RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 FRMPD3Q5JV73 1810 aa14.07□□□□□ -0.16
SUPT4H1-203ENST00000579289 TBC1D12O60347 775 aa14.07□□□□□ -0.16
SUPT4H1-203ENST00000579289 IGHA2P01877 340 aa14.07□□□□□ -0.16
SUPT4H1-203ENST00000579289 CACNB2Q08289 660 aaPredicted RBP14.07□□□□□ -0.16
SUPT4H1-203ENST00000579289 SH3D19Q5HYK7 790 aa14.07□□□□□ -0.16
SUPT4H1-203ENST00000579289 ASCC2Q9H1I8 757 aaPredicted RBP14.07□□□□□ -0.16
SUPT4H1-203ENST00000579289 SEMA6BQ9H3T3 888 aa14.07□□□□□ -0.16
SUPT4H1-203ENST00000579289 TAOK2Q9UL54 1235 aa14.07□□□□□ -0.16
SUPT4H1-203ENST00000579289 FRAT2O75474 233 aaPredicted RBP14.06□□□□□ -0.16
SUPT4H1-203ENST00000579289 XRCC5P13010 732 aaKnown RBP14.06□□□□□ -0.16
SUPT4H1-203ENST00000579289 PRKAR2AP13861 404 aaKnown RBP14.06□□□□□ -0.16
SUPT4H1-203ENST00000579289 RHBDL3P58872 404 aa14.06□□□□□ -0.16
SUPT4H1-203ENST00000579289 PUM3Q15397 648 aaKnown RBP14.06□□□□□ -0.16
SUPT4H1-203ENST00000579289 FAM163AQ96GL9 167 aaPredicted RBP14.06□□□□□ -0.16
SUPT4H1-203ENST00000579289 SRCIN1Q9C0H9 1055 aa14.06□□□□□ -0.16
SUPT4H1-203ENST00000579289 TXNRD2Q9NNW7 524 aa14.06□□□□□ -0.16
SUPT4H1-203ENST00000579289 PICK1Q9NRD5 415 aa14.06□□□□□ -0.16
SUPT4H1-203ENST00000579289 CCND3P30281 292 aaPredicted RBP14.05□□□□□ -0.16
SUPT4H1-203ENST00000579289 GCLCP48506 637 aaPredicted RBP14.05□□□□□ -0.16
SUPT4H1-203ENST00000579289 JAG1P78504 1218 aa14.05□□□□□ -0.16
SUPT4H1-203ENST00000579289 CCL14Q16627 93 aa14.05□□□□□ -0.16
SUPT4H1-203ENST00000579289 Q3C1V9 767 aa14.05□□□□□ -0.16
SUPT4H1-203ENST00000579289 LPIN2Q92539 896 aa14.05□□□□□ -0.16
SUPT4H1-203ENST00000579289 MYH2Q9UKX2 1941 aa14.05□□□□□ -0.16
SUPT4H1-203ENST00000579289 SIPA1L1O43166 1804 aa14.04□□□□□ -0.16
SUPT4H1-203ENST00000579289 FAM196BA6NMK8 535 aa14.04□□□□□ -0.16
SUPT4H1-203ENST00000579289 CYP2B6P20813 491 aa14.04□□□□□ -0.16
SUPT4H1-203ENST00000579289 SPP2Q13103 211 aa14.04□□□□□ -0.16
SUPT4H1-203ENST00000579289 MORN1Q5T089 497 aa14.04□□□□□ -0.16
SUPT4H1-203ENST00000579289 RAPGEFL1Q9UHV5 662 aa14.04□□□□□ -0.16
SUPT4H1-203ENST00000579289 XIRP2A4UGR9 3374 aa14.04□□□□□ -0.16
SUPT4H1-203ENST00000579289 EYA2O00167 538 aa14.03□□□□□ -0.16
SUPT4H1-203ENST00000579289 HMGCS2P54868 508 aa14.03□□□□□ -0.16
SUPT4H1-203ENST00000579289 C9orf50Q5SZB4 431 aa14.03□□□□□ -0.16
SUPT4H1-203ENST00000579289 MAFAQ8NHW3 353 aaPredicted RBP14.03□□□□□ -0.16
SUPT4H1-203ENST00000579289 USP44Q9H0E7 712 aa14.03□□□□□ -0.16
SUPT4H1-203ENST00000579289 RBPJLQ9UBG7 517 aa14.03□□□□□ -0.16
SUPT4H1-203ENST00000579289 ATAD5Q96QE3 1844 aa14.03□□□□□ -0.16
SUPT4H1-203ENST00000579289 CHD9Q3L8U1 2897 aa14.02□□□□□ -0.16
SUPT4H1-203ENST00000579289 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
SUPT4H1-203ENST00000579289 LDHBP07195 334 aaKnown RBP14.02□□□□□ -0.17
SUPT4H1-203ENST00000579289 IFIT1P09914 478 aaKnown RBP14.02□□□□□ -0.17
SUPT4H1-203ENST00000579289 HOXA7P31268 230 aaPredicted RBP14.02□□□□□ -0.17
SUPT4H1-203ENST00000579289 PHKA1P46020 1223 aa14.02□□□□□ -0.17
SUPT4H1-203ENST00000579289 SHHQ15465 462 aa14.02□□□□□ -0.17
SUPT4H1-203ENST00000579289 ZNF280CQ8ND82 737 aa14.02□□□□□ -0.17
SUPT4H1-203ENST00000579289 P2RX7Q99572 595 aaKnown RBP14.02□□□□□ -0.17
SUPT4H1-203ENST00000579289 PORCNQ9H237 461 aa14.02□□□□□ -0.17
SUPT4H1-203ENST00000579289 PNMA3Q9UL41 463 aa14.02□□□□□ -0.17
SUPT4H1-203ENST00000579289 LRRFIP2Q9Y608 721 aaKnown RBP14.02□□□□□ -0.17
SUPT4H1-203ENST00000579289 REV3LO60673 3130 aa14.02□□□□□ -0.17
SUPT4H1-203ENST00000579289 RLFQ13129 1914 aa14.02□□□□□ -0.17
SUPT4H1-203ENST00000579289 COL9A1P20849 921 aa14.01□□□□□ -0.17
SUPT4H1-203ENST00000579289 SLC4A10Q6U841 1118 aa14.01□□□□□ -0.17
SUPT4H1-203ENST00000579289 WDR63Q8IWG1 891 aa14.01□□□□□ -0.17
SUPT4H1-203ENST00000579289 MYLIPQ8WY64 445 aa14.01□□□□□ -0.17
SUPT4H1-203ENST00000579289 OSBPL5Q9H0X9 879 aaPredicted RBP14.01□□□□□ -0.17
SUPT4H1-203ENST00000579289 FLRT1Q9NZU1 646 aa14.01□□□□□ -0.17
SUPT4H1-203ENST00000579289 GPR75-ASB3A0A0A6YYF3 556 aa14□□□□□ -0.17
SUPT4H1-203ENST00000579289 CAP2P40123 477 aa14□□□□□ -0.17
SUPT4H1-203ENST00000579289 SHROOM1Q2M3G4 852 aaPredicted RBP14□□□□□ -0.17
SUPT4H1-203ENST00000579289 ZNF697Q5TEC3 545 aa14□□□□□ -0.17
SUPT4H1-203ENST00000579289 USP38Q8NB14 1042 aa14□□□□□ -0.17
SUPT4H1-203ENST00000579289 CNMDO75829 334 aa13.99□□□□□ -0.17
SUPT4H1-203ENST00000579289 SLC5A1P13866 664 aa13.99□□□□□ -0.17
SUPT4H1-203ENST00000579289 WDR18Q9BV38 432 aa13.99□□□□□ -0.17
SUPT4H1-203ENST00000579289 SEMA3EO15041 775 aa13.98□□□□□ -0.17
SUPT4H1-203ENST00000579289 ANP32CO43423 234 aa13.98□□□□□ -0.17
SUPT4H1-203ENST00000579289 ADORA1P30542 326 aa13.98□□□□□ -0.17
SUPT4H1-203ENST00000579289 BTDP43251 543 aa13.98□□□□□ -0.17
SUPT4H1-203ENST00000579289 HERVK_113P62684 666 aa13.98□□□□□ -0.17
SUPT4H1-203ENST00000579289 GPR142Q7Z601 462 aa13.98□□□□□ -0.17
SUPT4H1-203ENST00000579289 TRPV1Q8NER1 839 aa13.98□□□□□ -0.17
SUPT4H1-203ENST00000579289 NUDT12Q9BQG2 462 aa13.98□□□□□ -0.17
SUPT4H1-203ENST00000579289 DNAJC18Q9H819 358 aa13.98□□□□□ -0.17
SUPT4H1-203ENST00000579289 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.98□□□□□ -0.17
SUPT4H1-203ENST00000579289 MROH7-TTC4A0A0A0MT08 1334 aa13.97□□□□□ -0.17
SUPT4H1-203ENST00000579289 PDS5AQ29RF7 1337 aaKnown RBP13.97□□□□□ -0.17
SUPT4H1-203ENST00000579289 SMAD3P84022 425 aaKnown RBP13.97□□□□□ -0.17
SUPT4H1-203ENST00000579289 PICALMQ13492 652 aa13.97□□□□□ -0.17
SUPT4H1-203ENST00000579289 RASGRF1Q13972 1273 aa13.97□□□□□ -0.17
SUPT4H1-203ENST00000579289 SNX17Q15036 470 aa13.97□□□□□ -0.17
SUPT4H1-203ENST00000579289 METTL16Q86W50 562 aaKnown RBP13.97□□□□□ -0.17
SUPT4H1-203ENST00000579289 ZSCAN29Q8IWY8 852 aaPredicted RBP13.97□□□□□ -0.17
SUPT4H1-203ENST00000579289 SOCS4Q8WXH5 440 aa13.97□□□□□ -0.17
SUPT4H1-203ENST00000579289 TBC1D2Q9BYX2 928 aa13.97□□□□□ -0.17
SUPT4H1-203ENST00000579289 SENP6Q9GZR1 1112 aaPredicted RBP13.97□□□□□ -0.17
SUPT4H1-203ENST00000579289 DENND2AQ9ULE3 1009 aa13.97□□□□□ -0.17
SUPT4H1-203ENST00000579289 USP17L5A8MUK1 530 aa13.96□□□□□ -0.17
SUPT4H1-203ENST00000579289 ZKSCAN1P17029 563 aaPredicted RBP13.96□□□□□ -0.17
SUPT4H1-203ENST00000579289 ITGB8P26012 769 aa13.96□□□□□ -0.17
SUPT4H1-203ENST00000579289 EPHB4P54760 987 aa13.96□□□□□ -0.17
SUPT4H1-203ENST00000579289 BACE1P56817 501 aa13.96□□□□□ -0.17
SUPT4H1-203ENST00000579289 RTP1P59025 263 aa13.96□□□□□ -0.17
SUPT4H1-203ENST00000579289 ATP2B3Q16720 1220 aa13.96□□□□□ -0.17
SUPT4H1-203ENST00000579289 CCDC102BQ68D86 513 aa13.96□□□□□ -0.17
SUPT4H1-203ENST00000579289 TRMT44Q8IYL2 757 aaKnown RBP13.96□□□□□ -0.17
SUPT4H1-203ENST00000579289 MRPL50Q8N5N7 158 aaKnown RBP13.96□□□□□ -0.17
SUPT4H1-203ENST00000579289 GPRC5AQ8NFJ5 357 aa13.96□□□□□ -0.17
SUPT4H1-203ENST00000579289 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms