RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 GOLIM4O00461 696 aa30.58■■■□□ 2.49
FANCA-228ENST00000567943 CCDC84Q86UT8 332 aaPredicted RBP30.58■■■□□ 2.49
FANCA-228ENST00000567943 DNAJC2Q99543 621 aaKnown RBP30.58■■■□□ 2.49
FANCA-228ENST00000567943 ZFYVE28Q9HCC9 887 aa30.58■■■□□ 2.49
FANCA-228ENST00000567943 PICK1Q9NRD5 415 aa30.58■■■□□ 2.49
FANCA-228ENST00000567943 CXCL11O14625 94 aa30.57■■■□□ 2.48
FANCA-228ENST00000567943 ATP5JP18859 108 aa30.57■■■□□ 2.48
FANCA-228ENST00000567943 TTF1Q15361 905 aaPredicted RBP30.57■■■□□ 2.48
FANCA-228ENST00000567943 PKN2Q16513 984 aaKnown RBP30.57■■■□□ 2.48
FANCA-228ENST00000567943 CD99L2Q8TCZ2 262 aa30.57■■■□□ 2.48
FANCA-228ENST00000567943 DHX36Q9H2U1 1008 aaKnown RBP30.57■■■□□ 2.48
FANCA-228ENST00000567943 DNAJC18Q9H819 358 aa30.57■■■□□ 2.48
FANCA-228ENST00000567943 PI4KBQ9UBF8 816 aa30.57■■■□□ 2.48
FANCA-228ENST00000567943 PALD1Q9ULE6 856 aa30.57■■■□□ 2.48
FANCA-228ENST00000567943 PDE6AP16499 860 aa30.56■■■□□ 2.48
FANCA-228ENST00000567943 SP3Q02447 781 aa30.56■■■□□ 2.48
FANCA-228ENST00000567943 METTL16Q86W50 562 aaKnown RBP30.56■■■□□ 2.48
FANCA-228ENST00000567943 RIOK1Q9BRS2 568 aaKnown RBP30.56■■■□□ 2.48
FANCA-228ENST00000567943 BOLA2Q9H3K6 86 aa30.56■■■□□ 2.48
FANCA-228ENST00000567943 HPS5Q9UPZ3 1129 aa30.56■■■□□ 2.48
FANCA-228ENST00000567943 SUPT16HQ9Y5B9 1047 aaKnown RBP30.56■■■□□ 2.48
FANCA-228ENST00000567943 ZSWIM8A7E2V4 1837 aa30.55■■■□□ 2.48
FANCA-228ENST00000567943 TCRBV5S4A2TA0A5A2 114 aa30.55■■■□□ 2.48
FANCA-228ENST00000567943 GPAT2Q6NUI2 795 aa30.55■■■□□ 2.48
FANCA-228ENST00000567943 TMED8Q6PL24 325 aaPredicted RBP30.55■■■□□ 2.48
FANCA-228ENST00000567943 OTOP1Q7RTM1 612 aa30.55■■■□□ 2.48
FANCA-228ENST00000567943 ANKRD23Q86SG2 305 aa30.55■■■□□ 2.48
FANCA-228ENST00000567943 SAP30BPQ9UHR5 308 aaKnown RBP30.55■■■□□ 2.48
FANCA-228ENST00000567943 HERC5Q9UII4 1024 aaKnown RBP30.55■■■□□ 2.48
FANCA-228ENST00000567943 A0A0G2JLL6 359 aaPredicted RBP30.54■■■□□ 2.48
FANCA-228ENST00000567943 TLR2O60603 784 aa30.54■■■□□ 2.48
FANCA-228ENST00000567943 SLC9C2Q5TAH2 1124 aa30.54■■■□□ 2.48
FANCA-228ENST00000567943 PRRT2Q7Z6L0 340 aaPredicted RBP30.54■■■□□ 2.48
FANCA-228ENST00000567943 DDX60LQ5H9U9 1706 aaKnown RBP30.53■■■□□ 2.48
FANCA-228ENST00000567943 PDHXO00330 501 aa30.53■■■□□ 2.48
FANCA-228ENST00000567943 CAP2P40123 477 aa30.53■■■□□ 2.48
FANCA-228ENST00000567943 FBXO46Q6PJ61 603 aaPredicted RBP30.53■■■□□ 2.48
FANCA-228ENST00000567943 ERO1AQ96HE7 468 aa30.53■■■□□ 2.48
FANCA-228ENST00000567943 HAUS7Q99871 368 aa30.53■■■□□ 2.48
FANCA-228ENST00000567943 TRIM17Q9Y577 477 aa30.53■■■□□ 2.48
FANCA-228ENST00000567943 MYH7P12883 1935 aa30.53■■■□□ 2.48
FANCA-228ENST00000567943 JAG1P78504 1218 aa30.52■■■□□ 2.48
FANCA-228ENST00000567943 SLFNL1Q499Z3 407 aa30.52■■■□□ 2.48
FANCA-228ENST00000567943 PAG1Q9NWQ8 432 aa30.52■■■□□ 2.48
FANCA-228ENST00000567943 ADGRA2Q96PE1 1338 aa30.51■■■□□ 2.48
FANCA-228ENST00000567943 ZNF532Q9HCE3 1301 aa30.51■■■□□ 2.48
FANCA-228ENST00000567943 SLC4A8Q2Y0W8 1093 aa30.51■■■□□ 2.47
FANCA-228ENST00000567943 CERS3Q8IU89 383 aa30.51■■■□□ 2.47
FANCA-228ENST00000567943 AAMPQ13685 434 aa30.5■■■□□ 2.47
FANCA-228ENST00000567943 SHROOM1Q2M3G4 852 aaPredicted RBP30.5■■■□□ 2.47
FANCA-228ENST00000567943 FOXP4Q8IVH2 680 aaPredicted RBP30.5■■■□□ 2.47
FANCA-228ENST00000567943 TRIM75PA6NK02 468 aa30.49■■■□□ 2.47
FANCA-228ENST00000567943 CHGBP05060 677 aa30.49■■■□□ 2.47
FANCA-228ENST00000567943 C17orf99Q6UX52 265 aa30.49■■■□□ 2.47
FANCA-228ENST00000567943 EXOC6Q8TAG9 804 aa30.49■■■□□ 2.47
FANCA-228ENST00000567943 ECHDC1Q9NTX5 307 aa30.49■■■□□ 2.47
FANCA-228ENST00000567943 BRCA2P51587 3418 aa30.49■■■□□ 2.47
FANCA-228ENST00000567943 NAV1Q8NEY1 1877 aa30.48■■■□□ 2.47
FANCA-228ENST00000567943 MAGEB6P1A0A0J9YX57 407 aa30.48■■■□□ 2.47
FANCA-228ENST00000567943 USP5P45974 858 aa30.48■■■□□ 2.47
FANCA-228ENST00000567943 RGS19P49795 217 aa30.48■■■□□ 2.47
FANCA-228ENST00000567943 LOC285556D6RIA3 1793 aa30.47■■■□□ 2.47
FANCA-228ENST00000567943 HDAC1Q13547 482 aaPredicted RBP30.47■■■□□ 2.47
FANCA-228ENST00000567943 ADD2P35612 726 aa30.46■■■□□ 2.47
FANCA-228ENST00000567943 FASTKD5Q7L8L6 764 aaKnown RBP30.46■■■□□ 2.47
FANCA-228ENST00000567943 GPATCH3Q96I76 525 aa30.46■■■□□ 2.47
FANCA-228ENST00000567943 ARHGAP39Q9C0H5 1083 aa30.46■■■□□ 2.47
FANCA-228ENST00000567943 EFCC1Q9HA90 598 aa30.46■■■□□ 2.47
FANCA-228ENST00000567943 CPA4Q9UI42 421 aa30.46■■■□□ 2.47
FANCA-228ENST00000567943 TNRC18O15417 2968 aaPredicted RBP30.45■■■□□ 2.47
FANCA-228ENST00000567943 CYP2C8P10632 490 aa30.45■■■□□ 2.47
FANCA-228ENST00000567943 SPP2Q13103 211 aa30.45■■■□□ 2.47
FANCA-228ENST00000567943 TSHZ3Q63HK5 1081 aa30.45■■■□□ 2.47
FANCA-228ENST00000567943 GADL1Q6ZQY3 521 aa30.45■■■□□ 2.47
FANCA-228ENST00000567943 LCORLQ8N3X6 602 aa30.45■■■□□ 2.47
FANCA-228ENST00000567943 CRACR2BQ8N4Y2 399 aaPredicted RBP30.45■■■□□ 2.47
FANCA-228ENST00000567943 PTPN22Q9Y2R2 807 aa30.45■■■□□ 2.47
FANCA-228ENST00000567943 ZNF280CQ8ND82 737 aa30.44■■■□□ 2.46
FANCA-228ENST00000567943 USP17L5A8MUK1 530 aa30.43■■■□□ 2.46
FANCA-228ENST00000567943 HLA-DOAP06340 250 aa30.43■■■□□ 2.46
FANCA-228ENST00000567943 CTGFP29279 349 aa30.43■■■□□ 2.46
FANCA-228ENST00000567943 PLCD1P51178 756 aa30.43■■■□□ 2.46
FANCA-228ENST00000567943 LACTBP83111 547 aaPredicted RBP30.43■■■□□ 2.46
FANCA-228ENST00000567943 EVX2Q03828 476 aa30.43■■■□□ 2.46
FANCA-228ENST00000567943 GDF11O95390 407 aa30.42■■■□□ 2.46
FANCA-228ENST00000567943 SOX10P56693 466 aa30.42■■■□□ 2.46
FANCA-228ENST00000567943 TREML2Q5T2D2 321 aa30.42■■■□□ 2.46
FANCA-228ENST00000567943 ANKRD45Q5TZF3 282 aa30.42■■■□□ 2.46
FANCA-228ENST00000567943 SDR42E1Q8WUS8 393 aa30.42■■■□□ 2.46
FANCA-228ENST00000567943 GCC1Q96CN9 775 aa30.42■■■□□ 2.46
FANCA-228ENST00000567943 EHD4Q9H223 541 aa30.42■■■□□ 2.46
FANCA-228ENST00000567943 ARMT1Q9H993 441 aa30.42■■■□□ 2.46
FANCA-228ENST00000567943 ZBTB47Q9UFB7 747 aaPredicted RBP30.42■■■□□ 2.46
FANCA-228ENST00000567943 TATDN1Q6P1N9 297 aa30.41■■■□□ 2.46
FANCA-228ENST00000567943 OTUD7AQ8TE49 926 aaPredicted RBP30.41■■■□□ 2.46
FANCA-228ENST00000567943 PARK7Q99497 189 aaKnown RBP30.41■■■□□ 2.46
FANCA-228ENST00000567943 CRNKL1Q9BZJ0 848 aaKnown RBP30.41■■■□□ 2.46
FANCA-228ENST00000567943 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.41■■■□□ 2.463e-14■■■■■ 44.3
FANCA-228ENST00000567943 SLC45A1Q9Y2W3 748 aa30.41■■■□□ 2.46
FANCA-228ENST00000567943 BAZ2AQ9UIF9 1905 aaKnown RBP30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms