RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 NPM3O75607 178 aaKnown RBP12.91□□□□□ -0.34
SPTLC2-205ENST00000556607 CYP7A1P22680 504 aa12.91□□□□□ -0.34
SPTLC2-205ENST00000556607 HOXD10P28358 340 aa12.91□□□□□ -0.34
SPTLC2-205ENST00000556607 MAP3K10Q02779 954 aa12.91□□□□□ -0.34
SPTLC2-205ENST00000556607 HSP90AB4PQ58FF6 505 aa12.91□□□□□ -0.34
SPTLC2-205ENST00000556607 PRRT2Q7Z6L0 340 aaPredicted RBP12.91□□□□□ -0.34
SPTLC2-205ENST00000556607 RAET1EQ8TD07 263 aa12.91□□□□□ -0.34
SPTLC2-205ENST00000556607 SMCR8Q8TEV9 937 aaPredicted RBP12.91□□□□□ -0.34
SPTLC2-205ENST00000556607 PIH1D3Q9NQM4 214 aaKnown RBP12.91□□□□□ -0.34
SPTLC2-205ENST00000556607 NDUFB9Q9Y6M9 179 aa12.91□□□□□ -0.34
SPTLC2-205ENST00000556607 MYH1P12882 1939 aa12.9□□□□□ -0.34
SPTLC2-205ENST00000556607 GNRH1P01148 92 aa12.9□□□□□ -0.34
SPTLC2-205ENST00000556607 PRMT2P55345 433 aa12.9□□□□□ -0.34
SPTLC2-205ENST00000556607 MOGSQ13724 837 aa12.9□□□□□ -0.34
SPTLC2-205ENST00000556607 GPAT2Q6NUI2 795 aa12.9□□□□□ -0.34
SPTLC2-205ENST00000556607 ADGRA1Q86SQ6 560 aa12.9□□□□□ -0.34
SPTLC2-205ENST00000556607 SH3TC2Q8TF17 1288 aa12.9□□□□□ -0.34
SPTLC2-205ENST00000556607 ARMC5Q96C12 935 aa12.9□□□□□ -0.34
SPTLC2-205ENST00000556607 ZNF512BQ96KM6 892 aaPredicted RBP12.9□□□□□ -0.34
SPTLC2-205ENST00000556607 DHX36Q9H2U1 1008 aaKnown RBP12.9□□□□□ -0.34
SPTLC2-205ENST00000556607 PI4KBQ9UBF8 816 aa12.9□□□□□ -0.34
SPTLC2-205ENST00000556607 SAP30BPQ9UHR5 308 aaKnown RBP12.9□□□□□ -0.34
SPTLC2-205ENST00000556607 RCAN3Q9UKA8 241 aa12.9□□□□□ -0.34
SPTLC2-205ENST00000556607 DDX19BQ9UMR2 479 aa12.9□□□□□ -0.34
SPTLC2-205ENST00000556607 RBBP6Q7Z6E9 1792 aaKnown RBP12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 HMMRO75330 724 aa12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 HLA-DOAP06340 250 aa12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 EN2P19622 333 aaPredicted RBP12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 CAP2P40123 477 aa12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 USP5P45974 858 aa12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 DYNLL1P63167 89 aaKnown RBP12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 SPP2Q13103 211 aa12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 CLASRPQ8N2M8 674 aaKnown RBP12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 MAGEB6Q8N7X4 407 aa12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 MIGA1Q8NAN2 632 aa12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 RHPN1Q8TCX5 695 aa12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 CHMP4BQ9H444 224 aaKnown RBP12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 AS3MTQ9HBK9 375 aa12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 BIN2Q9UBW5 565 aaPredicted RBP12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 HERC5Q9UII4 1024 aaKnown RBP12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 PALD1Q9ULE6 856 aa12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 COL2A1P02458 1487 aaPredicted RBP12.89□□□□□ -0.35
SPTLC2-205ENST00000556607 FLT1P17948 1338 aa12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 MYPNQ86TC9 1320 aa12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 USP17L5A8MUK1 530 aa12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 IFIT2P09913 472 aaKnown RBP12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 OSBPP22059 807 aa12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 FCGRTP55899 365 aa12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 PPP4CP60510 307 aa12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 MAP3K12Q12852 859 aa12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 RPAP2Q8IXW5 612 aaPredicted RBP12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 ZNF333Q96JL9 665 aa12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 TRIM47Q96LD4 638 aa12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 SRRDQ9UH36 339 aa12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 PNMA3Q9UL41 463 aa12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 AGTPBP1Q9UPW5 1226 aa12.88□□□□□ -0.35
SPTLC2-205ENST00000556607 TNRC18O15417 2968 aaPredicted RBP12.87□□□□□ -0.35
SPTLC2-205ENST00000556607 IGSF3O75054 1194 aa12.87□□□□□ -0.35
SPTLC2-205ENST00000556607 CTGFP29279 349 aa12.87□□□□□ -0.35
SPTLC2-205ENST00000556607 HMGCS2P54868 508 aa12.87□□□□□ -0.35
SPTLC2-205ENST00000556607 FOXP4Q8IVH2 680 aaPredicted RBP12.87□□□□□ -0.35
SPTLC2-205ENST00000556607 ANKRD13CQ8N6S4 541 aa12.87□□□□□ -0.35
SPTLC2-205ENST00000556607 ZNF280CQ8ND82 737 aa12.87□□□□□ -0.35
SPTLC2-205ENST00000556607 KIF1BPQ96EK5 621 aa12.87□□□□□ -0.35
SPTLC2-205ENST00000556607 DNAJC2Q99543 621 aaKnown RBP12.87□□□□□ -0.35
SPTLC2-205ENST00000556607 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
SPTLC2-205ENST00000556607 TAOK2Q9UL54 1235 aa12.87□□□□□ -0.35
SPTLC2-205ENST00000556607 SLC45A1Q9Y2W3 748 aa12.87□□□□□ -0.35
SPTLC2-205ENST00000556607 SIPA1L1O43166 1804 aa12.87□□□□□ -0.35
SPTLC2-205ENST00000556607 ADGRA2Q96PE1 1338 aa12.87□□□□□ -0.35
SPTLC2-205ENST00000556607 GDF11O95390 407 aa12.86□□□□□ -0.35
SPTLC2-205ENST00000556607 BCRP11274 1271 aa12.86□□□□□ -0.35
SPTLC2-205ENST00000556607 GRK4P32298 578 aa12.86□□□□□ -0.35
SPTLC2-205ENST00000556607 PABPC4Q13310 644 aaKnown RBP eCLIP12.86□□□□□ -0.35
SPTLC2-205ENST00000556607 TTF1Q15361 905 aaPredicted RBP12.86□□□□□ -0.35
SPTLC2-205ENST00000556607 TREML2Q5T2D2 321 aa12.86□□□□□ -0.35
SPTLC2-205ENST00000556607 PRPF38BQ5VTL8 546 aaKnown RBP12.86□□□□□ -0.35
SPTLC2-205ENST00000556607 PROCA1Q8NCQ7 364 aaPredicted RBP12.86□□□□□ -0.35
SPTLC2-205ENST00000556607 TMOD4Q9NZQ9 345 aa12.86□□□□□ -0.35
SPTLC2-205ENST00000556607 LOC285556D6RIA3 1793 aa12.85□□□□□ -0.35
SPTLC2-205ENST00000556607 TNPO2O14787 897 aaKnown RBP12.85□□□□□ -0.35
SPTLC2-205ENST00000556607 ASNSP08243 561 aa12.85□□□□□ -0.35
SPTLC2-205ENST00000556607 PRKCZQ05513 592 aa12.85□□□□□ -0.35
SPTLC2-205ENST00000556607 RRP1BQ14684 758 aaKnown RBP12.85□□□□□ -0.35
SPTLC2-205ENST00000556607 CERS3Q8IU89 383 aa12.85□□□□□ -0.35
SPTLC2-205ENST00000556607 ZBTB40Q9NUA8 1239 aa12.85□□□□□ -0.35
SPTLC2-205ENST00000556607 GABRQQ9UN88 632 aa12.85□□□□□ -0.35
SPTLC2-205ENST00000556607 MAGEB6P1A0A0J9YX57 407 aa12.84□□□□□ -0.35
SPTLC2-205ENST00000556607 GOLIM4O00461 696 aa12.84□□□□□ -0.35
SPTLC2-205ENST00000556607 RAB11FIP3O75154 756 aa12.84□□□□□ -0.35
SPTLC2-205ENST00000556607 UBXN2AP68543 259 aa12.84□□□□□ -0.35
SPTLC2-205ENST00000556607 MTMR2Q13614 643 aa12.84□□□□□ -0.35
SPTLC2-205ENST00000556607 SLC9C2Q5TAH2 1124 aa12.84□□□□□ -0.35
SPTLC2-205ENST00000556607 NAV1Q8NEY1 1877 aa12.83□□□□□ -0.36
SPTLC2-205ENST00000556607 USP17L10C9JJH3 530 aa12.83□□□□□ -0.36
SPTLC2-205ENST00000556607 POLR3DP05423 398 aaPredicted RBP12.83□□□□□ -0.36
SPTLC2-205ENST00000556607 IRX3P78415 501 aaPredicted RBP12.83□□□□□ -0.36
SPTLC2-205ENST00000556607 MTFR1Q15390 333 aa12.83□□□□□ -0.36
SPTLC2-205ENST00000556607 TTC6Q86TZ1 520 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms