RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 RBBP6Q7Z6E9 1792 aaKnown RBP18.55■□□□□ 0.56
CMTM3-212ENST00000566121 ZAP70P43403 619 aa18.54■□□□□ 0.56
CMTM3-212ENST00000566121 PRPF38BQ5VTL8 546 aaKnown RBP18.54■□□□□ 0.56
CMTM3-212ENST00000566121 SH3RF3Q8TEJ3 882 aaPredicted RBP18.54■□□□□ 0.56
CMTM3-212ENST00000566121 SNRKQ9NRH2 765 aa18.54■□□□□ 0.56
CMTM3-212ENST00000566121 TAOK2Q9UL54 1235 aa18.54■□□□□ 0.56
CMTM3-212ENST00000566121 PTCH2Q9Y6C5 1203 aa18.54■□□□□ 0.56
CMTM3-212ENST00000566121 RAB11FIP3O75154 756 aa18.53■□□□□ 0.56
CMTM3-212ENST00000566121 HMMRO75330 724 aa18.53■□□□□ 0.56
CMTM3-212ENST00000566121 PDE3AQ14432 1141 aa18.53■□□□□ 0.56
CMTM3-212ENST00000566121 SLC9C1Q4G0N8 1177 aa18.53■□□□□ 0.56
CMTM3-212ENST00000566121 ZNF280CQ8ND82 737 aa18.53■□□□□ 0.56
CMTM3-212ENST00000566121 RHPN1Q8TCX5 695 aa18.53■□□□□ 0.56
CMTM3-212ENST00000566121 TRIM47Q96LD4 638 aa18.53■□□□□ 0.56
CMTM3-212ENST00000566121 CCDC8Q9H0W5 538 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-212ENST00000566121 AGTPBP1Q9UPW5 1226 aa18.53■□□□□ 0.56
CMTM3-212ENST00000566121 USP17L5A8MUK1 530 aa18.52■□□□□ 0.56
CMTM3-212ENST00000566121 PSMC4P43686 418 aa18.52■□□□□ 0.56
CMTM3-212ENST00000566121 KIF1BPQ96EK5 621 aa18.52■□□□□ 0.56
CMTM3-212ENST00000566121 TMEM106CQ9BVX2 250 aa18.52■□□□□ 0.56
CMTM3-212ENST00000566121 PIH1D3Q9NQM4 214 aaKnown RBP18.52■□□□□ 0.56
CMTM3-212ENST00000566121 AATFQ9NY61 560 aaKnown RBP eCLIP18.52■□□□□ 0.56
CMTM3-212ENST00000566121 CPA4Q9UI42 421 aa18.52■□□□□ 0.56
CMTM3-212ENST00000566121 PHIPQ8WWQ0 1821 aa18.51■□□□□ 0.55
CMTM3-212ENST00000566121 ASNSP08243 561 aa18.51■□□□□ 0.55
CMTM3-212ENST00000566121 CTGFP29279 349 aa18.51■□□□□ 0.55
CMTM3-212ENST00000566121 MAP3K12Q12852 859 aa18.51■□□□□ 0.55
CMTM3-212ENST00000566121 PABPC4Q13310 644 aaKnown RBP eCLIP18.51■□□□□ 0.55
CMTM3-212ENST00000566121 TTF1Q15361 905 aaPredicted RBP18.51■□□□□ 0.55
CMTM3-212ENST00000566121 ADGRA1Q86SQ6 560 aa18.51■□□□□ 0.55
CMTM3-212ENST00000566121 ARHGAP39Q9C0H5 1083 aa18.51■□□□□ 0.55
CMTM3-212ENST00000566121 AS3MTQ9HBK9 375 aa18.51■□□□□ 0.55
CMTM3-212ENST00000566121 TLR7Q9NYK1 1049 aaKnown RBP18.51■□□□□ 0.55
CMTM3-212ENST00000566121 PNMA3Q9UL41 463 aa18.51■□□□□ 0.55
CMTM3-212ENST00000566121 DOCK1Q14185 1865 aa18.51■□□□□ 0.55
CMTM3-212ENST00000566121 FLT1P17948 1338 aa18.5■□□□□ 0.55
CMTM3-212ENST00000566121 MAST2Q6P0Q8 1798 aa18.5■□□□□ 0.55
CMTM3-212ENST00000566121 POTEFA5A3E0 1075 aa18.5■□□□□ 0.55
CMTM3-212ENST00000566121 OSBPP22059 807 aa18.5■□□□□ 0.55
CMTM3-212ENST00000566121 GCLCP48506 637 aaPredicted RBP18.5■□□□□ 0.55
CMTM3-212ENST00000566121 FCGRTP55899 365 aa18.5■□□□□ 0.55
CMTM3-212ENST00000566121 SIRT2Q8IXJ6 389 aa18.5■□□□□ 0.55
CMTM3-212ENST00000566121 CLASRPQ8N2M8 674 aaKnown RBP18.5■□□□□ 0.55
CMTM3-212ENST00000566121 TGFBRAP1Q8WUH2 860 aa18.5■□□□□ 0.55
CMTM3-212ENST00000566121 EHD4Q9H223 541 aa18.5■□□□□ 0.55
CMTM3-212ENST00000566121 RCAN3Q9UKA8 241 aa18.5■□□□□ 0.55
CMTM3-212ENST00000566121 EXOC6BQ9Y2D4 811 aa18.5■□□□□ 0.55
CMTM3-212ENST00000566121 PTPRFP10586 1907 aa18.5■□□□□ 0.55
CMTM3-212ENST00000566121 CYP2C8P10632 490 aa18.49■□□□□ 0.55
CMTM3-212ENST00000566121 CYP7A1P22680 504 aa18.49■□□□□ 0.55
CMTM3-212ENST00000566121 HOXA7P31268 230 aaPredicted RBP18.49■□□□□ 0.55
CMTM3-212ENST00000566121 IRF5Q13568 498 aa18.49■□□□□ 0.55
CMTM3-212ENST00000566121 RRP1BQ14684 758 aaKnown RBP18.49■□□□□ 0.55
CMTM3-212ENST00000566121 AACSQ86V21 672 aa18.49■□□□□ 0.55
CMTM3-212ENST00000566121 TRIM75PA6NK02 468 aa18.48■□□□□ 0.55
CMTM3-212ENST00000566121 C19orf81C9J6K1 198 aa18.48■□□□□ 0.55
CMTM3-212ENST00000566121 FMNL1O95466 1100 aaPredicted RBP18.48■□□□□ 0.55
CMTM3-212ENST00000566121 SLURP2P0DP57 97 aa18.48■□□□□ 0.55
CMTM3-212ENST00000566121 SPP2Q13103 211 aa18.48■□□□□ 0.55
CMTM3-212ENST00000566121 FAM110CQ1W6H9 321 aa18.48■□□□□ 0.55
CMTM3-212ENST00000566121 PXYLP1Q8TE99 480 aa18.48■□□□□ 0.55
CMTM3-212ENST00000566121 FOCADQ5VW36 1801 aa18.47■□□□□ 0.55
CMTM3-212ENST00000566121 SLC34A2O95436 690 aa18.47■□□□□ 0.55
CMTM3-212ENST00000566121 HLA-DOAP06340 250 aa18.47■□□□□ 0.55
CMTM3-212ENST00000566121 BACE1P56817 501 aa18.47■□□□□ 0.55
CMTM3-212ENST00000566121 TATDN1Q6P1N9 297 aa18.47■□□□□ 0.55
CMTM3-212ENST00000566121 GADL1Q6ZQY3 521 aa18.47■□□□□ 0.55
CMTM3-212ENST00000566121 DNAJC18Q9H819 358 aa18.47■□□□□ 0.55
CMTM3-212ENST00000566121 IDH1O75874 414 aaKnown RBP18.46■□□□□ 0.55
CMTM3-212ENST00000566121 GRK4P32298 578 aa18.46■□□□□ 0.55
CMTM3-212ENST00000566121 MAPKAPK5Q8IW41 473 aa18.46■□□□□ 0.55
CMTM3-212ENST00000566121 SLAIN1Q8ND83 568 aa18.46■□□□□ 0.55
CMTM3-212ENST00000566121 NKX2-3Q8TAU0 364 aa18.46■□□□□ 0.55
CMTM3-212ENST00000566121 RIOK1Q9BRS2 568 aaKnown RBP18.46■□□□□ 0.55
CMTM3-212ENST00000566121 COG6Q9Y2V7 657 aa18.46■□□□□ 0.55
CMTM3-212ENST00000566121 MYPNQ86TC9 1320 aa18.46■□□□□ 0.55
CMTM3-212ENST00000566121 CEP290O15078 2479 aa18.45■□□□□ 0.54
CMTM3-212ENST00000566121 EN2P19622 333 aaPredicted RBP18.45■□□□□ 0.54
CMTM3-212ENST00000566121 TREML2Q5T2D2 321 aa18.45■□□□□ 0.54
CMTM3-212ENST00000566121 TTC6Q86TZ1 520 aa18.45■□□□□ 0.54
CMTM3-212ENST00000566121 MAGEB6Q8N7X4 407 aa18.45■□□□□ 0.54
CMTM3-212ENST00000566121 RAET1EQ8TD07 263 aa18.45■□□□□ 0.54
CMTM3-212ENST00000566121 SMCR8Q8TEV9 937 aaPredicted RBP18.45■□□□□ 0.54
CMTM3-212ENST00000566121 ANTXR1Q9H6X2 564 aa18.45■□□□□ 0.54
CMTM3-212ENST00000566121 MORF4L1Q9UBU8 362 aa18.45■□□□□ 0.54
CMTM3-212ENST00000566121 PALD1Q9ULE6 856 aa18.45■□□□□ 0.54
CMTM3-212ENST00000566121 FAM196BA6NMK8 535 aa18.44■□□□□ 0.54
CMTM3-212ENST00000566121 GJB1P08034 283 aa18.44■□□□□ 0.54
CMTM3-212ENST00000566121 ATP5JP18859 108 aa18.44■□□□□ 0.54
CMTM3-212ENST00000566121 DYNLL1P63167 89 aaKnown RBP18.44■□□□□ 0.54
CMTM3-212ENST00000566121 GTF3C2Q8WUA4 911 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-212ENST00000566121 SERPINB13Q9UIV8 391 aa18.44■□□□□ 0.54
CMTM3-212ENST00000566121 SIPA1L1O43166 1804 aa18.44■□□□□ 0.54
CMTM3-212ENST00000566121 LOC285556D6RIA3 1793 aa18.43■□□□□ 0.54
CMTM3-212ENST00000566121 USP17L10C9JJH3 530 aa18.43■□□□□ 0.54
CMTM3-212ENST00000566121 IFIT2P09913 472 aaKnown RBP18.43■□□□□ 0.54
CMTM3-212ENST00000566121 HMGCS2P54868 508 aa18.43■□□□□ 0.54
CMTM3-212ENST00000566121 SLC4A8Q2Y0W8 1093 aa18.43■□□□□ 0.54
CMTM3-212ENST00000566121 CRACR2BQ8N4Y2 399 aaPredicted RBP18.43■□□□□ 0.54
CMTM3-212ENST00000566121 SH3TC2Q8TF17 1288 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms