RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 GNAT3A8MTJ3 354 aa6.67□□□□□ -1.34
LRRC28-218ENST00000560236 FANCGO15287 622 aa6.67□□□□□ -1.34
LRRC28-218ENST00000560236 PAGE1O75459 146 aa6.67□□□□□ -1.34
LRRC28-218ENST00000560236 ZP2Q05996 745 aa6.67□□□□□ -1.34
LRRC28-218ENST00000560236 ZBTB37Q5TC79 503 aa6.67□□□□□ -1.34
LRRC28-218ENST00000560236 LLGL2Q6P1M3 1020 aa6.67□□□□□ -1.34
LRRC28-218ENST00000560236 UBE3DQ7Z6J8 389 aa6.67□□□□□ -1.34
LRRC28-218ENST00000560236 SPACA3Q8IXA5 215 aa6.67□□□□□ -1.34
LRRC28-218ENST00000560236 FLAD1Q8NFF5 587 aa6.67□□□□□ -1.34
LRRC28-218ENST00000560236 SRCIN1Q9C0H9 1055 aa6.67□□□□□ -1.34
LRRC28-218ENST00000560236 PPM1HQ9ULR3 514 aa6.67□□□□□ -1.34
LRRC28-218ENST00000560236 GNEQ9Y223 722 aaKnown RBP6.67□□□□□ -1.34
LRRC28-218ENST00000560236 FBXO24O75426 580 aa6.66□□□□□ -1.34
LRRC28-218ENST00000560236 RING1Q06587 406 aa6.66□□□□□ -1.34
LRRC28-218ENST00000560236 LRRC14Q15048 493 aa6.66□□□□□ -1.34
LRRC28-218ENST00000560236 KCT2Q8NC54 265 aa6.66□□□□□ -1.34
LRRC28-218ENST00000560236 FBF1Q8TES7 1133 aa6.66□□□□□ -1.34
LRRC28-218ENST00000560236 SLC38A3Q99624 504 aa6.66□□□□□ -1.34
LRRC28-218ENST00000560236 PCDHA4Q9UN74 947 aa6.66□□□□□ -1.34
LRRC28-218ENST00000560236 MAPK8P45983 427 aa6.65□□□□□ -1.34
LRRC28-218ENST00000560236 CLCN7P51798 805 aa6.65□□□□□ -1.34
LRRC28-218ENST00000560236 NKPD1Q17RQ9 610 aa6.65□□□□□ -1.34
LRRC28-218ENST00000560236 ZSWIM9Q86XI8 627 aa6.65□□□□□ -1.34
LRRC28-218ENST00000560236 ELMO3Q96BJ8 720 aa6.65□□□□□ -1.34
LRRC28-218ENST00000560236 PRDM5Q9NQX1 630 aaPredicted RBP6.65□□□□□ -1.34
LRRC28-218ENST00000560236 ARID1BQ8NFD5 2236 aaPredicted RBP6.65□□□□□ -1.35
LRRC28-218ENST00000560236 LRRC10BA6NIK2 292 aa6.64□□□□□ -1.35
LRRC28-218ENST00000560236 EOMESO95936 686 aa6.64□□□□□ -1.35
LRRC28-218ENST00000560236 KCNMB1Q16558 191 aa6.64□□□□□ -1.35
LRRC28-218ENST00000560236 SCARA3Q6AZY7 606 aa6.64□□□□□ -1.35
LRRC28-218ENST00000560236 ARMCX6Q7L4S7 300 aa6.64□□□□□ -1.35
LRRC28-218ENST00000560236 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
LRRC28-218ENST00000560236 OSBPL7Q9BZF2 842 aa6.64□□□□□ -1.35
LRRC28-218ENST00000560236 MAPK8IP1Q9UQF2 711 aa6.64□□□□□ -1.35
LRRC28-218ENST00000560236 GIPC1O14908 333 aa6.63□□□□□ -1.35
LRRC28-218ENST00000560236 LRIG2O94898 1065 aa6.63□□□□□ -1.35
LRRC28-218ENST00000560236 BRD1O95696 1058 aa6.63□□□□□ -1.35
LRRC28-218ENST00000560236 RASIP1Q5U651 963 aa6.63□□□□□ -1.35
LRRC28-218ENST00000560236 ZSCAN29Q8IWY8 852 aaPredicted RBP6.63□□□□□ -1.35
LRRC28-218ENST00000560236 ZNF507Q8TCN5 953 aa6.63□□□□□ -1.35
LRRC28-218ENST00000560236 FAM84AQ96KN4 292 aa6.63□□□□□ -1.35
LRRC28-218ENST00000560236 PITPNM2Q9BZ72 1349 aa6.63□□□□□ -1.35
LRRC28-218ENST00000560236 FOXQ1Q9C009 403 aa6.63□□□□□ -1.35
LRRC28-218ENST00000560236 FAM53CQ9NYF3 392 aa6.63□□□□□ -1.35
LRRC28-218ENST00000560236 CYP8B1Q9UNU6 501 aa6.63□□□□□ -1.35
LRRC28-218ENST00000560236 CTNND2Q9UQB3 1225 aa6.63□□□□□ -1.35
LRRC28-218ENST00000560236 FAM155AB1AL88 458 aaPredicted RBP6.62□□□□□ -1.35
LRRC28-218ENST00000560236 FMR1Q06787 632 aaKnown RBP eCLIP6.62□□□□□ -1.35
LRRC28-218ENST00000560236 MESP2Q0VG99 397 aa6.62□□□□□ -1.35
LRRC28-218ENST00000560236 ALG1LQ6GMV1 187 aa6.62□□□□□ -1.35
LRRC28-218ENST00000560236 SETDB2Q96T68 719 aa6.62□□□□□ -1.35
LRRC28-218ENST00000560236 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.62□□□□□ -1.35
LRRC28-218ENST00000560236 LMCD1Q9NZU5 365 aa6.62□□□□□ -1.35
LRRC28-218ENST00000560236 PRAMEF27A3QJZ7 478 aa6.61□□□□□ -1.35
LRRC28-218ENST00000560236 ZNF503-AS2A6NEH8 195 aa6.61□□□□□ -1.35
LRRC28-218ENST00000560236 SUPT5HO00267 1087 aaKnown RBP6.61□□□□□ -1.35
LRRC28-218ENST00000560236 SLITRK5O94991 958 aa6.61□□□□□ -1.35
LRRC28-218ENST00000560236 CELA3AP09093 270 aa6.61□□□□□ -1.35
LRRC28-218ENST00000560236 AFMP43652 599 aa6.61□□□□□ -1.35
LRRC28-218ENST00000560236 INPP5AQ14642 412 aa6.61□□□□□ -1.35
LRRC28-218ENST00000560236 MLANAQ16655 118 aa6.61□□□□□ -1.35
LRRC28-218ENST00000560236 PCNX4Q63HM2 1172 aa6.61□□□□□ -1.35
LRRC28-218ENST00000560236 ANKRD24Q8TF21 1146 aa6.61□□□□□ -1.35
LRRC28-218ENST00000560236 TPX2Q9ULW0 747 aaKnown RBP6.61□□□□□ -1.35
LRRC28-218ENST00000560236 SPG7Q9UQ90 795 aa6.61□□□□□ -1.35
LRRC28-218ENST00000560236 RB1CC1Q8TDY2 1594 aa6.61□□□□□ -1.35
LRRC28-218ENST00000560236 ATP2B2Q01814 1243 aa6.6□□□□□ -1.35
LRRC28-218ENST00000560236 LRFN4Q6PJG9 635 aa6.6□□□□□ -1.35
LRRC28-218ENST00000560236 HDXQ7Z353 690 aa6.6□□□□□ -1.35
LRRC28-218ENST00000560236 HSPA12BQ96MM6 686 aa6.6□□□□□ -1.35
LRRC28-218ENST00000560236 CARS2Q9HA77 564 aaKnown RBP6.6□□□□□ -1.35
LRRC28-218ENST00000560236 WWC3Q9ULE0 1092 aa6.6□□□□□ -1.35
LRRC28-218ENST00000560236 PTPN11Q06124 597 aaPredicted RBP6.59□□□□□ -1.35
LRRC28-218ENST00000560236 SFRP5Q5T4F7 317 aa6.59□□□□□ -1.35
LRRC28-218ENST00000560236 CDKAL1Q5VV42 579 aa6.59□□□□□ -1.35
LRRC28-218ENST00000560236 FYB2Q5VWT5 728 aa6.59□□□□□ -1.35
LRRC28-218ENST00000560236 CYFIP1Q7L576 1253 aa6.59□□□□□ -1.35
LRRC28-218ENST00000560236 MFSD4AQ8N468 514 aa6.59□□□□□ -1.35
LRRC28-218ENST00000560236 BHLHE22Q8NFJ8 381 aaPredicted RBP6.59□□□□□ -1.35
LRRC28-218ENST00000560236 PLPPR2Q96GM1 343 aa6.59□□□□□ -1.35
LRRC28-218ENST00000560236 LIN37Q96GY3 246 aaPredicted RBP6.59□□□□□ -1.35
LRRC28-218ENST00000560236 MIPEPQ99797 713 aa6.59□□□□□ -1.35
LRRC28-218ENST00000560236 C12orf49Q9H741 205 aa6.59□□□□□ -1.35
LRRC28-218ENST00000560236 FBRSQ9HAH7 460 aa6.59□□□□□ -1.35
LRRC28-218ENST00000560236 ATP13A1Q9HD20 1204 aa6.59□□□□□ -1.35
LRRC28-218ENST00000560236 FAM8A1Q9UBU6 413 aa6.59□□□□□ -1.35
LRRC28-218ENST00000560236 PRR33A8MZF0 331 aa6.58□□□□□ -1.36
LRRC28-218ENST00000560236 USP17L7P0C7H9 530 aa6.58□□□□□ -1.36
LRRC28-218ENST00000560236 ETF1P62495 437 aaKnown RBP6.58□□□□□ -1.36
LRRC28-218ENST00000560236 SLBPQ14493 270 aaKnown RBP eCLIP6.58□□□□□ -1.36
LRRC28-218ENST00000560236 SPOCD1Q6ZMY3 1216 aa6.58□□□□□ -1.36
LRRC28-218ENST00000560236 KIRREL1Q96J84 757 aa6.58□□□□□ -1.36
LRRC28-218ENST00000560236 ASB16Q96NS5 453 aa6.58□□□□□ -1.36
LRRC28-218ENST00000560236 WNT10AQ9GZT5 417 aa6.58□□□□□ -1.36
LRRC28-218ENST00000560236 CNTNAP4Q9C0A0 1308 aa6.57□□□□□ -1.36
LRRC28-218ENST00000560236 GLI1P08151 1106 aa6.57□□□□□ -1.36
LRRC28-218ENST00000560236 ZNF865P0CJ78 1059 aaPredicted RBP6.57□□□□□ -1.36
LRRC28-218ENST00000560236 FGD1P98174 961 aa6.57□□□□□ -1.36
LRRC28-218ENST00000560236 NKG7Q16617 165 aa6.57□□□□□ -1.36
LRRC28-218ENST00000560236 FBLN7Q53RD9 439 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms