RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 MAP2K1Q02750 393 aaPredicted RBP10.32□□□□□ -0.76
UBR1-204ENST00000563239 NOL9Q5SY16 702 aaKnown RBP10.32□□□□□ -0.76
UBR1-204ENST00000563239 ZSCAN25Q6NSZ9 544 aa10.32□□□□□ -0.76
UBR1-204ENST00000563239 SDR42E1Q8WUS8 393 aa10.32□□□□□ -0.76
UBR1-204ENST00000563239 OPTNQ96CV9 577 aa10.32□□□□□ -0.76
UBR1-204ENST00000563239 DHX36Q9H2U1 1008 aaKnown RBP10.32□□□□□ -0.76
UBR1-204ENST00000563239 DCP1AQ9NPI6 582 aaPredicted RBP10.32□□□□□ -0.76
UBR1-204ENST00000563239 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.32□□□□□ -0.76
UBR1-204ENST00000563239 LAMB1P07942 1786 aa10.31□□□□□ -0.76
UBR1-204ENST00000563239 M0R2C6 588 aa10.31□□□□□ -0.76
UBR1-204ENST00000563239 ZBTB48P10074 688 aaPredicted RBP10.31□□□□□ -0.76
UBR1-204ENST00000563239 USP5P45974 858 aa10.31□□□□□ -0.76
UBR1-204ENST00000563239 JAG1P78504 1218 aa10.31□□□□□ -0.76
UBR1-204ENST00000563239 SLC4A8Q2Y0W8 1093 aa10.31□□□□□ -0.76
UBR1-204ENST00000563239 APPBP2Q92624 585 aa10.31□□□□□ -0.76
UBR1-204ENST00000563239 EVI5LQ96CN4 794 aa10.31□□□□□ -0.76
UBR1-204ENST00000563239 MS4A4AQ96JQ5 239 aa10.31□□□□□ -0.76
UBR1-204ENST00000563239 STRBPQ96SI9 672 aaKnown RBP10.31□□□□□ -0.76
UBR1-204ENST00000563239 SEC62Q99442 399 aaKnown RBP10.31□□□□□ -0.76
UBR1-204ENST00000563239 CRNKL1Q9BZJ0 848 aaKnown RBP10.31□□□□□ -0.76
UBR1-204ENST00000563239 PI4KBQ9UBF8 816 aa10.31□□□□□ -0.76
UBR1-204ENST00000563239 CSADQ9Y600 493 aa10.31□□□□□ -0.76
UBR1-204ENST00000563239 AK9Q5TCS8 1911 aa10.31□□□□□ -0.76
UBR1-204ENST00000563239 TESPA1A2RU30 521 aaPredicted RBP10.3□□□□□ -0.76
UBR1-204ENST00000563239 SMIM22K7EJ46 135 aa10.3□□□□□ -0.76
UBR1-204ENST00000563239 ZFYP08048 801 aaPredicted RBP10.3□□□□□ -0.76
UBR1-204ENST00000563239 CYP2D6P10635 497 aa10.3□□□□□ -0.76
UBR1-204ENST00000563239 PLCD1P51178 756 aa10.3□□□□□ -0.76
UBR1-204ENST00000563239 SHROOM1Q2M3G4 852 aaPredicted RBP10.3□□□□□ -0.76
UBR1-204ENST00000563239 ZMYM1Q5SVZ6 1142 aa10.3□□□□□ -0.76
UBR1-204ENST00000563239 ERO1BQ86YB8 467 aa10.3□□□□□ -0.76
UBR1-204ENST00000563239 FOXP4Q8IVH2 680 aaPredicted RBP10.3□□□□□ -0.76
UBR1-204ENST00000563239 SCYL3Q8IZE3 742 aa10.3□□□□□ -0.76
UBR1-204ENST00000563239 OTUD5Q96G74 571 aa10.3□□□□□ -0.76
UBR1-204ENST00000563239 PTPN18Q99952 460 aa10.3□□□□□ -0.76
UBR1-204ENST00000563239 FSD1Q9BTV5 496 aa10.3□□□□□ -0.76
UBR1-204ENST00000563239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.3□□□□□ -0.76
UBR1-204ENST00000563239 RNF186Q9NXI6 227 aa10.3□□□□□ -0.76
UBR1-204ENST00000563239 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.3□□□□□ -0.76
UBR1-204ENST00000563239 HERC5Q9UII4 1024 aaKnown RBP10.3□□□□□ -0.76
UBR1-204ENST00000563239 GSG1L2A8MUP6 293 aa10.29□□□□□ -0.76
UBR1-204ENST00000563239 IGF2BP3O00425 579 aaKnown RBP eCLIP10.29□□□□□ -0.76
UBR1-204ENST00000563239 IRF6O14896 467 aa10.29□□□□□ -0.76
UBR1-204ENST00000563239 FOXP2O15409 715 aa10.29□□□□□ -0.76
UBR1-204ENST00000563239 CTNND1O60716 968 aaKnown RBP10.29□□□□□ -0.76
UBR1-204ENST00000563239 HSPA8P11142 646 aaKnown RBP10.29□□□□□ -0.76
UBR1-204ENST00000563239 PTPRAP18433 802 aa10.29□□□□□ -0.76
UBR1-204ENST00000563239 GABPAQ06546 454 aa10.29□□□□□ -0.76
UBR1-204ENST00000563239 PPIL2Q13356 520 aa10.29□□□□□ -0.76
UBR1-204ENST00000563239 MOGSQ13724 837 aa10.29□□□□□ -0.76
UBR1-204ENST00000563239 REM2Q8IYK8 340 aaPredicted RBP10.29□□□□□ -0.76
UBR1-204ENST00000563239 AIDAQ96BJ3 306 aa10.29□□□□□ -0.76
UBR1-204ENST00000563239 EHD4Q9H223 541 aa10.29□□□□□ -0.76
UBR1-204ENST00000563239 ATP8A2Q9NTI2 1148 aa10.29□□□□□ -0.76
UBR1-204ENST00000563239 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
UBR1-204ENST00000563239 U3KPZ7 1027 aaPredicted RBP10.29□□□□□ -0.76
UBR1-204ENST00000563239 NAV1Q8NEY1 1877 aa10.29□□□□□ -0.76
UBR1-204ENST00000563239 MYH1P12882 1939 aa10.29□□□□□ -0.76
UBR1-204ENST00000563239 CYP2D7A0A087X1C5 515 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 MANSC4A6NHS7 340 aaPredicted RBP10.28□□□□□ -0.76
UBR1-204ENST00000563239 GPAA1O43292 621 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 HLA-DOAP06340 250 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 GSPT1P15170 499 aaKnown RBP10.28□□□□□ -0.76
UBR1-204ENST00000563239 CAP2P40123 477 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 PPATQ06203 517 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 TATDN1Q6P1N9 297 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 CCDC129Q6ZRS4 1044 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 CCDC84Q86UT8 332 aaPredicted RBP10.28□□□□□ -0.76
UBR1-204ENST00000563239 SKAP1Q86WV1 359 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 IFNL1Q8IU54 200 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 BRI3BPQ8WY22 251 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 FAM227BQ96M60 508 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 R3HDMLQ9H3Y0 253 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 EPB41L4AQ9HCS5 686 aaPredicted RBP10.28□□□□□ -0.76
UBR1-204ENST00000563239 MCM9Q9NXL9 1143 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 KCNH4Q9UQ05 1017 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 AFG3L2Q9Y4W6 797 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 SLC4A4Q9Y6R1 1079 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 PHIPQ8WWQ0 1821 aa10.28□□□□□ -0.76
UBR1-204ENST00000563239 DOCK1Q14185 1865 aa10.27□□□□□ -0.76
UBR1-204ENST00000563239 A0A0D9SFI3 127 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 TRIM6-TRIM34B2RNG4 842 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 USP17L12C9JPN9 530 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 USP17L21D6R901 530 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 TRPA1O75762 1119 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 POLR3DP05423 398 aaPredicted RBP10.27□□□□□ -0.77
UBR1-204ENST00000563239 SHMT1P34896 483 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 CTCFP49711 727 aaPredicted RBP10.27□□□□□ -0.77
UBR1-204ENST00000563239 GTF2A2P52657 109 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 INHBEP58166 350 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 SREBF2Q12772 1141 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 LRRFIP1Q32MZ4 808 aaKnown RBP10.27□□□□□ -0.77
UBR1-204ENST00000563239 TTC22Q5TAA0 569 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 C12orf60Q5U649 245 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 CTR9Q6PD62 1173 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 TTC6Q86TZ1 520 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 TICAM2Q86XR7 235 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 DYNLL2Q96FJ2 89 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 SAGE1Q9NXZ1 904 aa10.27□□□□□ -0.77
UBR1-204ENST00000563239 SERPINB13Q9UIV8 391 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms