RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 ONECUT3O60422 494 aaPredicted RBP15.71■□□□□ 0.11
GGA3-214ENST00000582717 H2AFXP16104 143 aaPredicted RBP15.71■□□□□ 0.11
GGA3-214ENST00000582717 SFPQP23246 707 aaKnown RBP eCLIP15.71■□□□□ 0.11
GGA3-214ENST00000582717 SEPT12Q8IYM1 358 aa15.71■□□□□ 0.11
GGA3-214ENST00000582717 PPP1R13BQ96KQ4 1090 aa15.71■□□□□ 0.11
GGA3-214ENST00000582717 GNL3LQ9NVN8 582 aaKnown RBP15.71■□□□□ 0.11
GGA3-214ENST00000582717 KIAA1468Q9P260 1216 aa15.71■□□□□ 0.11
GGA3-214ENST00000582717 ABCF2Q9UG63 623 aa15.71■□□□□ 0.11
GGA3-214ENST00000582717 SLC4A4Q9Y6R1 1079 aa15.71■□□□□ 0.11
GGA3-214ENST00000582717 CYP7A1P22680 504 aa15.7■□□□□ 0.1
GGA3-214ENST00000582717 E4F1Q66K89 784 aaPredicted RBP15.7■□□□□ 0.1
GGA3-214ENST00000582717 TPTE2Q6XPS3 522 aa15.7■□□□□ 0.1
GGA3-214ENST00000582717 CERKQ8TCT0 537 aa15.7■□□□□ 0.1
GGA3-214ENST00000582717 KCNG4Q8TDN1 519 aa15.7■□□□□ 0.1
GGA3-214ENST00000582717 PODXL2Q9NZ53 605 aa15.7■□□□□ 0.1
GGA3-214ENST00000582717 MYH13Q9UKX3 1938 aa15.7■□□□□ 0.1
GGA3-214ENST00000582717 YEATS4O95619 227 aa15.7■□□□□ 0.1
GGA3-214ENST00000582717 CAVIN4Q5BKX8 364 aa15.7■□□□□ 0.1
GGA3-214ENST00000582717 FAM196AQ6ZSG2 479 aa15.7■□□□□ 0.1
GGA3-214ENST00000582717 LRRC4BQ9NT99 713 aa15.7■□□□□ 0.1
GGA3-214ENST00000582717 RAI14Q9P0K7 980 aa15.7■□□□□ 0.1
GGA3-214ENST00000582717 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.7■□□□□ 0.19e-6■■□□□ 14.3
GGA3-214ENST00000582717 PCDHA7Q9UN72 937 aa15.7■□□□□ 0.1
GGA3-214ENST00000582717 V9GYY5 206 aaPredicted RBP15.7■□□□□ 0.1
GGA3-214ENST00000582717 GNAT2P19087 354 aa15.69■□□□□ 0.1
GGA3-214ENST00000582717 TM4SF1P30408 202 aa15.69■□□□□ 0.1
GGA3-214ENST00000582717 CCDC93Q567U6 631 aa15.69■□□□□ 0.1
GGA3-214ENST00000582717 ILDR1Q86SU0 546 aaPredicted RBP15.69■□□□□ 0.1
GGA3-214ENST00000582717 RFC4P35249 363 aa15.69■□□□□ 0.1
GGA3-214ENST00000582717 TDO2P48775 406 aa15.69■□□□□ 0.1
GGA3-214ENST00000582717 OTUD7BQ6GQQ9 843 aa15.69■□□□□ 0.1
GGA3-214ENST00000582717 FBXO33Q7Z6M2 555 aa15.69■□□□□ 0.1
GGA3-214ENST00000582717 VPS37DQ86XT2 251 aa15.69■□□□□ 0.1
GGA3-214ENST00000582717 IGDCC4Q8TDY8 1250 aa15.69■□□□□ 0.1
GGA3-214ENST00000582717 TRPC5Q9UL62 973 aaPredicted RBP15.69■□□□□ 0.1
GGA3-214ENST00000582717 DHX16O60231 1041 aaKnown RBP15.68■□□□□ 0.1
GGA3-214ENST00000582717 SMC2O95347 1197 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 RXRAP19793 462 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 AKNAD1Q5T1N1 836 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 TRAPPC3LQ5T215 181 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 TMC6Q7Z403 805 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 LINC00301Q8NCQ3 95 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 TMEM87BQ96K49 555 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 XPO4Q9C0E2 1151 aaKnown RBP15.68■□□□□ 0.1
GGA3-214ENST00000582717 LY9Q9HBG7 655 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 ORC3Q9UBD5 711 aaPredicted RBP15.68■□□□□ 0.1
GGA3-214ENST00000582717 ECM29Q5VYK3 1845 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 CPLX1O14810 134 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 ARMCX5Q6P1M9 558 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 APOA5Q6Q788 366 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 SLC51AQ86UW1 340 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 ZNF384Q8TF68 577 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 NACAP1Q9BZK3 213 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 POLR3EQ9NVU0 708 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 IFNKQ9P0W0 207 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 ZSWIM5Q9P217 1185 aa15.68■□□□□ 0.1
GGA3-214ENST00000582717 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.68■□□□□ 0.15e-7■■■□□ 15.3
GGA3-214ENST00000582717 UBR3Q6ZT12 1888 aa15.67■□□□□ 0.1
GGA3-214ENST00000582717 PHLPP2Q6ZVD8 1323 aa15.67■□□□□ 0.1
GGA3-214ENST00000582717 NLRP12P59046 1061 aa15.67■□□□□ 0.1
GGA3-214ENST00000582717 NFIXQ14938 502 aa15.67■□□□□ 0.1
GGA3-214ENST00000582717 STK38Q15208 465 aa15.67■□□□□ 0.1
GGA3-214ENST00000582717 SF3A1Q15459 793 aaKnown RBP15.67■□□□□ 0.1
GGA3-214ENST00000582717 DPCR1Q3MIW9 517 aa15.67■□□□□ 0.1
GGA3-214ENST00000582717 RGS22Q8NE09 1264 aa15.67■□□□□ 0.1
GGA3-214ENST00000582717 SDR42E1Q8WUS8 393 aa15.67■□□□□ 0.1
GGA3-214ENST00000582717 SRRTQ9BXP5 876 aaKnown RBP15.67■□□□□ 0.1
GGA3-214ENST00000582717 BCL11BQ9C0K0 894 aaPredicted RBP15.67■□□□□ 0.1
GGA3-214ENST00000582717 ZNF446Q9NWS9 450 aa15.67■□□□□ 0.1
GGA3-214ENST00000582717 TFCP2L1Q9NZI6 479 aa15.67■□□□□ 0.1
GGA3-214ENST00000582717 A0A087WWV3 80 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 MAGEB6P1A0A0J9YX57 407 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 IKBKBO14920 756 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 SLC3A2P08195 630 aaKnown RBP15.66■□□□□ 0.1
GGA3-214ENST00000582717 METAP2P50579 478 aaKnown RBP eCLIP15.66■□□□□ 0.1
GGA3-214ENST00000582717 NDUFA8P51970 172 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 TMEM67Q5HYA8 995 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 BRAPQ7Z569 592 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 STAG1Q8WVM7 1258 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 RIOK1Q9BRS2 568 aaKnown RBP15.66■□□□□ 0.1
GGA3-214ENST00000582717 GJB4Q9NTQ9 266 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 A0A1B0GVL5 298 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 CDC27P30260 824 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 SYT10Q6XYQ8 523 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 MFSD6Q6ZSS7 791 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 MICU3Q86XE3 530 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 STK11IPQ8N1F8 1099 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 C8orf76Q96K31 380 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 ANKRD2Q9GZV1 360 aa15.66■□□□□ 0.1
GGA3-214ENST00000582717 ARGLU1Q9NWB6 273 aaPredicted RBP15.66■□□□□ 0.1
GGA3-214ENST00000582717 BAZ2AQ9UIF9 1905 aaKnown RBP15.65■□□□□ 0.1
GGA3-214ENST00000582717 NPHP1O15259 732 aa15.65■□□□□ 0.1
GGA3-214ENST00000582717 ETF1P62495 437 aaKnown RBP15.65■□□□□ 0.1
GGA3-214ENST00000582717 DYNLL1P63167 89 aaKnown RBP15.65■□□□□ 0.1
GGA3-214ENST00000582717 SGMS1Q86VZ5 419 aa15.65■□□□□ 0.1
GGA3-214ENST00000582717 MYL10Q9BUA6 226 aa15.65■□□□□ 0.1
GGA3-214ENST00000582717 KRT23Q9C075 422 aa15.65■□□□□ 0.1
GGA3-214ENST00000582717 CNNM2Q9H8M5 875 aa15.65■□□□□ 0.1
GGA3-214ENST00000582717 CALCOCO1Q9P1Z2 691 aa15.65■□□□□ 0.1
GGA3-214ENST00000582717 EP400Q96L91 3159 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms