RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CCDC9Q9Y3X0 531 aaKnown RBP5.8□□□□□ -1.48
SPG11-206ENST00000558093 MINDY4BA8MYZ0 360 aa5.79□□□□□ -1.48
SPG11-206ENST00000558093 HYAL3O43820 417 aaPredicted RBP5.79□□□□□ -1.48
SPG11-206ENST00000558093 FOSL1P15407 271 aa5.79□□□□□ -1.48
SPG11-206ENST00000558093 CDK8P49336 464 aa5.79□□□□□ -1.48
SPG11-206ENST00000558093 OGFOD3Q6PK18 319 aa5.79□□□□□ -1.48
SPG11-206ENST00000558093 HS2ST1Q7LGA3 356 aa5.79□□□□□ -1.48
SPG11-206ENST00000558093 TMEM87AQ8NBN3 555 aa5.79□□□□□ -1.48
SPG11-206ENST00000558093 TMEM74Q96NL1 305 aa5.79□□□□□ -1.48
SPG11-206ENST00000558093 GGT7Q9UJ14 662 aa5.79□□□□□ -1.48
SPG11-206ENST00000558093 RBM47A0AV96 593 aaKnown RBP5.78□□□□□ -1.48
SPG11-206ENST00000558093 PF4P02776 101 aa5.78□□□□□ -1.48
SPG11-206ENST00000558093 GRK4P32298 578 aa5.78□□□□□ -1.48
SPG11-206ENST00000558093 NTF4P34130 210 aa5.78□□□□□ -1.48
SPG11-206ENST00000558093 RPL6Q02878 288 aaKnown RBP5.78□□□□□ -1.48
SPG11-206ENST00000558093 LMNB2Q03252 620 aa5.78□□□□□ -1.48
SPG11-206ENST00000558093 FAM160A1Q05DH4 1040 aa5.78□□□□□ -1.48
SPG11-206ENST00000558093 RING1Q06587 406 aa5.78□□□□□ -1.48
SPG11-206ENST00000558093 PDE4BQ07343 736 aa5.78□□□□□ -1.48
SPG11-206ENST00000558093 CAMK2GQ13555 558 aaPredicted RBP5.78□□□□□ -1.48
SPG11-206ENST00000558093 CYFIP1Q7L576 1253 aa5.78□□□□□ -1.48
SPG11-206ENST00000558093 RSRP1Q9BUV0 290 aa5.78□□□□□ -1.48
SPG11-206ENST00000558093 WNT10AQ9GZT5 417 aa5.78□□□□□ -1.48
SPG11-206ENST00000558093 KBTBD4Q9NVX7 518 aa5.78□□□□□ -1.48
SPG11-206ENST00000558093 ANGEL1Q9UNK9 670 aaKnown RBP5.78□□□□□ -1.48
SPG11-206ENST00000558093 LRIG2O94898 1065 aa5.77□□□□□ -1.49
SPG11-206ENST00000558093 PGRP06401 933 aa5.77□□□□□ -1.49
SPG11-206ENST00000558093 HOXA10P31260 410 aaPredicted RBP5.77□□□□□ -1.49
SPG11-206ENST00000558093 BNC2Q6ZN30 1099 aaPredicted RBP5.77□□□□□ -1.49
SPG11-206ENST00000558093 ARMCX6Q7L4S7 300 aa5.77□□□□□ -1.49
SPG11-206ENST00000558093 UBE3DQ7Z6J8 389 aa5.77□□□□□ -1.49
SPG11-206ENST00000558093 CCDC84Q86UT8 332 aaPredicted RBP5.77□□□□□ -1.49
SPG11-206ENST00000558093 HID1Q8IV36 788 aa5.77□□□□□ -1.49
SPG11-206ENST00000558093 RHOVQ96L33 236 aa5.77□□□□□ -1.49
SPG11-206ENST00000558093 DUSP23Q9BVJ7 150 aa5.77□□□□□ -1.49
SPG11-206ENST00000558093 PRDM10Q9NQV6 1147 aa5.77□□□□□ -1.49
SPG11-206ENST00000558093 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
SPG11-206ENST00000558093 KIAA1324LA8MWY0 1029 aaPredicted RBP5.76□□□□□ -1.49
SPG11-206ENST00000558093 LEFTY1O75610 366 aa5.76□□□□□ -1.49
SPG11-206ENST00000558093 MED26O95402 600 aa5.76□□□□□ -1.49
SPG11-206ENST00000558093 F13A1P00488 732 aa5.76□□□□□ -1.49
SPG11-206ENST00000558093 GOLM1Q8NBJ4 401 aa5.76□□□□□ -1.49
SPG11-206ENST00000558093 MIPEPQ99797 713 aa5.76□□□□□ -1.49
SPG11-206ENST00000558093 KRTAP4-6Q9BYQ5 205 aa5.76□□□□□ -1.49
SPG11-206ENST00000558093 FBRSQ9HAH7 460 aa5.76□□□□□ -1.49
SPG11-206ENST00000558093 SPINK2P20155 84 aa5.75□□□□□ -1.49
SPG11-206ENST00000558093 ZNF76P36508 570 aa5.75□□□□□ -1.49
SPG11-206ENST00000558093 MSMPQ1L6U9 139 aa5.75□□□□□ -1.49
SPG11-206ENST00000558093 ERMP1Q7Z2K6 904 aa5.75□□□□□ -1.49
SPG11-206ENST00000558093 FAM181AQ8N9Y4 354 aa5.75□□□□□ -1.49
SPG11-206ENST00000558093 XAGE3Q8WTP9 111 aa5.75□□□□□ -1.49
SPG11-206ENST00000558093 GATAD2BQ8WXI9 593 aa5.75□□□□□ -1.49
SPG11-206ENST00000558093 FOXQ1Q9C009 403 aa5.75□□□□□ -1.49
SPG11-206ENST00000558093 COPRSQ9NQ92 184 aa5.75□□□□□ -1.49
SPG11-206ENST00000558093 GTF2IRD1Q9UHL9 959 aa5.75□□□□□ -1.49
SPG11-206ENST00000558093 TACC3Q9Y6A5 838 aa5.75□□□□□ -1.49
SPG11-206ENST00000558093 GNAT3A8MTJ3 354 aa5.74□□□□□ -1.49
SPG11-206ENST00000558093 GFRA2O00451 464 aa5.74□□□□□ -1.49
SPG11-206ENST00000558093 ITIH2P19823 946 aa5.74□□□□□ -1.49
SPG11-206ENST00000558093 EIF4A3P38919 411 aaKnown RBP5.74□□□□□ -1.49
SPG11-206ENST00000558093 NKG7Q16617 165 aa5.74□□□□□ -1.49
SPG11-206ENST00000558093 PRAMEF13Q5VWM6 474 aa5.74□□□□□ -1.49
SPG11-206ENST00000558093 VSIG10LQ86VR7 867 aa5.74□□□□□ -1.49
SPG11-206ENST00000558093 DTX1Q86Y01 620 aa5.74□□□□□ -1.49
SPG11-206ENST00000558093 PSMG3-AS1Q96PY0 264 aa5.74□□□□□ -1.49
SPG11-206ENST00000558093 BACH2Q9BYV9 841 aa5.74□□□□□ -1.49
SPG11-206ENST00000558093 BSDC1Q9NW68 430 aaPredicted RBP5.74□□□□□ -1.49
SPG11-206ENST00000558093 ZC3H7BQ9UGR2 993 aaKnown RBP5.74□□□□□ -1.49
SPG11-206ENST00000558093 TPX2Q9ULW0 747 aaKnown RBP5.74□□□□□ -1.49
SPG11-206ENST00000558093 SUPT16HQ9Y5B9 1047 aaKnown RBP5.74□□□□□ -1.49
SPG11-206ENST00000558093 TLR3O15455 904 aaKnown RBP5.73□□□□□ -1.49
SPG11-206ENST00000558093 CILPO75339 1184 aa5.73□□□□□ -1.49
SPG11-206ENST00000558093 WNT11O96014 354 aa5.73□□□□□ -1.49
SPG11-206ENST00000558093 PLCG1P19174 1290 aa5.73□□□□□ -1.49
SPG11-206ENST00000558093 MPP2Q14168 576 aa5.73□□□□□ -1.49
SPG11-206ENST00000558093 SLBPQ14493 270 aaKnown RBP eCLIP5.73□□□□□ -1.49
SPG11-206ENST00000558093 CWF19L2Q2TBE0 894 aaKnown RBP5.73□□□□□ -1.49
SPG11-206ENST00000558093 XP32Q5T750 250 aa5.73□□□□□ -1.49
SPG11-206ENST00000558093 MFSD2AQ8NA29 543 aa5.73□□□□□ -1.49
SPG11-206ENST00000558093 NETO1Q8TDF5 533 aa5.73□□□□□ -1.49
SPG11-206ENST00000558093 DPH2Q9BQC3 489 aaPredicted RBP5.73□□□□□ -1.49
SPG11-206ENST00000558093 PRDM5Q9NQX1 630 aaPredicted RBP5.73□□□□□ -1.49
SPG11-206ENST00000558093 FAM221AA4D161 298 aa5.72□□□□□ -1.49
SPG11-206ENST00000558093 GRIN3BO60391 1043 aa5.72□□□□□ -1.49
SPG11-206ENST00000558093 CEACAM5P06731 702 aa5.72□□□□□ -1.49
SPG11-206ENST00000558093 CAP2P40123 477 aa5.72□□□□□ -1.49
SPG11-206ENST00000558093 ZNF746Q6NUN9 644 aaPredicted RBP5.72□□□□□ -1.49
SPG11-206ENST00000558093 FAM196AQ6ZSG2 479 aa5.72□□□□□ -1.49
SPG11-206ENST00000558093 REC114Q7Z4M0 266 aa5.72□□□□□ -1.49
SPG11-206ENST00000558093 PLD6Q8N2A8 252 aaKnown RBP5.72□□□□□ -1.49
SPG11-206ENST00000558093 FLCNQ8NFG4 579 aa5.72□□□□□ -1.49
SPG11-206ENST00000558093 MRRFQ96E11 262 aaKnown RBP5.72□□□□□ -1.49
SPG11-206ENST00000558093 TMEM87BQ96K49 555 aa5.72□□□□□ -1.49
SPG11-206ENST00000558093 METTL5Q9NRN9 209 aaKnown RBP5.72□□□□□ -1.49
SPG11-206ENST00000558093 TJP2Q9UDY2 1190 aa5.72□□□□□ -1.49
SPG11-206ENST00000558093 KLHL3Q9UH77 587 aa5.72□□□□□ -1.49
SPG11-206ENST00000558093 ADAM30Q9UKF2 790 aa5.72□□□□□ -1.49
SPG11-206ENST00000558093 CORINQ9Y5Q5 1042 aa5.72□□□□□ -1.49
SPG11-206ENST00000558093 RECKO95980 971 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 CST3P01034 146 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms