RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 TNPO2O14787 897 aaKnown RBP22.68■■□□□ 1.22
TPM1-224ENST00000560615 CAPN2P17655 700 aa22.68■■□□□ 1.22
TPM1-224ENST00000560615 CTGFP29279 349 aa22.68■■□□□ 1.22
TPM1-224ENST00000560615 CAP2P40123 477 aa22.68■■□□□ 1.22
TPM1-224ENST00000560615 ZNF280CQ8ND82 737 aa22.68■■□□□ 1.22
TPM1-224ENST00000560615 DOCK2Q92608 1830 aa22.68■■□□□ 1.22
TPM1-224ENST00000560615 USP17L5A8MUK1 530 aa22.67■■□□□ 1.22
TPM1-224ENST00000560615 PRKCZQ05513 592 aa22.67■■□□□ 1.22
TPM1-224ENST00000560615 SPP2Q13103 211 aa22.67■■□□□ 1.22
TPM1-224ENST00000560615 CERS3Q8IU89 383 aa22.67■■□□□ 1.22
TPM1-224ENST00000560615 COA7Q96BR5 231 aa22.67■■□□□ 1.22
TPM1-224ENST00000560615 DBNDD2Q9BQY9 259 aa22.67■■□□□ 1.22
TPM1-224ENST00000560615 RNF208Q9H0X6 261 aa22.67■■□□□ 1.22
TPM1-224ENST00000560615 SNRKQ9NRH2 765 aa22.67■■□□□ 1.22
TPM1-224ENST00000560615 AATFQ9NY61 560 aaKnown RBP eCLIP22.67■■□□□ 1.22
TPM1-224ENST00000560615 GJB1P08034 283 aa22.66■■□□□ 1.22
TPM1-224ENST00000560615 GCLCP48506 637 aaPredicted RBP22.66■■□□□ 1.22
TPM1-224ENST00000560615 PPP4CP60510 307 aa22.66■■□□□ 1.22
TPM1-224ENST00000560615 FOXP4Q8IVH2 680 aaPredicted RBP22.66■■□□□ 1.22
TPM1-224ENST00000560615 SH3RF3Q8TEJ3 882 aaPredicted RBP22.66■■□□□ 1.22
TPM1-224ENST00000560615 NOP58Q9Y2X3 529 aaKnown RBP22.66■■□□□ 1.22
TPM1-224ENST00000560615 CCL5P13501 91 aa22.65■■□□□ 1.22
TPM1-224ENST00000560615 MTFR1Q15390 333 aa22.65■■□□□ 1.22
TPM1-224ENST00000560615 CRACR2BQ8N4Y2 399 aaPredicted RBP22.65■■□□□ 1.22
TPM1-224ENST00000560615 GINM1Q9NU53 330 aa22.65■■□□□ 1.22
TPM1-224ENST00000560615 HTTP42858 3142 aa22.64■■□□□ 1.22
TPM1-224ENST00000560615 FAM196BA6NMK8 535 aa22.64■■□□□ 1.21
TPM1-224ENST00000560615 ZBTB7BO15156 539 aaPredicted RBP22.64■■□□□ 1.21
TPM1-224ENST00000560615 ADCY3O60266 1144 aa22.64■■□□□ 1.21
TPM1-224ENST00000560615 HLA-DOAP06340 250 aa22.64■■□□□ 1.21
TPM1-224ENST00000560615 ASNSP08243 561 aa22.64■■□□□ 1.21
TPM1-224ENST00000560615 GJA8P48165 433 aa22.64■■□□□ 1.21
TPM1-224ENST00000560615 FAM110CQ1W6H9 321 aa22.64■■□□□ 1.21
TPM1-224ENST00000560615 HABP4Q5JVS0 413 aaKnown RBP22.64■■□□□ 1.21
TPM1-224ENST00000560615 TMED8Q6PL24 325 aaPredicted RBP22.64■■□□□ 1.21
TPM1-224ENST00000560615 ERC1Q8IUD2 1116 aa22.64■■□□□ 1.21
TPM1-224ENST00000560615 PXYLP1Q8TE99 480 aa22.64■■□□□ 1.21
TPM1-224ENST00000560615 HTATIP2Q9BUP3 242 aa22.64■■□□□ 1.21
TPM1-224ENST00000560615 SLURP2P0DP57 97 aa22.63■■□□□ 1.21
TPM1-224ENST00000560615 MS4A1P11836 297 aa22.63■■□□□ 1.21
TPM1-224ENST00000560615 FLT3LGP49771 235 aa22.63■■□□□ 1.21
TPM1-224ENST00000560615 IRF5Q13568 498 aa22.63■■□□□ 1.21
TPM1-224ENST00000560615 ANKRD13CQ8N6S4 541 aa22.63■■□□□ 1.21
TPM1-224ENST00000560615 TGFBRAP1Q8WUH2 860 aa22.63■■□□□ 1.21
TPM1-224ENST00000560615 C1orf115Q9H7X2 142 aa22.63■■□□□ 1.21
TPM1-224ENST00000560615 TMOD4Q9NZQ9 345 aa22.63■■□□□ 1.21
TPM1-224ENST00000560615 KIAA0100Q14667 2235 aaKnown RBP22.63■■□□□ 1.21
TPM1-224ENST00000560615 CYP2E1P05181 493 aaPredicted RBP22.62■■□□□ 1.21
TPM1-224ENST00000560615 HSP90AB4PQ58FF6 505 aa22.62■■□□□ 1.21
TPM1-224ENST00000560615 CCDC84Q86UT8 332 aaPredicted RBP22.62■■□□□ 1.21
TPM1-224ENST00000560615 GABRQQ9UN88 632 aa22.62■■□□□ 1.21
TPM1-224ENST00000560615 ZAP70P43403 619 aa22.61■■□□□ 1.21
TPM1-224ENST00000560615 HMGCS2P54868 508 aa22.61■■□□□ 1.21
TPM1-224ENST00000560615 DOCK1Q14185 1865 aa22.61■■□□□ 1.21
TPM1-224ENST00000560615 SH3D19Q5HYK7 790 aa22.61■■□□□ 1.21
TPM1-224ENST00000560615 TREML2Q5T2D2 321 aa22.61■■□□□ 1.21
TPM1-224ENST00000560615 MAPKAPK5Q8IW41 473 aa22.61■■□□□ 1.21
TPM1-224ENST00000560615 DPF3Q92784 378 aa22.61■■□□□ 1.21
TPM1-224ENST00000560615 WDR18Q9BV38 432 aa22.61■■□□□ 1.21
TPM1-224ENST00000560615 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.61■■□□□ 1.21
TPM1-224ENST00000560615 C19orf81C9J6K1 198 aa22.6■■□□□ 1.21
TPM1-224ENST00000560615 CYP7A1P22680 504 aa22.6■■□□□ 1.21
TPM1-224ENST00000560615 CCDC8Q9H0W5 538 aaPredicted RBP22.6■■□□□ 1.21
TPM1-224ENST00000560615 TAOK2Q9UL54 1235 aa22.6■■□□□ 1.21
TPM1-224ENST00000560615 FLT1P17948 1338 aa22.59■■□□□ 1.21
TPM1-224ENST00000560615 IDH1O75874 414 aaKnown RBP22.59■■□□□ 1.21
TPM1-224ENST00000560615 IRX3P78415 501 aaPredicted RBP22.59■■□□□ 1.21
TPM1-224ENST00000560615 MAP3K12Q12852 859 aa22.59■■□□□ 1.21
TPM1-224ENST00000560615 U2AF1L4Q8WU68 220 aaKnown RBP22.59■■□□□ 1.21
TPM1-224ENST00000560615 DBNLQ9UJU6 430 aaKnown RBP22.59■■□□□ 1.21
TPM1-224ENST00000560615 BACE1P56817 501 aa22.58■■□□□ 1.21
TPM1-224ENST00000560615 DIEXFQ68CQ4 756 aaKnown RBP22.58■■□□□ 1.21
TPM1-224ENST00000560615 MIER1Q8N108 512 aa22.58■■□□□ 1.21
TPM1-224ENST00000560615 ZSWIM8A7E2V4 1837 aa22.57■■□□□ 1.2
TPM1-224ENST00000560615 USP17L10C9JJH3 530 aa22.57■■□□□ 1.2
TPM1-224ENST00000560615 SGPL1O95470 568 aa22.57■■□□□ 1.2
TPM1-224ENST00000560615 INHAP05111 366 aa22.57■■□□□ 1.2
TPM1-224ENST00000560615 USP5P45974 858 aa22.57■■□□□ 1.2
TPM1-224ENST00000560615 METTL16Q86W50 562 aaKnown RBP22.57■■□□□ 1.2
TPM1-224ENST00000560615 EAF2Q96CJ1 260 aaPredicted RBP22.57■■□□□ 1.2
TPM1-224ENST00000560615 SHISA4Q96DD7 197 aa22.57■■□□□ 1.2
TPM1-224ENST00000560615 ASCC2Q9H1I8 757 aaPredicted RBP22.57■■□□□ 1.2
TPM1-224ENST00000560615 PIH1D3Q9NQM4 214 aaKnown RBP22.57■■□□□ 1.2
TPM1-224ENST00000560615 PALD1Q9ULE6 856 aa22.57■■□□□ 1.2
TPM1-224ENST00000560615 NR2E3Q9Y5X4 410 aa22.57■■□□□ 1.2
TPM1-224ENST00000560615 TFRCP02786 760 aaKnown RBP22.56■■□□□ 1.2
TPM1-224ENST00000560615 MTMR2Q13614 643 aa22.56■■□□□ 1.2
TPM1-224ENST00000560615 CEP85Q6P2H3 762 aa22.56■■□□□ 1.2
TPM1-224ENST00000560615 UNC93B1Q9H1C4 597 aa22.56■■□□□ 1.2
TPM1-224ENST00000560615 ZBED9Q6R2W3 1325 aa22.56■■□□□ 1.2
TPM1-224ENST00000560615 FARP2O94887 1054 aaPredicted RBP22.55■■□□□ 1.2
TPM1-224ENST00000560615 RLBP1P12271 317 aa22.55■■□□□ 1.2
TPM1-224ENST00000560615 ELNP15502 786 aa22.55■■□□□ 1.2
TPM1-224ENST00000560615 HOXA7P31268 230 aaPredicted RBP22.55■■□□□ 1.2
TPM1-224ENST00000560615 RRP1BQ14684 758 aaKnown RBP22.55■■□□□ 1.2
TPM1-224ENST00000560615 TTF1Q15361 905 aaPredicted RBP22.55■■□□□ 1.2
TPM1-224ENST00000560615 ADGRA1Q86SQ6 560 aa22.55■■□□□ 1.2
TPM1-224ENST00000560615 TTC6Q86TZ1 520 aa22.55■■□□□ 1.2
TPM1-224ENST00000560615 AACSQ86V21 672 aa22.55■■□□□ 1.2
TPM1-224ENST00000560615 GTF3C2Q8WUA4 911 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms