RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 ZAP70P43403 619 aa14.34□□□□□ -0.11
PRPF8-206ENST00000572723 FCGRTP55899 365 aa14.34□□□□□ -0.11
PRPF8-206ENST00000572723 CEP85Q6P2H3 762 aa14.34□□□□□ -0.11
PRPF8-206ENST00000572723 ERC1Q8IUD2 1116 aa14.34□□□□□ -0.11
PRPF8-206ENST00000572723 FOXP4Q8IVH2 680 aaPredicted RBP14.34□□□□□ -0.11
PRPF8-206ENST00000572723 SH3TC2Q8TF17 1288 aa14.34□□□□□ -0.11
PRPF8-206ENST00000572723 EAF2Q96CJ1 260 aaPredicted RBP14.34□□□□□ -0.11
PRPF8-206ENST00000572723 CCDC8Q9H0W5 538 aaPredicted RBP14.34□□□□□ -0.11
PRPF8-206ENST00000572723 AATFQ9NY61 560 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRPF8-206ENST00000572723 DBNLQ9UJU6 430 aaKnown RBP14.34□□□□□ -0.11
PRPF8-206ENST00000572723 PTPRFP10586 1907 aa14.34□□□□□ -0.11
PRPF8-206ENST00000572723 DOCK3Q8IZD9 2030 aa14.34□□□□□ -0.11
PRPF8-206ENST00000572723 DOCK1Q14185 1865 aa14.33□□□□□ -0.11
PRPF8-206ENST00000572723 TRIM75PA6NK02 468 aa14.33□□□□□ -0.12
PRPF8-206ENST00000572723 FAM196BA6NMK8 535 aa14.33□□□□□ -0.12
PRPF8-206ENST00000572723 PROCA1Q8NCQ7 364 aaPredicted RBP14.33□□□□□ -0.12
PRPF8-206ENST00000572723 ZNF280CQ8ND82 737 aa14.33□□□□□ -0.12
PRPF8-206ENST00000572723 RAET1EQ8TD07 263 aa14.33□□□□□ -0.12
PRPF8-206ENST00000572723 AGTPBP1Q9UPW5 1226 aa14.33□□□□□ -0.12
PRPF8-206ENST00000572723 MYO5AQ9Y4I1 1855 aaKnown RBP14.33□□□□□ -0.12
PRPF8-206ENST00000572723 ZSWIM8A7E2V4 1837 aa14.32□□□□□ -0.12
PRPF8-206ENST00000572723 MGAMO43451 1857 aa14.32□□□□□ -0.12
PRPF8-206ENST00000572723 USP17L5A8MUK1 530 aa14.32□□□□□ -0.12
PRPF8-206ENST00000572723 ECM2O94769 699 aaPredicted RBP14.32□□□□□ -0.12
PRPF8-206ENST00000572723 GRK4P32298 578 aa14.32□□□□□ -0.12
PRPF8-206ENST00000572723 SPP2Q13103 211 aa14.32□□□□□ -0.12
PRPF8-206ENST00000572723 HSP90AB4PQ58FF6 505 aa14.32□□□□□ -0.12
PRPF8-206ENST00000572723 TMED8Q6PL24 325 aaPredicted RBP14.32□□□□□ -0.12
PRPF8-206ENST00000572723 METTL16Q86W50 562 aaKnown RBP14.32□□□□□ -0.12
PRPF8-206ENST00000572723 PANK1Q8TE04 598 aa14.32□□□□□ -0.12
PRPF8-206ENST00000572723 TGFBRAP1Q8WUH2 860 aa14.32□□□□□ -0.12
PRPF8-206ENST00000572723 PIH1D3Q9NQM4 214 aaKnown RBP14.32□□□□□ -0.12
PRPF8-206ENST00000572723 GINM1Q9NU53 330 aa14.32□□□□□ -0.12
PRPF8-206ENST00000572723 PNMA3Q9UL41 463 aa14.32□□□□□ -0.12
PRPF8-206ENST00000572723 MYPNQ86TC9 1320 aa14.32□□□□□ -0.12
PRPF8-206ENST00000572723 PABPC4Q13310 644 aaKnown RBP eCLIP14.31□□□□□ -0.121e-8■■□□□ 12.2
PRPF8-206ENST00000572723 RRP1BQ14684 758 aaKnown RBP14.31□□□□□ -0.12
PRPF8-206ENST00000572723 CCDC84Q86UT8 332 aaPredicted RBP14.31□□□□□ -0.12
PRPF8-206ENST00000572723 CERS3Q8IU89 383 aa14.31□□□□□ -0.12
PRPF8-206ENST00000572723 SMCR8Q8TEV9 937 aaPredicted RBP14.31□□□□□ -0.12
PRPF8-206ENST00000572723 GCC1Q96CN9 775 aa14.31□□□□□ -0.12
PRPF8-206ENST00000572723 WDR18Q9BV38 432 aa14.31□□□□□ -0.12
PRPF8-206ENST00000572723 AS3MTQ9HBK9 375 aa14.31□□□□□ -0.12
PRPF8-206ENST00000572723 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.31□□□□□ -0.12
PRPF8-206ENST00000572723 MYCP01106 439 aaPredicted RBP14.3□□□□□ -0.12
PRPF8-206ENST00000572723 ASNSP08243 561 aa14.3□□□□□ -0.12
PRPF8-206ENST00000572723 CYP7A1P22680 504 aa14.3□□□□□ -0.12
PRPF8-206ENST00000572723 SH3D19Q5HYK7 790 aa14.3□□□□□ -0.12
PRPF8-206ENST00000572723 ADGRA1Q86SQ6 560 aa14.3□□□□□ -0.12
PRPF8-206ENST00000572723 MAPKAPK5Q8IW41 473 aa14.3□□□□□ -0.12
PRPF8-206ENST00000572723 RPAP2Q8IXW5 612 aaPredicted RBP14.3□□□□□ -0.12
PRPF8-206ENST00000572723 TLR7Q9NYK1 1049 aaKnown RBP14.3□□□□□ -0.12
PRPF8-206ENST00000572723 EXOC6BQ9Y2D4 811 aa14.3□□□□□ -0.12
PRPF8-206ENST00000572723 MKI67P46013 3256 aaKnown RBP14.3□□□□□ -0.12
PRPF8-206ENST00000572723 IDH1O75874 414 aaKnown RBP14.29□□□□□ -0.12
PRPF8-206ENST00000572723 GCLCP48506 637 aaPredicted RBP14.29□□□□□ -0.12
PRPF8-206ENST00000572723 UBXN2AP68543 259 aa14.29□□□□□ -0.12
PRPF8-206ENST00000572723 PRKCZQ05513 592 aa14.29□□□□□ -0.12
PRPF8-206ENST00000572723 MAP3K12Q12852 859 aa14.29□□□□□ -0.12
PRPF8-206ENST00000572723 MTFR1Q15390 333 aa14.29□□□□□ -0.12
PRPF8-206ENST00000572723 TREML2Q5T2D2 321 aa14.29□□□□□ -0.12
PRPF8-206ENST00000572723 AACSQ86V21 672 aa14.29□□□□□ -0.12
PRPF8-206ENST00000572723 SLAIN1Q8ND83 568 aa14.29□□□□□ -0.12
PRPF8-206ENST00000572723 NKX2-3Q8TAU0 364 aa14.29□□□□□ -0.12
PRPF8-206ENST00000572723 TRIM34Q9BYJ4 488 aa14.29□□□□□ -0.12
PRPF8-206ENST00000572723 BIN2Q9UBW5 565 aaPredicted RBP14.29□□□□□ -0.12
PRPF8-206ENST00000572723 PALD1Q9ULE6 856 aa14.29□□□□□ -0.12
PRPF8-206ENST00000572723 GABRQQ9UN88 632 aa14.29□□□□□ -0.12
PRPF8-206ENST00000572723 FLT1P17948 1338 aa14.29□□□□□ -0.12
PRPF8-206ENST00000572723 CDK5RAP2Q96SN8 1893 aa14.29□□□□□ -0.12
PRPF8-206ENST00000572723 CEP290O15078 2479 aa14.29□□□□□ -0.12
PRPF8-206ENST00000572723 C19orf81C9J6K1 198 aa14.28□□□□□ -0.12
PRPF8-206ENST00000572723 HLA-DOAP06340 250 aa14.28□□□□□ -0.12
PRPF8-206ENST00000572723 GJB1P08034 283 aa14.28□□□□□ -0.12
PRPF8-206ENST00000572723 HMGCS2P54868 508 aa14.28□□□□□ -0.12
PRPF8-206ENST00000572723 DYNLL1P63167 89 aaKnown RBP14.28□□□□□ -0.12
PRPF8-206ENST00000572723 IRF5Q13568 498 aa14.28□□□□□ -0.12
PRPF8-206ENST00000572723 FAM110CQ1W6H9 321 aa14.28□□□□□ -0.12
PRPF8-206ENST00000572723 CRACR2BQ8N4Y2 399 aaPredicted RBP14.28□□□□□ -0.12
PRPF8-206ENST00000572723 ANKRD13CQ8N6S4 541 aa14.28□□□□□ -0.12
PRPF8-206ENST00000572723 RHPN1Q8TCX5 695 aa14.28□□□□□ -0.12
PRPF8-206ENST00000572723 PXYLP1Q8TE99 480 aa14.28□□□□□ -0.12
PRPF8-206ENST00000572723 ATAD5Q96QE3 1844 aa14.28□□□□□ -0.12
PRPF8-206ENST00000572723 CHMP4BQ9H444 224 aaKnown RBP14.28□□□□□ -0.12
PRPF8-206ENST00000572723 DDX19BQ9UMR2 479 aa14.28□□□□□ -0.12
PRPF8-206ENST00000572723 FOCADQ5VW36 1801 aa14.27□□□□□ -0.12
PRPF8-206ENST00000572723 TNPO2O14787 897 aaKnown RBP14.27□□□□□ -0.13
PRPF8-206ENST00000572723 ADCY3O60266 1144 aa14.27□□□□□ -0.13
PRPF8-206ENST00000572723 HMMRO75330 724 aa14.27□□□□□ -0.13
PRPF8-206ENST00000572723 CAPN2P17655 700 aa14.27□□□□□ -0.13
PRPF8-206ENST00000572723 HOXA7P31268 230 aaPredicted RBP14.27□□□□□ -0.13
PRPF8-206ENST00000572723 FLT3LGP49771 235 aa14.27□□□□□ -0.13
PRPF8-206ENST00000572723 BACE1P56817 501 aa14.27□□□□□ -0.13
PRPF8-206ENST00000572723 TTF1Q15361 905 aaPredicted RBP14.27□□□□□ -0.13
PRPF8-206ENST00000572723 CLASRPQ8N2M8 674 aaKnown RBP14.27□□□□□ -0.13
PRPF8-206ENST00000572723 MAGEB6Q8N7X4 407 aa14.27□□□□□ -0.13
PRPF8-206ENST00000572723 COA7Q96BR5 231 aa14.27□□□□□ -0.13
PRPF8-206ENST00000572723 ANTXR1Q9H6X2 564 aa14.27□□□□□ -0.13
PRPF8-206ENST00000572723 ZBTB40Q9NUA8 1239 aa14.27□□□□□ -0.13
PRPF8-206ENST00000572723 BRCA2P51587 3418 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms