RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 MS4A4AQ96JQ5 239 aa17.48■□□□□ 0.39
MKS1-207ENST00000578789 PI4KBQ9UBF8 816 aa17.48■□□□□ 0.39
MKS1-207ENST00000578789 STAP2Q9UGK3 403 aa17.48■□□□□ 0.39
MKS1-207ENST00000578789 HERC5Q9UII4 1024 aaKnown RBP17.48■□□□□ 0.39
MKS1-207ENST00000578789 TSKSQ9UJT2 592 aa17.48■□□□□ 0.39
MKS1-207ENST00000578789 CTNND1O60716 968 aaKnown RBP17.47■□□□□ 0.39
MKS1-207ENST00000578789 PPATQ06203 517 aa17.47■□□□□ 0.39
MKS1-207ENST00000578789 LCORLQ8N3X6 602 aa17.47■□□□□ 0.39
MKS1-207ENST00000578789 CFHR5Q9BXR6 569 aa17.47■□□□□ 0.39
MKS1-207ENST00000578789 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.47■□□□□ 0.39
MKS1-207ENST00000578789 TRPA1O75762 1119 aa17.46■□□□□ 0.39
MKS1-207ENST00000578789 CHGBP05060 677 aa17.46■□□□□ 0.39
MKS1-207ENST00000578789 GTF2A2P52657 109 aa17.46■□□□□ 0.39
MKS1-207ENST00000578789 PDE1AP54750 535 aa17.46■□□□□ 0.39
MKS1-207ENST00000578789 NUCB1Q02818 461 aa17.46■□□□□ 0.39
MKS1-207ENST00000578789 SLFNL1Q499Z3 407 aa17.46■□□□□ 0.39
MKS1-207ENST00000578789 IFNL1Q8IU54 200 aa17.46■□□□□ 0.39
MKS1-207ENST00000578789 CRNKL1Q9BZJ0 848 aaKnown RBP17.46■□□□□ 0.39
MKS1-207ENST00000578789 LNPKQ9C0E8 428 aa17.46■□□□□ 0.39
MKS1-207ENST00000578789 DNAJC18Q9H819 358 aa17.46■□□□□ 0.39
MKS1-207ENST00000578789 PALD1Q9ULE6 856 aa17.46■□□□□ 0.39
MKS1-207ENST00000578789 PTPRFP10586 1907 aa17.46■□□□□ 0.39
MKS1-207ENST00000578789 FAM196BA6NMK8 535 aa17.45■□□□□ 0.38
MKS1-207ENST00000578789 IGF2BP3O00425 579 aaKnown RBP eCLIP17.45■□□□□ 0.38
MKS1-207ENST00000578789 IRF6O14896 467 aa17.45■□□□□ 0.38
MKS1-207ENST00000578789 MBD4O95243 580 aa17.45■□□□□ 0.38
MKS1-207ENST00000578789 ALDH1A1P00352 501 aa17.45■□□□□ 0.38
MKS1-207ENST00000578789 HLA-DOAP06340 250 aa17.45■□□□□ 0.38
MKS1-207ENST00000578789 ZFYP08048 801 aaPredicted RBP17.45■□□□□ 0.38
MKS1-207ENST00000578789 COL13A1Q5TAT6 717 aaPredicted RBP17.45■□□□□ 0.38
MKS1-207ENST00000578789 CHD1LQ86WJ1 897 aa17.45■□□□□ 0.38
MKS1-207ENST00000578789 FOXP4Q8IVH2 680 aaPredicted RBP17.45■□□□□ 0.38
MKS1-207ENST00000578789 EHD4Q9H223 541 aa17.45■□□□□ 0.38
MKS1-207ENST00000578789 SAP30BPQ9UHR5 308 aaKnown RBP17.45■□□□□ 0.38
MKS1-207ENST00000578789 KCNH4Q9UQ05 1017 aa17.45■□□□□ 0.38
MKS1-207ENST00000578789 PTPRAP18433 802 aa17.44■□□□□ 0.38
MKS1-207ENST00000578789 BRI3BPQ8WY22 251 aa17.44■□□□□ 0.38
MKS1-207ENST00000578789 PTPN18Q99952 460 aa17.44■□□□□ 0.38
MKS1-207ENST00000578789 ARMT1Q9H993 441 aa17.44■□□□□ 0.38
MKS1-207ENST00000578789 BAZ2AQ9UIF9 1905 aaKnown RBP17.43■□□□□ 0.38
MKS1-207ENST00000578789 CASP8AP2Q9UKL3 1982 aa17.43■□□□□ 0.38
MKS1-207ENST00000578789 CCL15-CCL14A0A0B4J2E2 113 aa17.43■□□□□ 0.38
MKS1-207ENST00000578789 RNF113AO15541 343 aaKnown RBP17.43■□□□□ 0.38
MKS1-207ENST00000578789 SNAPC2Q13487 334 aa17.43■□□□□ 0.38
MKS1-207ENST00000578789 CCL15Q16663 113 aa17.43■□□□□ 0.38
MKS1-207ENST00000578789 NOM1Q5C9Z4 860 aaKnown RBP17.43■□□□□ 0.38
MKS1-207ENST00000578789 B4GALNT3Q6L9W6 998 aa17.43■□□□□ 0.38
MKS1-207ENST00000578789 APPBP2Q92624 585 aa17.43■□□□□ 0.38
MKS1-207ENST00000578789 PUS7LQ9H0K6 701 aaKnown RBP17.43■□□□□ 0.38
MKS1-207ENST00000578789 DCP1AQ9NPI6 582 aaPredicted RBP17.43■□□□□ 0.38
MKS1-207ENST00000578789 PICK1Q9NRD5 415 aa17.43■□□□□ 0.38
MKS1-207ENST00000578789 CETPP11597 493 aa17.42■□□□□ 0.38
MKS1-207ENST00000578789 CAP2P40123 477 aa17.42■□□□□ 0.38
MKS1-207ENST00000578789 RRP1BQ14684 758 aaKnown RBP17.42■□□□□ 0.38
MKS1-207ENST00000578789 LRRFIP1Q32MZ4 808 aaKnown RBP17.42■□□□□ 0.38
MKS1-207ENST00000578789 OTUD7BQ6GQQ9 843 aa17.42■□□□□ 0.38
MKS1-207ENST00000578789 TTC6Q86TZ1 520 aa17.42■□□□□ 0.38
MKS1-207ENST00000578789 CRACR2BQ8N4Y2 399 aaPredicted RBP17.42■□□□□ 0.38
MKS1-207ENST00000578789 SDR42E1Q8WUS8 393 aa17.42■□□□□ 0.38
MKS1-207ENST00000578789 OSBPL3Q9H4L5 887 aa17.42■□□□□ 0.38
MKS1-207ENST00000578789 ZCCHC17Q9NP64 241 aaKnown RBP17.42■□□□□ 0.38
MKS1-207ENST00000578789 ATP8A2Q9NTI2 1148 aa17.42■□□□□ 0.38
MKS1-207ENST00000578789 LOC285556D6RIA3 1793 aa17.41■□□□□ 0.38
MKS1-207ENST00000578789 PRKAB2O43741 272 aa17.41■□□□□ 0.38
MKS1-207ENST00000578789 OSBP2Q969R2 916 aa17.41■□□□□ 0.38
MKS1-207ENST00000578789 FSD1Q9BTV5 496 aa17.41■□□□□ 0.38
MKS1-207ENST00000578789 TRIM34Q9BYJ4 488 aa17.41■□□□□ 0.38
MKS1-207ENST00000578789 SERPINB13Q9UIV8 391 aa17.41■□□□□ 0.38
MKS1-207ENST00000578789 AFG3L2Q9Y4W6 797 aa17.41■□□□□ 0.38
MKS1-207ENST00000578789 CXCL11O14625 94 aa17.4■□□□□ 0.38
MKS1-207ENST00000578789 TBC1D8O95759 1140 aa17.4■□□□□ 0.38
MKS1-207ENST00000578789 SLC4A8Q2Y0W8 1093 aa17.4■□□□□ 0.38
MKS1-207ENST00000578789 TATDN1Q6P1N9 297 aa17.4■□□□□ 0.38
MKS1-207ENST00000578789 PLEKHM2Q8IWE5 1019 aa17.4■□□□□ 0.38
MKS1-207ENST00000578789 EVI5LQ96CN4 794 aa17.4■□□□□ 0.38
MKS1-207ENST00000578789 STRBPQ96SI9 672 aaKnown RBP17.4■□□□□ 0.38
MKS1-207ENST00000578789 TBC1D2Q9BYX2 928 aa17.4■□□□□ 0.38
MKS1-207ENST00000578789 GINM1Q9NU53 330 aa17.4■□□□□ 0.38
MKS1-207ENST00000578789 MCM9Q9NXL9 1143 aa17.4■□□□□ 0.38
MKS1-207ENST00000578789 TAOK2Q9UL54 1235 aa17.4■□□□□ 0.38
MKS1-207ENST00000578789 MYH8P13535 1937 aa17.39■□□□□ 0.37
MKS1-207ENST00000578789 A0A0G2JLL6 359 aaPredicted RBP17.39■□□□□ 0.37
MKS1-207ENST00000578789 POLR3DP05423 398 aaPredicted RBP17.39■□□□□ 0.37
MKS1-207ENST00000578789 PLCD1P51178 756 aa17.39■□□□□ 0.37
MKS1-207ENST00000578789 GABPAQ06546 454 aa17.39■□□□□ 0.37
MKS1-207ENST00000578789 MOGSQ13724 837 aa17.39■□□□□ 0.37
MKS1-207ENST00000578789 PRRT2Q7Z6L0 340 aaPredicted RBP17.39■□□□□ 0.37
MKS1-207ENST00000578789 FAM43AQ8N2R8 423 aa17.39■□□□□ 0.37
MKS1-207ENST00000578789 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.39■□□□□ 0.37
MKS1-207ENST00000578789 SLC4A4Q9Y6R1 1079 aa17.39■□□□□ 0.37
MKS1-207ENST00000578789 ZHX2Q9Y6X8 837 aa17.39■□□□□ 0.37
MKS1-207ENST00000578789 BTBD19C9JJ37 291 aa17.38■□□□□ 0.37
MKS1-207ENST00000578789 GPR25O00155 361 aa17.38■□□□□ 0.37
MKS1-207ENST00000578789 ASNSP08243 561 aa17.38■□□□□ 0.37
MKS1-207ENST00000578789 ZMYM1Q5SVZ6 1142 aa17.38■□□□□ 0.37
MKS1-207ENST00000578789 TICAM2Q86XR7 235 aa17.38■□□□□ 0.37
MKS1-207ENST00000578789 R3HDMLQ9H3Y0 253 aa17.38■□□□□ 0.37
MKS1-207ENST00000578789 M0R2C6 588 aa17.37■□□□□ 0.37
MKS1-207ENST00000578789 GPAA1O43292 621 aa17.37■□□□□ 0.37
MKS1-207ENST00000578789 SHMT1P34896 483 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms