RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 ASAP3Q8TDY4 903 aa6.8□□□□□ -1.32
PRPF8-211ENST00000574728 FAM161BQ96MY7 647 aa6.8□□□□□ -1.32
PRPF8-211ENST00000574728 HIRIP3Q9BW71 556 aaPredicted RBP6.8□□□□□ -1.32
PRPF8-211ENST00000574728 LACRTQ9GZZ8 138 aa6.8□□□□□ -1.32
PRPF8-211ENST00000574728 FAM8A1Q9UBU6 413 aa6.8□□□□□ -1.32
PRPF8-211ENST00000574728 TRIM33Q9UPN9 1127 aa6.8□□□□□ -1.32
PRPF8-211ENST00000574728 SHPRHQ149N8 1683 aa6.8□□□□□ -1.32
PRPF8-211ENST00000574728 ATP7BP35670 1465 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 A0A096LPE4 126 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 TMEM238LA0A1B0GVL6 79 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 A0A1W2PPZ6 126 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 XRCC5P13010 732 aaKnown RBP6.79□□□□□ -1.32
PRPF8-211ENST00000574728 CDC27P30260 824 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 GSTT1P30711 240 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 DGKGP49619 791 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 GRIK5Q16478 980 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 GLIS3Q8NEA6 775 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 BSNDQ8WZ55 320 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 PCGF6Q9BYE7 350 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 ZFYVE1Q9HBF4 777 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 ABCB6Q9NP58 842 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 VTI1BQ9UEU0 232 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 TULP4Q9NRJ4 1543 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 RALGAPBQ86X10 1494 aa6.79□□□□□ -1.32
PRPF8-211ENST00000574728 SPATA31A6Q5VVP1 1343 aa6.78□□□□□ -1.32
PRPF8-211ENST00000574728 METTL12A8MUP2 240 aa6.78□□□□□ -1.32
PRPF8-211ENST00000574728 PIK3R2O00459 728 aa6.78□□□□□ -1.32
PRPF8-211ENST00000574728 LORP23490 312 aaPredicted RBP6.78□□□□□ -1.32
PRPF8-211ENST00000574728 GRIA4P48058 902 aa6.78□□□□□ -1.32
PRPF8-211ENST00000574728 FCGRTP55899 365 aa6.78□□□□□ -1.32
PRPF8-211ENST00000574728 CABP4P57796 275 aa6.78□□□□□ -1.32
PRPF8-211ENST00000574728 DTHD1Q6ZMT9 781 aa6.78□□□□□ -1.32
PRPF8-211ENST00000574728 C8orf86Q6ZUL3 223 aa6.78□□□□□ -1.32
PRPF8-211ENST00000574728 WFDC8Q8IUA0 241 aa6.78□□□□□ -1.32
PRPF8-211ENST00000574728 LRRC59Q96AG4 307 aaKnown RBP6.78□□□□□ -1.32
PRPF8-211ENST00000574728 ZNF428Q96B54 188 aa6.78□□□□□ -1.32
PRPF8-211ENST00000574728 MRRFQ96E11 262 aaKnown RBP6.78□□□□□ -1.32
PRPF8-211ENST00000574728 ADAM19Q9H013 955 aa6.78□□□□□ -1.32
PRPF8-211ENST00000574728 MUC3BQ9H195 1237 aa6.78□□□□□ -1.32
PRPF8-211ENST00000574728 POGKQ9P215 609 aa6.78□□□□□ -1.32
PRPF8-211ENST00000574728 COL22A1Q8NFW1 1626 aaPredicted RBP6.77□□□□□ -1.33
PRPF8-211ENST00000574728 USP17L7P0C7H9 530 aa6.77□□□□□ -1.33
PRPF8-211ENST00000574728 ITPKAP23677 461 aa6.77□□□□□ -1.33
PRPF8-211ENST00000574728 PTPN12Q05209 780 aaKnown RBP6.77□□□□□ -1.33
PRPF8-211ENST00000574728 MRPL58Q14197 206 aaKnown RBP6.77□□□□□ -1.33
PRPF8-211ENST00000574728 SPRED3Q2MJR0 410 aa6.77□□□□□ -1.33
PRPF8-211ENST00000574728 MSL1Q68DK7 614 aa6.77□□□□□ -1.33
PRPF8-211ENST00000574728 PODNQ7Z5L7 613 aa6.77□□□□□ -1.33
PRPF8-211ENST00000574728 IL22RA1Q8N6P7 574 aa6.77□□□□□ -1.33
PRPF8-211ENST00000574728 SOX13Q9UN79 622 aa6.77□□□□□ -1.33
PRPF8-211ENST00000574728 SPATA31A3Q5VYP0 1347 aa6.76□□□□□ -1.33
PRPF8-211ENST00000574728 NPHP3Q7Z494 1330 aa6.76□□□□□ -1.33
PRPF8-211ENST00000574728 CENPJQ9HC77 1338 aaPredicted RBP6.76□□□□□ -1.33
PRPF8-211ENST00000574728 UNCXA6NJT0 531 aa6.76□□□□□ -1.33
PRPF8-211ENST00000574728 NID1P14543 1247 aa6.76□□□□□ -1.33
PRPF8-211ENST00000574728 HOXB4P17483 251 aaPredicted RBP6.76□□□□□ -1.33
PRPF8-211ENST00000574728 VAMP1P23763 118 aa6.76□□□□□ -1.33
PRPF8-211ENST00000574728 FAM117BQ6P1L5 589 aa6.76□□□□□ -1.33
PRPF8-211ENST00000574728 CRELD1Q96HD1 420 aa6.76□□□□□ -1.33
PRPF8-211ENST00000574728 CDK19Q9BWU1 502 aa6.76□□□□□ -1.33
PRPF8-211ENST00000574728 SH2B1Q9NRF2 756 aaPredicted RBP6.76□□□□□ -1.33
PRPF8-211ENST00000574728 MKL2Q9ULH7 1088 aa6.76□□□□□ -1.33
PRPF8-211ENST00000574728 PPME1Q9Y570 386 aa6.76□□□□□ -1.33
PRPF8-211ENST00000574728 POLR3AO14802 1390 aaPredicted RBP6.76□□□□□ -1.33
PRPF8-211ENST00000574728 CLSPNQ9HAW4 1339 aa6.76□□□□□ -1.33
PRPF8-211ENST00000574728 RGPD8O14715 1765 aaPredicted RBP6.75□□□□□ -1.33
PRPF8-211ENST00000574728 KIF1AQ12756 1690 aa6.75□□□□□ -1.33
PRPF8-211ENST00000574728 TOPAZ1Q8N9V7 1692 aa6.75□□□□□ -1.33
PRPF8-211ENST00000574728 SBNO1A3KN83 1393 aa6.75□□□□□ -1.33
PRPF8-211ENST00000574728 ROCK2O75116 1388 aaKnown RBP6.75□□□□□ -1.33
PRPF8-211ENST00000574728 SBNO2Q9Y2G9 1366 aa6.75□□□□□ -1.33
PRPF8-211ENST00000574728 RPS26P11Q5JNZ5 115 aaPredicted RBP6.75□□□□□ -1.33
PRPF8-211ENST00000574728 ADAMTSL4Q6UY14 1074 aa6.75□□□□□ -1.33
PRPF8-211ENST00000574728 KRT28Q7Z3Y7 464 aa6.75□□□□□ -1.33
PRPF8-211ENST00000574728 C3orf58Q8NDZ4 430 aa6.75□□□□□ -1.33
PRPF8-211ENST00000574728 PMFBP1Q8TBY8 1022 aa6.75□□□□□ -1.33
PRPF8-211ENST00000574728 TESK2Q96S53 571 aa6.75□□□□□ -1.33
PRPF8-211ENST00000574728 CLEC4MQ9H2X3 399 aaPredicted RBP6.75□□□□□ -1.33
PRPF8-211ENST00000574728 ZNF576Q9H609 170 aa6.75□□□□□ -1.33
PRPF8-211ENST00000574728 PPM1HQ9ULR3 514 aa6.75□□□□□ -1.33
PRPF8-211ENST00000574728 AKAP2Q9Y2D5 859 aa6.75□□□□□ -1.33
PRPF8-211ENST00000574728 TRPM3Q9HCF6 1732 aaPredicted RBP6.75□□□□□ -1.33
PRPF8-211ENST00000574728 EP400Q96L91 3159 aa6.75□□□□□ -1.33
PRPF8-211ENST00000574728 SSH2Q76I76 1423 aa6.75□□□□□ -1.33
PRPF8-211ENST00000574728 TONSLQ96HA7 1378 aa6.74□□□□□ -1.33
PRPF8-211ENST00000574728 FAM181BA6NEQ2 426 aa6.74□□□□□ -1.33
PRPF8-211ENST00000574728 SPDYE3A6NKU9 549 aa6.74□□□□□ -1.33
PRPF8-211ENST00000574728 E9PSI1 815 aa6.74□□□□□ -1.33
PRPF8-211ENST00000574728 H3BRJ5 948 aa6.74□□□□□ -1.33
PRPF8-211ENST00000574728 GNB5O14775 395 aa6.74□□□□□ -1.33
PRPF8-211ENST00000574728 EPHA1P21709 976 aa6.74□□□□□ -1.33
PRPF8-211ENST00000574728 BAG6P46379 1132 aa6.74□□□□□ -1.33
PRPF8-211ENST00000574728 SNRPNP63162 240 aaKnown RBP6.74□□□□□ -1.33
PRPF8-211ENST00000574728 COL9A3Q14050 684 aaPredicted RBP6.74□□□□□ -1.33
PRPF8-211ENST00000574728 TRAPPC3LQ5T215 181 aa6.74□□□□□ -1.33
PRPF8-211ENST00000574728 VN1R5Q7Z5H4 357 aa6.74□□□□□ -1.33
PRPF8-211ENST00000574728 DMRTC2Q8IXT2 367 aaPredicted RBP6.74□□□□□ -1.33
PRPF8-211ENST00000574728 KIAA1522Q9P206 1035 aaPredicted RBP6.74□□□□□ -1.33
PRPF8-211ENST00000574728 ADAMTS8Q9UP79 889 aa6.74□□□□□ -1.33
PRPF8-211ENST00000574728 TNS3Q68CZ2 1445 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms