RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 TNIP1Q15025 636 aa17.19■□□□□ 0.34
COMMD4-221ENST00000567935 BRF1Q92994 677 aa17.19■□□□□ 0.34
COMMD4-221ENST00000567935 TMX4Q9H1E5 349 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-221ENST00000567935 RNF41Q9H4P4 317 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-221ENST00000567935 ARMT1Q9H993 441 aa17.19■□□□□ 0.34
COMMD4-221ENST00000567935 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
COMMD4-221ENST00000567935 ZBTB12Q9Y330 459 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-221ENST00000567935 ZDHHC9Q9Y397 364 aa17.19■□□□□ 0.34
COMMD4-221ENST00000567935 ATP6V0A2Q9Y487 856 aa17.19■□□□□ 0.34
COMMD4-221ENST00000567935 SLC4A4Q9Y6R1 1079 aa17.19■□□□□ 0.34
COMMD4-221ENST00000567935 HTTP42858 3142 aa17.19■□□□□ 0.34
COMMD4-221ENST00000567935 GSG1L2A8MUP6 293 aa17.18■□□□□ 0.34
COMMD4-221ENST00000567935 STX6O43752 255 aa17.18■□□□□ 0.34
COMMD4-221ENST00000567935 GJB2P29033 226 aa17.18■□□□□ 0.34
COMMD4-221ENST00000567935 TDO2P48775 406 aa17.18■□□□□ 0.34
COMMD4-221ENST00000567935 NT5C2P49902 561 aa17.18■□□□□ 0.34
COMMD4-221ENST00000567935 HAND2P61296 217 aa17.18■□□□□ 0.34
COMMD4-221ENST00000567935 TBC1D10BQ4KMP7 808 aaPredicted RBP17.18■□□□□ 0.34
COMMD4-221ENST00000567935 REM2Q8IYK8 340 aaPredicted RBP17.18■□□□□ 0.34
COMMD4-221ENST00000567935 LCORLQ8N3X6 602 aa17.18■□□□□ 0.34
COMMD4-221ENST00000567935 NSUN4Q96CB9 384 aaKnown RBP17.18■□□□□ 0.34
COMMD4-221ENST00000567935 TCEANC2Q96MN5 208 aa17.18■□□□□ 0.34
COMMD4-221ENST00000567935 RTFDC1Q9BY42 306 aaPredicted RBP17.18■□□□□ 0.34
COMMD4-221ENST00000567935 KRT23Q9C075 422 aa17.18■□□□□ 0.34
COMMD4-221ENST00000567935 POLR2AP24928 1970 aaKnown RBP17.17■□□□□ 0.34
COMMD4-221ENST00000567935 WTIPA6NIX2 430 aaPredicted RBP17.17■□□□□ 0.34
COMMD4-221ENST00000567935 GPR25O00155 361 aa17.17■□□□□ 0.34
COMMD4-221ENST00000567935 PRC1O43663 620 aa17.17■□□□□ 0.34
COMMD4-221ENST00000567935 IL1R1P14778 569 aa17.17■□□□□ 0.34
COMMD4-221ENST00000567935 HMGN5P82970 282 aaKnown RBP17.17■□□□□ 0.34
COMMD4-221ENST00000567935 KIAA2012Q0VF49 1180 aa17.17■□□□□ 0.34
COMMD4-221ENST00000567935 ST3GAL1Q11201 340 aa17.17■□□□□ 0.34
COMMD4-221ENST00000567935 PKP1Q13835 747 aa17.17■□□□□ 0.34
COMMD4-221ENST00000567935 SLC17A8Q8NDX2 589 aa17.17■□□□□ 0.34
COMMD4-221ENST00000567935 TMEM87BQ96K49 555 aa17.17■□□□□ 0.34
COMMD4-221ENST00000567935 RIOK1Q9BRS2 568 aaKnown RBP17.17■□□□□ 0.34
COMMD4-221ENST00000567935 EPB41L4AQ9HCS5 686 aaPredicted RBP17.17■□□□□ 0.34
COMMD4-221ENST00000567935 ANAPC4Q9UJX5 808 aa17.17■□□□□ 0.34
COMMD4-221ENST00000567935 DHX16O60231 1041 aaKnown RBP17.16■□□□□ 0.34
COMMD4-221ENST00000567935 TRAK2O60296 914 aa17.16■□□□□ 0.34
COMMD4-221ENST00000567935 LDHCP07864 332 aa17.16■□□□□ 0.34
COMMD4-221ENST00000567935 ZSCAN22P10073 491 aaPredicted RBP17.16■□□□□ 0.34
COMMD4-221ENST00000567935 SYT1P21579 422 aa17.16■□□□□ 0.34
COMMD4-221ENST00000567935 MECOMQ03112 1051 aa17.16■□□□□ 0.34
COMMD4-221ENST00000567935 CHAF1AQ13111 956 aaPredicted RBP17.16■□□□□ 0.34
COMMD4-221ENST00000567935 TXNRD3Q86VQ6 643 aa17.16■□□□□ 0.34
COMMD4-221ENST00000567935 DZIP1Q86YF9 867 aaKnown RBP17.16■□□□□ 0.34
COMMD4-221ENST00000567935 NECAB1Q8N987 351 aa17.16■□□□□ 0.34
COMMD4-221ENST00000567935 SUPT20HQ8NEM7 779 aa17.16■□□□□ 0.34
COMMD4-221ENST00000567935 TBC1D16Q8TBP0 767 aa17.16■□□□□ 0.34
COMMD4-221ENST00000567935 TBC1D22AQ8WUA7 517 aa17.16■□□□□ 0.34
COMMD4-221ENST00000567935 STAG1Q8WVM7 1258 aa17.16■□□□□ 0.34
COMMD4-221ENST00000567935 DCPSQ96C86 337 aaKnown RBP17.16■□□□□ 0.34
COMMD4-221ENST00000567935 LARP6Q9BRS8 491 aaKnown RBP17.16■□□□□ 0.34
COMMD4-221ENST00000567935 BRCA2P51587 3418 aa17.16■□□□□ 0.34
COMMD4-221ENST00000567935 LDHBP07195 334 aaKnown RBP17.15■□□□□ 0.34
COMMD4-221ENST00000567935 COL9A3Q14050 684 aaPredicted RBP17.15■□□□□ 0.34
COMMD4-221ENST00000567935 AKNAD1Q5T1N1 836 aa17.15■□□□□ 0.34
COMMD4-221ENST00000567935 TBC1D10CQ8IV04 446 aa17.15■□□□□ 0.34
COMMD4-221ENST00000567935 MIGA1Q8NAN2 632 aa17.15■□□□□ 0.34
COMMD4-221ENST00000567935 CRNKL1Q9BZJ0 848 aaKnown RBP17.15■□□□□ 0.34
COMMD4-221ENST00000567935 CD209Q9NNX6 404 aa17.15■□□□□ 0.34
COMMD4-221ENST00000567935 PAPPA2Q9BXP8 1791 aa17.15■□□□□ 0.34
COMMD4-221ENST00000567935 RBM26Q5T8P6 1007 aaKnown RBP17.14■□□□□ 0.33
COMMD4-221ENST00000567935 MFSD6Q6ZSS7 791 aa17.14■□□□□ 0.33
COMMD4-221ENST00000567935 SLF2Q8IX21 1173 aa17.14■□□□□ 0.33
COMMD4-221ENST00000567935 RGS22Q8NE09 1264 aa17.14■□□□□ 0.33
COMMD4-221ENST00000567935 SMARCC2Q8TAQ2 1214 aa17.14■□□□□ 0.33
COMMD4-221ENST00000567935 COA1Q9GZY4 146 aa17.14■□□□□ 0.33
COMMD4-221ENST00000567935 NBPF3Q9H094 633 aa17.14■□□□□ 0.33
COMMD4-221ENST00000567935 ATP8A2Q9NTI2 1148 aa17.14■□□□□ 0.33
COMMD4-221ENST00000567935 SUGT1Q9Y2Z0 365 aa17.14■□□□□ 0.33
COMMD4-221ENST00000567935 GSE1Q14687 1217 aa17.13■□□□□ 0.33
COMMD4-221ENST00000567935 SART3Q15020 963 aaKnown RBP17.13■□□□□ 0.33
COMMD4-221ENST00000567935 NOM1Q5C9Z4 860 aaKnown RBP17.13■□□□□ 0.33
COMMD4-221ENST00000567935 DPP8Q6V1X1 898 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-221ENST00000567935 ADGRA1Q86SQ6 560 aa17.13■□□□□ 0.33
COMMD4-221ENST00000567935 DPF2Q92785 391 aa17.13■□□□□ 0.33
COMMD4-221ENST00000567935 CDCA5Q96FF9 252 aa17.13■□□□□ 0.33
COMMD4-221ENST00000567935 NOL10Q9BSC4 688 aaKnown RBP17.13■□□□□ 0.33
COMMD4-221ENST00000567935 R3HDMLQ9H3Y0 253 aa17.13■□□□□ 0.33
COMMD4-221ENST00000567935 ANGEL1Q9UNK9 670 aaKnown RBP17.13■□□□□ 0.33
COMMD4-221ENST00000567935 ASTN2O75129 1339 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-221ENST00000567935 FAM205AQ6ZU69 1335 aa17.13■□□□□ 0.33
COMMD4-221ENST00000567935 CENPFP49454 3210 aa17.13■□□□□ 0.33
COMMD4-221ENST00000567935 C6orf229H3BNL8 230 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 PSMD14O00487 310 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 BAG3O95817 575 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 F13A1P00488 732 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 PRDX5P30044 214 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 PDIA3P30101 505 aaKnown RBP17.12■□□□□ 0.33
COMMD4-221ENST00000567935 LIFRP42702 1097 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 ANTXR2P58335 489 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 PPP4CP60510 307 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 APOBRQ0VD83 1088 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 SCRN1Q12765 414 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 CSPP1Q1MSJ5 1256 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 LARP1BQ659C4 914 aaKnown RBP17.12■□□□□ 0.33
COMMD4-221ENST00000567935 MCTP1Q6DN14 999 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 MPNDQ8N594 471 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms