RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.86■□□□□ 0.13
RNF40-208ENST00000565995 SIL1Q9H173 461 aa15.86■□□□□ 0.13
RNF40-208ENST00000565995 MROH7-TTC4A0A0A0MT08 1334 aa15.86■□□□□ 0.13
RNF40-208ENST00000565995 RPTORQ8N122 1335 aa15.86■□□□□ 0.13
RNF40-208ENST00000565995 MAST2Q6P0Q8 1798 aa15.85■□□□□ 0.13
RNF40-208ENST00000565995 TRIM75PA6NK02 468 aa15.85■□□□□ 0.13
RNF40-208ENST00000565995 HMGCRP04035 888 aa15.85■□□□□ 0.13
RNF40-208ENST00000565995 MNX1P50219 401 aaPredicted RBP15.85■□□□□ 0.13
RNF40-208ENST00000565995 RASGRF1Q13972 1273 aa15.85■□□□□ 0.13
RNF40-208ENST00000565995 SH3D19Q5HYK7 790 aa15.85■□□□□ 0.13
RNF40-208ENST00000565995 ZNF384Q8TF68 577 aa15.85■□□□□ 0.13
RNF40-208ENST00000565995 LRCH3Q96II8 777 aa15.85■□□□□ 0.13
RNF40-208ENST00000565995 E9PSI1 815 aa15.84■□□□□ 0.13
RNF40-208ENST00000565995 UBTFL1P0CB47 393 aaPredicted RBP15.84■□□□□ 0.13
RNF40-208ENST00000565995 ADORA1P30542 326 aa15.84■□□□□ 0.13
RNF40-208ENST00000565995 BTDP43251 543 aa15.84■□□□□ 0.13
RNF40-208ENST00000565995 LRIT3Q3SXY7 679 aa15.84■□□□□ 0.13
RNF40-208ENST00000565995 DZIP1Q86YF9 867 aaKnown RBP15.84■□□□□ 0.13
RNF40-208ENST00000565995 FAM9BQ8IZU0 186 aa15.84■□□□□ 0.13
RNF40-208ENST00000565995 ZNF280CQ8ND82 737 aa15.84■□□□□ 0.13
RNF40-208ENST00000565995 DIS3LQ8TF46 1054 aaKnown RBP15.84■□□□□ 0.13
RNF40-208ENST00000565995 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.84■□□□□ 0.13
RNF40-208ENST00000565995 HDAC5Q9UQL6 1122 aa15.84■□□□□ 0.13
RNF40-208ENST00000565995 TIMM10P62072 90 aa15.83■□□□□ 0.12
RNF40-208ENST00000565995 MECOMQ03112 1051 aa15.83■□□□□ 0.12
RNF40-208ENST00000565995 SLFN5Q08AF3 891 aa15.83■□□□□ 0.12
RNF40-208ENST00000565995 PABPC4Q13310 644 aaKnown RBP eCLIP15.83■□□□□ 0.12
RNF40-208ENST00000565995 HMX1Q9NP08 348 aaPredicted RBP15.83■□□□□ 0.12
RNF40-208ENST00000565995 MORF4L1Q9UBU8 362 aa15.83■□□□□ 0.12
RNF40-208ENST00000565995 OGDHLQ9ULD0 1010 aa15.83■□□□□ 0.12
RNF40-208ENST00000565995 CAP2P40123 477 aa15.82■□□□□ 0.12
RNF40-208ENST00000565995 SPP2Q13103 211 aa15.82■□□□□ 0.12
RNF40-208ENST00000565995 PICALMQ13492 652 aa15.82■□□□□ 0.12
RNF40-208ENST00000565995 MAP3K21Q5TCX8 1036 aa15.82■□□□□ 0.12
RNF40-208ENST00000565995 ERICH6Q7L0X2 663 aa15.82■□□□□ 0.12
RNF40-208ENST00000565995 CCDC84Q86UT8 332 aaPredicted RBP15.82■□□□□ 0.12
RNF40-208ENST00000565995 NBPF3Q9H094 633 aa15.82■□□□□ 0.12
RNF40-208ENST00000565995 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.82■□□□□ 0.12
RNF40-208ENST00000565995 ABCF2Q9UG63 623 aa15.82■□□□□ 0.12
RNF40-208ENST00000565995 PA2G4Q9UQ80 394 aaKnown RBP15.82■□□□□ 0.12
RNF40-208ENST00000565995 ZNFX1Q9P2E3 1918 aaKnown RBP15.82■□□□□ 0.12
RNF40-208ENST00000565995 LDHCP07864 332 aa15.81■□□□□ 0.12
RNF40-208ENST00000565995 XRCC5P13010 732 aaKnown RBP15.81■□□□□ 0.12
RNF40-208ENST00000565995 HOXA7P31268 230 aaPredicted RBP15.81■□□□□ 0.12
RNF40-208ENST00000565995 RLFQ13129 1914 aa15.81■□□□□ 0.12
RNF40-208ENST00000565995 TRMT2AQ8IZ69 625 aaKnown RBP15.81■□□□□ 0.12
RNF40-208ENST00000565995 NSUN4Q96CB9 384 aaKnown RBP15.81■□□□□ 0.12
RNF40-208ENST00000565995 XAGE2Q96GT9 111 aa15.81■□□□□ 0.12
RNF40-208ENST00000565995 WDR18Q9BV38 432 aa15.81■□□□□ 0.12
RNF40-208ENST00000565995 ASCC2Q9H1I8 757 aaPredicted RBP15.81■□□□□ 0.12
RNF40-208ENST00000565995 AKAP2Q9Y2D5 859 aa15.81■□□□□ 0.12
RNF40-208ENST00000565995 A0A1B0GUL7 405 aa15.8■□□□□ 0.12
RNF40-208ENST00000565995 USP17L5A8MUK1 530 aa15.8■□□□□ 0.12
RNF40-208ENST00000565995 HMGCS2P54868 508 aa15.8■□□□□ 0.12
RNF40-208ENST00000565995 RRP1BQ14684 758 aaKnown RBP15.8■□□□□ 0.12
RNF40-208ENST00000565995 HERC5Q9UII4 1024 aaKnown RBP15.8■□□□□ 0.12
RNF40-208ENST00000565995 CT47B1P0C2W7 299 aaPredicted RBP15.79■□□□□ 0.12
RNF40-208ENST00000565995 GSTO1P78417 241 aa15.79■□□□□ 0.12
RNF40-208ENST00000565995 TRIM32Q13049 653 aa15.79■□□□□ 0.12
RNF40-208ENST00000565995 MTX1Q13505 466 aa15.79■□□□□ 0.12
RNF40-208ENST00000565995 MVPQ14764 893 aaKnown RBP15.79■□□□□ 0.12
RNF40-208ENST00000565995 METTL16Q86W50 562 aaKnown RBP15.79■□□□□ 0.12
RNF40-208ENST00000565995 C7orf61Q8IZ16 206 aa15.79■□□□□ 0.12
RNF40-208ENST00000565995 C11orf49Q9H6J7 331 aa15.79■□□□□ 0.12
RNF40-208ENST00000565995 HMG20BQ9P0W2 317 aa15.79■□□□□ 0.12
RNF40-208ENST00000565995 TAOK2Q9UL54 1235 aa15.79■□□□□ 0.12
RNF40-208ENST00000565995 STXBP5LQ9Y2K9 1186 aa15.79■□□□□ 0.12
RNF40-208ENST00000565995 LTBP2Q14767 1821 aa15.78■□□□□ 0.12
RNF40-208ENST00000565995 FAM196BA6NMK8 535 aa15.78■□□□□ 0.12
RNF40-208ENST00000565995 COL6A1P12109 1028 aa15.78■□□□□ 0.12
RNF40-208ENST00000565995 TRMT44Q8IYL2 757 aaKnown RBP15.78■□□□□ 0.12
RNF40-208ENST00000565995 TDHQ8IZJ6 230 aa15.78■□□□□ 0.12
RNF40-208ENST00000565995 TRIB2Q92519 343 aa15.78■□□□□ 0.12
RNF40-208ENST00000565995 USP6NLQ92738 828 aa15.78■□□□□ 0.12
RNF40-208ENST00000565995 AS3MTQ9HBK9 375 aa15.78■□□□□ 0.12
RNF40-208ENST00000565995 PFASO15067 1338 aa15.77■□□□□ 0.12
RNF40-208ENST00000565995 ARID4AP29374 1257 aaPredicted RBP15.77■□□□□ 0.12
RNF40-208ENST00000565995 MAGEA10P43363 369 aaPredicted RBP15.77■□□□□ 0.12
RNF40-208ENST00000565995 BACE1P56817 501 aa15.77■□□□□ 0.12
RNF40-208ENST00000565995 TFCP2Q12800 502 aa15.77■□□□□ 0.12
RNF40-208ENST00000565995 DEFB123Q8N688 67 aa15.77■□□□□ 0.12
RNF40-208ENST00000565995 SPATA5Q8NB90 893 aa15.77■□□□□ 0.12
RNF40-208ENST00000565995 DHX36Q9H2U1 1008 aaKnown RBP15.77■□□□□ 0.12
RNF40-208ENST00000565995 SMC4Q9NTJ3 1288 aa15.77■□□□□ 0.12
RNF40-208ENST00000565995 GINM1Q9NU53 330 aa15.77■□□□□ 0.12
RNF40-208ENST00000565995 MTMR10Q9NXD2 777 aa15.77■□□□□ 0.12
RNF40-208ENST00000565995 PI4KBQ9UBF8 816 aa15.77■□□□□ 0.12
RNF40-208ENST00000565995 NOB1Q9ULX3 412 aaKnown RBP15.77■□□□□ 0.12
RNF40-208ENST00000565995 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.77■□□□□ 0.12
RNF40-208ENST00000565995 C19orf81C9J6K1 198 aa15.76■□□□□ 0.11
RNF40-208ENST00000565995 P2RX7Q99572 595 aaKnown RBP15.76■□□□□ 0.11
RNF40-208ENST00000565995 MEIS3Q99687 375 aa15.76■□□□□ 0.11
RNF40-208ENST00000565995 API5Q9BZZ5 524 aaKnown RBP15.76■□□□□ 0.11
RNF40-208ENST00000565995 ZMYND8Q9ULU4 1186 aaPredicted RBP15.76■□□□□ 0.11
RNF40-208ENST00000565995 EYSQ5T1H1 3165 aa15.76■□□□□ 0.11
RNF40-208ENST00000565995 MYH8P13535 1937 aa15.75■□□□□ 0.11
RNF40-208ENST00000565995 IGSF3O75054 1194 aa15.75■□□□□ 0.11
RNF40-208ENST00000565995 ASNSP08243 561 aa15.75■□□□□ 0.11
RNF40-208ENST00000565995 PPP4CP60510 307 aa15.75■□□□□ 0.11
RNF40-208ENST00000565995 LHX8Q68G74 356 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms