RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 SRGAP3O43295 1099 aa14.72□□□□□ -0.05
BRCA1-225ENST00000586385 RARSP54136 660 aaKnown RBP14.72□□□□□ -0.05
BRCA1-225ENST00000586385 HMGCS2P54868 508 aa14.72□□□□□ -0.05
BRCA1-225ENST00000586385 TRIM32Q13049 653 aa14.72□□□□□ -0.05
BRCA1-225ENST00000586385 MVPQ14764 893 aaKnown RBP14.72□□□□□ -0.05
BRCA1-225ENST00000586385 SLF2Q8IX21 1173 aa14.72□□□□□ -0.05
BRCA1-225ENST00000586385 PROCA1Q8NCQ7 364 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-225ENST00000586385 OSBPL5Q9H0X9 879 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-225ENST00000586385 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.72□□□□□ -0.05
BRCA1-225ENST00000586385 NR2E3Q9Y5X4 410 aa14.72□□□□□ -0.05
BRCA1-225ENST00000586385 PEX10O60683 326 aa14.71□□□□□ -0.05
BRCA1-225ENST00000586385 TFRCP02786 760 aaKnown RBP14.71□□□□□ -0.05
BRCA1-225ENST00000586385 CT47B1P0C2W7 299 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-225ENST00000586385 ARID4AP29374 1257 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-225ENST00000586385 CAP2P40123 477 aa14.71□□□□□ -0.05
BRCA1-225ENST00000586385 MCAMP43121 646 aa14.71□□□□□ -0.05
BRCA1-225ENST00000586385 SHROOM1Q2M3G4 852 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-225ENST00000586385 SPATA5Q8NB90 893 aa14.71□□□□□ -0.05
BRCA1-225ENST00000586385 ZNF280CQ8ND82 737 aa14.71□□□□□ -0.05
BRCA1-225ENST00000586385 PAWRQ96IZ0 340 aaKnown RBP14.71□□□□□ -0.05
BRCA1-225ENST00000586385 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.71□□□□□ -0.05
BRCA1-225ENST00000586385 TAOK2Q9UL54 1235 aa14.71□□□□□ -0.05
BRCA1-225ENST00000586385 AKAP2Q9Y2D5 859 aa14.71□□□□□ -0.05
BRCA1-225ENST00000586385 DOCK3Q8IZD9 2030 aa14.71□□□□□ -0.05
BRCA1-225ENST00000586385 PNMA6EA0A0J9YXQ4 647 aa14.7□□□□□ -0.06
BRCA1-225ENST00000586385 SH3D19Q5HYK7 790 aa14.7□□□□□ -0.06
BRCA1-225ENST00000586385 COA7Q96BR5 231 aa14.7□□□□□ -0.06
BRCA1-225ENST00000586385 LRCH3Q96II8 777 aa14.7□□□□□ -0.06
BRCA1-225ENST00000586385 NEUROD6Q96NK8 337 aa14.7□□□□□ -0.06
BRCA1-225ENST00000586385 ASCC2Q9H1I8 757 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-225ENST00000586385 DNAJC18Q9H819 358 aa14.7□□□□□ -0.06
BRCA1-225ENST00000586385 STAP2Q9UGK3 403 aa14.7□□□□□ -0.06
BRCA1-225ENST00000586385 LOC285556D6RIA3 1793 aa14.7□□□□□ -0.06
BRCA1-225ENST00000586385 EVI5O60447 810 aa14.69□□□□□ -0.06
BRCA1-225ENST00000586385 POTEEQ6S8J3 1075 aa14.69□□□□□ -0.06
BRCA1-225ENST00000586385 SH3RF3Q8TEJ3 882 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-225ENST00000586385 PNMA3Q9UL41 463 aa14.69□□□□□ -0.06
BRCA1-225ENST00000586385 HDAC5Q9UQL6 1122 aa14.69□□□□□ -0.06
BRCA1-225ENST00000586385 ALPK3Q96L96 1907 aa14.68□□□□□ -0.06
BRCA1-225ENST00000586385 LAMA3Q16787 3333 aa14.68□□□□□ -0.06
BRCA1-225ENST00000586385 A0A1W2PPC1 479 aa14.68□□□□□ -0.06
BRCA1-225ENST00000586385 USP17L5A8MUK1 530 aa14.68□□□□□ -0.06
BRCA1-225ENST00000586385 MAP4K4O95819 1239 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-225ENST00000586385 GNAI3P08754 354 aa14.68□□□□□ -0.06
BRCA1-225ENST00000586385 GCLCP48506 637 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-225ENST00000586385 ADGRA1Q86SQ6 560 aa14.68□□□□□ -0.06
BRCA1-225ENST00000586385 TEX11Q8IYF3 940 aa14.68□□□□□ -0.06
BRCA1-225ENST00000586385 TRIB2Q92519 343 aa14.68□□□□□ -0.06
BRCA1-225ENST00000586385 ARHGAP45Q92619 1136 aa14.68□□□□□ -0.06
BRCA1-225ENST00000586385 GDF15Q99988 308 aa14.68□□□□□ -0.06
BRCA1-225ENST00000586385 TXNRD2Q9NNW7 524 aa14.68□□□□□ -0.06
BRCA1-225ENST00000586385 RAI14Q9P0K7 980 aa14.68□□□□□ -0.06
BRCA1-225ENST00000586385 MORF4L1Q9UBU8 362 aa14.68□□□□□ -0.06
BRCA1-225ENST00000586385 SIPA1L1O43166 1804 aa14.68□□□□□ -0.06
BRCA1-225ENST00000586385 HMGCRP04035 888 aa14.67□□□□□ -0.06
BRCA1-225ENST00000586385 LDHCP07864 332 aa14.67□□□□□ -0.06
BRCA1-225ENST00000586385 CAPN2P17655 700 aa14.67□□□□□ -0.06
BRCA1-225ENST00000586385 GSTO1P78417 241 aa14.67□□□□□ -0.06
BRCA1-225ENST00000586385 MTMR2Q13614 643 aa14.67□□□□□ -0.06
BRCA1-225ENST00000586385 MAP3K21Q5TCX8 1036 aa14.67□□□□□ -0.06
BRCA1-225ENST00000586385 METTL16Q86W50 562 aaKnown RBP14.67□□□□□ -0.06
BRCA1-225ENST00000586385 WDR18Q9BV38 432 aa14.67□□□□□ -0.06
BRCA1-225ENST00000586385 TRIM27P14373 513 aa14.66□□□□□ -0.06
BRCA1-225ENST00000586385 NECAB2Q7Z6G3 386 aa14.66□□□□□ -0.06
BRCA1-225ENST00000586385 P2RX7Q99572 595 aaKnown RBP14.66□□□□□ -0.06
BRCA1-225ENST00000586385 TBC1D2Q9BYX2 928 aa14.66□□□□□ -0.06
BRCA1-225ENST00000586385 SNRKQ9NRH2 765 aa14.66□□□□□ -0.06
BRCA1-225ENST00000586385 HERC5Q9UII4 1024 aaKnown RBP14.66□□□□□ -0.06
BRCA1-225ENST00000586385 ZMYND8Q9ULU4 1186 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-225ENST00000586385 PLXNB2O15031 1838 aa14.66□□□□□ -0.06
BRCA1-225ENST00000586385 HOXA7P31268 230 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-225ENST00000586385 BACE1P56817 501 aa14.65□□□□□ -0.06
BRCA1-225ENST00000586385 PPP4CP60510 307 aa14.65□□□□□ -0.06
BRCA1-225ENST00000586385 C7orf61Q8IZ16 206 aa14.65□□□□□ -0.06
BRCA1-225ENST00000586385 ANKLE1Q8NAG6 615 aa14.65□□□□□ -0.06
BRCA1-225ENST00000586385 AATFQ9NY61 560 aaKnown RBP eCLIP14.65□□□□□ -0.06
BRCA1-225ENST00000586385 PI4KBQ9UBF8 816 aa14.65□□□□□ -0.06
BRCA1-225ENST00000586385 RBPJLQ9UBG7 517 aa14.65□□□□□ -0.06
BRCA1-225ENST00000586385 OGDHLQ9ULD0 1010 aa14.65□□□□□ -0.06
BRCA1-225ENST00000586385 FLT1P17948 1338 aa14.65□□□□□ -0.06
BRCA1-225ENST00000586385 RPTORQ8N122 1335 aa14.65□□□□□ -0.06
BRCA1-225ENST00000586385 CYP2E1P05181 493 aaPredicted RBP14.64□□□□□ -0.07
BRCA1-225ENST00000586385 UQCRFS1P1P0C7P4 283 aa14.64□□□□□ -0.07
BRCA1-225ENST00000586385 BMP8BP34820 402 aa14.64□□□□□ -0.07
BRCA1-225ENST00000586385 PABPC4Q13310 644 aaKnown RBP eCLIP14.64□□□□□ -0.07
BRCA1-225ENST00000586385 Q3C1V9 767 aa14.64□□□□□ -0.07
BRCA1-225ENST00000586385 GORABQ5T7V8 394 aa14.64□□□□□ -0.07
BRCA1-225ENST00000586385 MAPKAPK5Q8IW41 473 aa14.64□□□□□ -0.07
BRCA1-225ENST00000586385 USP6NLQ92738 828 aa14.64□□□□□ -0.07
BRCA1-225ENST00000586385 DBNDD2Q9BQY9 259 aa14.64□□□□□ -0.07
BRCA1-225ENST00000586385 HMX1Q9NP08 348 aaPredicted RBP14.64□□□□□ -0.07
BRCA1-225ENST00000586385 LRP2BPQ9P2M1 347 aa14.64□□□□□ -0.07
BRCA1-225ENST00000586385 PFASO15067 1338 aa14.64□□□□□ -0.07
BRCA1-225ENST00000586385 BCAR3O75815 825 aa14.63□□□□□ -0.07
BRCA1-225ENST00000586385 GDF11O95390 407 aa14.63□□□□□ -0.07
BRCA1-225ENST00000586385 GNAI2P04899 355 aa14.63□□□□□ -0.07
BRCA1-225ENST00000586385 CYP2B6P20813 491 aa14.63□□□□□ -0.07
BRCA1-225ENST00000586385 HERVK_113P62684 666 aa14.63□□□□□ -0.07
BRCA1-225ENST00000586385 POLA2Q14181 598 aa14.63□□□□□ -0.07
BRCA1-225ENST00000586385 NAA16Q6N069 864 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms