RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 ZNF316A6NFI3 1004 aaPredicted RBP14.4□□□□□ -0.1
CTDNEP1-212ENST00000576613 HMGCRP04035 888 aa14.4□□□□□ -0.1
CTDNEP1-212ENST00000576613 LDHCP07864 332 aa14.4□□□□□ -0.1
CTDNEP1-212ENST00000576613 SLURP2P0DP57 97 aa14.4□□□□□ -0.1
CTDNEP1-212ENST00000576613 SPP2Q13103 211 aa14.4□□□□□ -0.1
CTDNEP1-212ENST00000576613 CCDC84Q86UT8 332 aaPredicted RBP14.4□□□□□ -0.1
CTDNEP1-212ENST00000576613 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.4□□□□□ -0.1
CTDNEP1-212ENST00000576613 LAMA3Q16787 3333 aa14.4□□□□□ -0.1
CTDNEP1-212ENST00000576613 ALPK3Q96L96 1907 aa14.39□□□□□ -0.11
CTDNEP1-212ENST00000576613 FAM196BA6NMK8 535 aa14.39□□□□□ -0.11
CTDNEP1-212ENST00000576613 CT47B1P0C2W7 299 aaPredicted RBP14.39□□□□□ -0.11
CTDNEP1-212ENST00000576613 RHBDL3P58872 404 aa14.39□□□□□ -0.11
CTDNEP1-212ENST00000576613 SLC17A8Q8NDX2 589 aa14.39□□□□□ -0.11
CTDNEP1-212ENST00000576613 XAGE2Q96GT9 111 aa14.39□□□□□ -0.11
CTDNEP1-212ENST00000576613 STAP2Q9UGK3 403 aa14.39□□□□□ -0.11
CTDNEP1-212ENST00000576613 NOB1Q9ULX3 412 aaKnown RBP14.39□□□□□ -0.11
CTDNEP1-212ENST00000576613 DOCK3Q8IZD9 2030 aa14.39□□□□□ -0.11
CTDNEP1-212ENST00000576613 HMGCS2P54868 508 aa14.38□□□□□ -0.11
CTDNEP1-212ENST00000576613 TFCP2Q12800 502 aa14.38□□□□□ -0.11
CTDNEP1-212ENST00000576613 GORABQ5T7V8 394 aa14.38□□□□□ -0.11
CTDNEP1-212ENST00000576613 MEIS3Q99687 375 aa14.38□□□□□ -0.11
CTDNEP1-212ENST00000576613 AS3MTQ9HBK9 375 aa14.38□□□□□ -0.11
CTDNEP1-212ENST00000576613 HMX1Q9NP08 348 aaPredicted RBP14.38□□□□□ -0.11
CTDNEP1-212ENST00000576613 HERC5Q9UII4 1024 aaKnown RBP14.38□□□□□ -0.11
CTDNEP1-212ENST00000576613 RPTORQ8N122 1335 aa14.38□□□□□ -0.11
CTDNEP1-212ENST00000576613 COL6A3P12111 3177 aa14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 USP17L5A8MUK1 530 aa14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 SRGAP3O43295 1099 aa14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 GNAI3P08754 354 aa14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 CAP2P40123 477 aa14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 C7orf61Q8IZ16 206 aa14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 SPATA5Q8NB90 893 aa14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 DIS3LQ8TF46 1054 aaKnown RBP14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 NSUN4Q96CB9 384 aaKnown RBP14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 NEUROD6Q96NK8 337 aa14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 NOL10Q9BSC4 688 aaKnown RBP14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 NBPF3Q9H094 633 aa14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 ASCC2Q9H1I8 757 aaPredicted RBP14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 RAI14Q9P0K7 980 aa14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 HMG20BQ9P0W2 317 aa14.37□□□□□ -0.11
CTDNEP1-212ENST00000576613 DDX60LQ5H9U9 1706 aaKnown RBP14.36□□□□□ -0.11
CTDNEP1-212ENST00000576613 SOX1O00570 391 aaPredicted RBP14.36□□□□□ -0.11
CTDNEP1-212ENST00000576613 BMP8BP34820 402 aa14.36□□□□□ -0.11
CTDNEP1-212ENST00000576613 IRX3P78415 501 aaPredicted RBP14.36□□□□□ -0.11
CTDNEP1-212ENST00000576613 SH3D19Q5HYK7 790 aa14.36□□□□□ -0.11
CTDNEP1-212ENST00000576613 ZNF384Q8TF68 577 aa14.36□□□□□ -0.11
CTDNEP1-212ENST00000576613 LRCH3Q96II8 777 aa14.36□□□□□ -0.11
CTDNEP1-212ENST00000576613 MAST2Q6P0Q8 1798 aa14.35□□□□□ -0.11
CTDNEP1-212ENST00000576613 DLL1O00548 723 aa14.35□□□□□ -0.11
CTDNEP1-212ENST00000576613 MTX1Q13505 466 aa14.35□□□□□ -0.11
CTDNEP1-212ENST00000576613 GPR153Q6NV75 609 aa14.35□□□□□ -0.11
CTDNEP1-212ENST00000576613 TEX11Q8IYF3 940 aa14.35□□□□□ -0.11
CTDNEP1-212ENST00000576613 CDCA7LQ96GN5 454 aa14.35□□□□□ -0.11
CTDNEP1-212ENST00000576613 GDF15Q99988 308 aa14.35□□□□□ -0.11
CTDNEP1-212ENST00000576613 DHX36Q9H2U1 1008 aaKnown RBP14.35□□□□□ -0.11
CTDNEP1-212ENST00000576613 C11orf49Q9H6J7 331 aa14.35□□□□□ -0.11
CTDNEP1-212ENST00000576613 TMOD4Q9NZQ9 345 aa14.35□□□□□ -0.11
CTDNEP1-212ENST00000576613 LRP2BPQ9P2M1 347 aa14.35□□□□□ -0.11
CTDNEP1-212ENST00000576613 PI4KBQ9UBF8 816 aa14.35□□□□□ -0.11
CTDNEP1-212ENST00000576613 MORF4L1Q9UBU8 362 aa14.35□□□□□ -0.11
CTDNEP1-212ENST00000576613 GJD2Q9UKL4 321 aa14.35□□□□□ -0.11
CTDNEP1-212ENST00000576613 PLXNB2O15031 1838 aa14.34□□□□□ -0.11
CTDNEP1-212ENST00000576613 ASNSP08243 561 aa14.34□□□□□ -0.11
CTDNEP1-212ENST00000576613 ARID4AP29374 1257 aaPredicted RBP14.34□□□□□ -0.11
CTDNEP1-212ENST00000576613 MTMR2Q13614 643 aa14.34□□□□□ -0.11
CTDNEP1-212ENST00000576613 PI16Q6UXB8 463 aa14.34□□□□□ -0.11
CTDNEP1-212ENST00000576613 TBC1D9Q6ZT07 1266 aa14.34□□□□□ -0.11
CTDNEP1-212ENST00000576613 TRMT2AQ8IZ69 625 aaKnown RBP14.34□□□□□ -0.11
CTDNEP1-212ENST00000576613 SOCS4Q8WXH5 440 aa14.34□□□□□ -0.11
CTDNEP1-212ENST00000576613 WDR18Q9BV38 432 aa14.34□□□□□ -0.11
CTDNEP1-212ENST00000576613 BAG3O95817 575 aa14.33□□□□□ -0.12
CTDNEP1-212ENST00000576613 UQCRFS1P1P0C7P4 283 aa14.33□□□□□ -0.12
CTDNEP1-212ENST00000576613 PLCG2P16885 1265 aa14.33□□□□□ -0.12
CTDNEP1-212ENST00000576613 BACE1P56817 501 aa14.33□□□□□ -0.12
CTDNEP1-212ENST00000576613 PDE3AQ14432 1141 aa14.33□□□□□ -0.12
CTDNEP1-212ENST00000576613 TRMT44Q8IYL2 757 aaKnown RBP14.33□□□□□ -0.12
CTDNEP1-212ENST00000576613 TRIB2Q92519 343 aa14.33□□□□□ -0.12
CTDNEP1-212ENST00000576613 NUDT12Q9BQG2 462 aa14.33□□□□□ -0.12
CTDNEP1-212ENST00000576613 TRIM34Q9BYJ4 488 aa14.33□□□□□ -0.12
CTDNEP1-212ENST00000576613 OGDHLQ9ULD0 1010 aa14.33□□□□□ -0.12
CTDNEP1-212ENST00000576613 ZMYND8Q9ULU4 1186 aaPredicted RBP14.33□□□□□ -0.12
CTDNEP1-212ENST00000576613 SIPA1L1O43166 1804 aa14.32□□□□□ -0.12
CTDNEP1-212ENST00000576613 XRCC5P13010 732 aaKnown RBP14.32□□□□□ -0.12
CTDNEP1-212ENST00000576613 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
CTDNEP1-212ENST00000576613 CYP2B6P20813 491 aa14.32□□□□□ -0.12
CTDNEP1-212ENST00000576613 HOXA7P31268 230 aaPredicted RBP14.32□□□□□ -0.12
CTDNEP1-212ENST00000576613 TRIM32Q13049 653 aa14.32□□□□□ -0.12
CTDNEP1-212ENST00000576613 RRP1BQ14684 758 aaKnown RBP14.32□□□□□ -0.12
CTDNEP1-212ENST00000576613 CCAR1Q8IX12 1150 aaKnown RBP14.32□□□□□ -0.12
CTDNEP1-212ENST00000576613 CRACR2BQ8N4Y2 399 aaPredicted RBP14.32□□□□□ -0.12
CTDNEP1-212ENST00000576613 GPRC5AQ8NFJ5 357 aa14.32□□□□□ -0.12
CTDNEP1-212ENST00000576613 SH3RF3Q8TEJ3 882 aaPredicted RBP14.32□□□□□ -0.12
CTDNEP1-212ENST00000576613 ARHGAP45Q92619 1136 aa14.32□□□□□ -0.12
CTDNEP1-212ENST00000576613 GINM1Q9NU53 330 aa14.32□□□□□ -0.12
CTDNEP1-212ENST00000576613 FOCADQ5VW36 1801 aa14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 A0A0C4DFX4 3053 aa14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 C19orf81C9J6K1 198 aa14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 ZKSCAN1P17029 563 aaPredicted RBP14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 SYN1P17600 705 aa14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 MAPK4P31152 587 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms