENST00000589867	OTUD7B	Q6GQQ9	843 aa		20.86	■□□□□ 0.93
MBD1-221	ENST00000589867	ANKRD23	Q86SG2	305 aa		20.86	■□□□□ 0.93
MBD1-221	ENST00000589867	TTC6	Q86TZ1	520 aa		20.86	■□□□□ 0.93
MBD1-221	ENST00000589867	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	20.86	■□□□□ 0.93
MBD1-221	ENST00000589867	ZCCHC17	Q9NP64	241 aa	Known RBP	20.86	■□□□□ 0.93
MBD1-221	ENST00000589867	ATP8A2	Q9NTI2	1148 aa		20.86	■□□□□ 0.93
MBD1-221	ENST00000589867	LOC285556	D6RIA3	1793 aa		20.85	■□□□□ 0.93
MBD1-221	ENST00000589867	TRIM75P	A6NK02	468 aa		20.85	■□□□□ 0.93
MBD1-221	ENST00000589867	GSG1L2	A8MUP6	293 aa		20.85	■□□□□ 0.93
MBD1-221	ENST00000589867	FKTN	O75072	461 aa		20.85	■□□□□ 0.93
MBD1-221	ENST00000589867	ZFY	P08048	801 aa	Predicted RBP	20.85	■□□□□ 0.93
MBD1-221	ENST00000589867	SPP2	Q13103	211 aa		20.85	■□□□□ 0.93

Retrieved 100 of 20,778 RNA–protein pairs in 1500.9 ms