RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 ITPRIPQ8IWB1 547 aa12.77□□□□□ -0.37
LINC00564-201ENST00000567258 TMEM57Q8N5G2 664 aa12.77□□□□□ -0.37
LINC00564-201ENST00000567258 FAM151AQ8WW52 585 aa12.77□□□□□ -0.37
LINC00564-201ENST00000567258 XAGE2Q96GT9 111 aa12.77□□□□□ -0.37
LINC00564-201ENST00000567258 ZNF341Q9BYN7 854 aa12.77□□□□□ -0.37
LINC00564-201ENST00000567258 USP40Q9NVE5 1235 aa12.77□□□□□ -0.37
LINC00564-201ENST00000567258 RABGEF1Q9UJ41 708 aa12.77□□□□□ -0.37
LINC00564-201ENST00000567258 DAGLAQ9Y4D2 1042 aa12.77□□□□□ -0.37
LINC00564-201ENST00000567258 ARHGEF6Q15052 776 aa12.76□□□□□ -0.37
LINC00564-201ENST00000567258 CDC42EP5Q6NZY7 148 aa12.76□□□□□ -0.37
LINC00564-201ENST00000567258 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.76□□□□□ -0.37
LINC00564-201ENST00000567258 ERICH6Q7L0X2 663 aa12.76□□□□□ -0.37
LINC00564-201ENST00000567258 ERO1BQ86YB8 467 aa12.76□□□□□ -0.37
LINC00564-201ENST00000567258 ZSCAN29Q8IWY8 852 aaPredicted RBP12.76□□□□□ -0.37
LINC00564-201ENST00000567258 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC00564-201ENST00000567258 ERO1AQ96HE7 468 aa12.76□□□□□ -0.37
LINC00564-201ENST00000567258 PCDHGA10Q9Y5H3 936 aa12.76□□□□□ -0.37
LINC00564-201ENST00000567258 PDS5AQ29RF7 1337 aaKnown RBP12.76□□□□□ -0.37
LINC00564-201ENST00000567258 RPAP1Q9BWH6 1393 aaPredicted RBP12.76□□□□□ -0.37
LINC00564-201ENST00000567258 CCL15-CCL14A0A0B4J2E2 113 aa12.75□□□□□ -0.37
LINC00564-201ENST00000567258 IGF2BP3O00425 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC00564-201ENST00000567258 LDHCP07864 332 aa12.75□□□□□ -0.37
LINC00564-201ENST00000567258 CETPP11597 493 aa12.75□□□□□ -0.37
LINC00564-201ENST00000567258 MS4A1P11836 297 aa12.75□□□□□ -0.37
LINC00564-201ENST00000567258 GSTO1P78417 241 aa12.75□□□□□ -0.37
LINC00564-201ENST00000567258 RASGRF1Q13972 1273 aa12.75□□□□□ -0.37
LINC00564-201ENST00000567258 CCL15Q16663 113 aa12.75□□□□□ -0.37
LINC00564-201ENST00000567258 ZBED9Q6R2W3 1325 aa12.75□□□□□ -0.37
LINC00564-201ENST00000567258 MIGA2Q7L4E1 593 aa12.75□□□□□ -0.37
LINC00564-201ENST00000567258 NOL10Q9BSC4 688 aaKnown RBP12.75□□□□□ -0.37
LINC00564-201ENST00000567258 TNNQ9UQP3 1299 aa12.75□□□□□ -0.37
LINC00564-201ENST00000567258 PNMA6EA0A0J9YXQ4 647 aa12.74□□□□□ -0.37
LINC00564-201ENST00000567258 UQCRFS1P1P0C7P4 283 aa12.74□□□□□ -0.37
LINC00564-201ENST00000567258 COL9A1P20849 921 aa12.74□□□□□ -0.37
LINC00564-201ENST00000567258 GJA5P36382 358 aa12.74□□□□□ -0.37
LINC00564-201ENST00000567258 SNAPC2Q13487 334 aa12.74□□□□□ -0.37
LINC00564-201ENST00000567258 TAF1CQ15572 869 aaPredicted RBP12.74□□□□□ -0.37
LINC00564-201ENST00000567258 CCDC158Q5M9N0 1113 aa12.74□□□□□ -0.37
LINC00564-201ENST00000567258 FBXO46Q6PJ61 603 aaPredicted RBP12.74□□□□□ -0.37
LINC00564-201ENST00000567258 ZKSCAN4Q969J2 545 aaPredicted RBP12.74□□□□□ -0.37
LINC00564-201ENST00000567258 ZFYVE28Q9HCC9 887 aa12.74□□□□□ -0.37
LINC00564-201ENST00000567258 EMILIN3Q9NT22 766 aa12.74□□□□□ -0.37
LINC00564-201ENST00000567258 TESPA1A2RU30 521 aaPredicted RBP12.73□□□□□ -0.37
LINC00564-201ENST00000567258 SPDYE5A6NIY4 337 aa12.73□□□□□ -0.37
LINC00564-201ENST00000567258 SURF6O75683 361 aaKnown RBP12.73□□□□□ -0.37
LINC00564-201ENST00000567258 RGS19P49795 217 aa12.73□□□□□ -0.37
LINC00564-201ENST00000567258 ATP8B2P98198 1209 aa12.73□□□□□ -0.37
LINC00564-201ENST00000567258 SP3Q02447 781 aa12.73□□□□□ -0.37
LINC00564-201ENST00000567258 CRHR2Q13324 411 aa12.73□□□□□ -0.37
LINC00564-201ENST00000567258 TTC39AQ5SRH9 613 aa12.73□□□□□ -0.37
LINC00564-201ENST00000567258 SPATA5Q8NB90 893 aa12.73□□□□□ -0.37
LINC00564-201ENST00000567258 RAI14Q9P0K7 980 aa12.73□□□□□ -0.37
LINC00564-201ENST00000567258 LRP2BPQ9P2M1 347 aa12.73□□□□□ -0.37
LINC00564-201ENST00000567258 HPS5Q9UPZ3 1129 aa12.73□□□□□ -0.37
LINC00564-201ENST00000567258 TRIM17Q9Y577 477 aa12.73□□□□□ -0.37
LINC00564-201ENST00000567258 GTPBP6O43824 516 aaPredicted RBP12.72□□□□□ -0.37
LINC00564-201ENST00000567258 ENTPD3O75355 529 aa12.72□□□□□ -0.37
LINC00564-201ENST00000567258 BTDP43251 543 aa12.72□□□□□ -0.37
LINC00564-201ENST00000567258 RGS3P49796 1198 aa12.72□□□□□ -0.37
LINC00564-201ENST00000567258 PPATQ06203 517 aa12.72□□□□□ -0.37
LINC00564-201ENST00000567258 PPIL2Q13356 520 aa12.72□□□□□ -0.37
LINC00564-201ENST00000567258 KIF22Q14807 665 aa12.72□□□□□ -0.37
LINC00564-201ENST00000567258 R3HDMLQ9H3Y0 253 aa12.72□□□□□ -0.37
LINC00564-201ENST00000567258 SNCAIPQ9Y6H5 919 aa12.72□□□□□ -0.37
LINC00564-201ENST00000567258 MROH7-TTC4A0A0A0MT08 1334 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 GAKO14976 1311 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 ARID4AP29374 1257 aaPredicted RBP12.71□□□□□ -0.37
LINC00564-201ENST00000567258 SOX10P56693 466 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 MECOMQ03112 1051 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 NFIAQ12857 509 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 PICALMQ13492 652 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 MFSD10Q14728 455 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 SSH3Q8TE77 659 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 BRI3BPQ8WY22 251 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 PTPN18Q99952 460 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 IDI2Q9BXS1 227 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 C1orf115Q9H7X2 142 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 EFCC1Q9HA90 598 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 ZCCHC17Q9NP64 241 aaKnown RBP12.71□□□□□ -0.37
LINC00564-201ENST00000567258 GPR108Q9NPR9 543 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 PICK1Q9NRD5 415 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 HMG20BQ9P0W2 317 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 FAM198AQ9UFP1 575 aa12.71□□□□□ -0.37
LINC00564-201ENST00000567258 MYO5AQ9Y4I1 1855 aaKnown RBP12.7□□□□□ -0.38
LINC00564-201ENST00000567258 IRF6O14896 467 aa12.7□□□□□ -0.38
LINC00564-201ENST00000567258 MAP4K4O95819 1239 aaPredicted RBP12.7□□□□□ -0.38
LINC00564-201ENST00000567258 INPP5BP32019 993 aa12.7□□□□□ -0.38
LINC00564-201ENST00000567258 TNNI3KQ59H18 835 aa12.7□□□□□ -0.38
LINC00564-201ENST00000567258 CD99L2Q8TCZ2 262 aa12.7□□□□□ -0.38
LINC00564-201ENST00000567258 FPGT-TNNI3KV9GXZ4 949 aa12.7□□□□□ -0.38
LINC00564-201ENST00000567258 DOCK1Q14185 1865 aa12.7□□□□□ -0.38
LINC00564-201ENST00000567258 MAST2Q6P0Q8 1798 aa12.69□□□□□ -0.38
LINC00564-201ENST00000567258 SOWAHBA6NEL2 793 aa12.69□□□□□ -0.38
LINC00564-201ENST00000567258 ZBTB7BO15156 539 aaPredicted RBP12.69□□□□□ -0.38
LINC00564-201ENST00000567258 BAG3O95817 575 aa12.69□□□□□ -0.38
LINC00564-201ENST00000567258 HSP90AB4PQ58FF6 505 aa12.69□□□□□ -0.38
LINC00564-201ENST00000567258 TYW1BQ6NUM6 668 aa12.69□□□□□ -0.38
LINC00564-201ENST00000567258 TBC1D9Q6ZT07 1266 aa12.69□□□□□ -0.38
LINC00564-201ENST00000567258 OTOP1Q7RTM1 612 aa12.69□□□□□ -0.38
LINC00564-201ENST00000567258 LAPTM4BQ86VI4 370 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms