RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ASCC2Q9H1I8 757 aaPredicted RBP17.33■□□□□ 0.36
ACTN1-219ENST00000556432 UNC80Q8N2C7 3258 aa17.33■□□□□ 0.36
ACTN1-219ENST00000556432 PHIPQ8WWQ0 1821 aa17.33■□□□□ 0.36
ACTN1-219ENST00000556432 MDM2Q00987 491 aaPredicted RBP17.32■□□□□ 0.36
ACTN1-219ENST00000556432 ZNF280CQ8ND82 737 aa17.32■□□□□ 0.36
ACTN1-219ENST00000556432 TRIB2Q92519 343 aa17.32■□□□□ 0.36
ACTN1-219ENST00000556432 GJD2Q9UKL4 321 aa17.32■□□□□ 0.36
ACTN1-219ENST00000556432 OGDHLQ9ULD0 1010 aa17.32■□□□□ 0.36
ACTN1-219ENST00000556432 PFASO15067 1338 aa17.31■□□□□ 0.36
ACTN1-219ENST00000556432 PTPRCP08575 1304 aa17.31■□□□□ 0.36
ACTN1-219ENST00000556432 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
ACTN1-219ENST00000556432 SPTY2D1Q68D10 685 aaPredicted RBP17.31■□□□□ 0.36
ACTN1-219ENST00000556432 MROH7-TTC4A0A0A0MT08 1334 aa17.3■□□□□ 0.36
ACTN1-219ENST00000556432 ADORA1P30542 326 aa17.3■□□□□ 0.36
ACTN1-219ENST00000556432 PDE3AQ14432 1141 aa17.3■□□□□ 0.36
ACTN1-219ENST00000556432 CCAR1Q8IX12 1150 aaKnown RBP17.3■□□□□ 0.36
ACTN1-219ENST00000556432 MRPL50Q8N5N7 158 aaKnown RBP17.3■□□□□ 0.36
ACTN1-219ENST00000556432 FAM161BQ96MY7 647 aa17.3■□□□□ 0.36
ACTN1-219ENST00000556432 NUDT12Q9BQG2 462 aa17.3■□□□□ 0.36
ACTN1-219ENST00000556432 OSBPL5Q9H0X9 879 aaPredicted RBP17.3■□□□□ 0.36
ACTN1-219ENST00000556432 TBC1D12O60347 775 aa17.29■□□□□ 0.36
ACTN1-219ENST00000556432 CIAO1O76071 339 aa17.29■□□□□ 0.36
ACTN1-219ENST00000556432 ZKSCAN1P17029 563 aaPredicted RBP17.29■□□□□ 0.36
ACTN1-219ENST00000556432 RASGRF1Q13972 1273 aa17.29■□□□□ 0.36
ACTN1-219ENST00000556432 CCDC102BQ68D86 513 aa17.29■□□□□ 0.36
ACTN1-219ENST00000556432 TBC1D2Q9BYX2 928 aa17.29■□□□□ 0.36
ACTN1-219ENST00000556432 LOC285556D6RIA3 1793 aa17.28■□□□□ 0.36
ACTN1-219ENST00000556432 USP17L5A8MUK1 530 aa17.28■□□□□ 0.36
ACTN1-219ENST00000556432 SOCS4Q8WXH5 440 aa17.28■□□□□ 0.36
ACTN1-219ENST00000556432 LBHD1Q9BQE6 289 aaPredicted RBP17.28■□□□□ 0.36
ACTN1-219ENST00000556432 AS3MTQ9HBK9 375 aa17.28■□□□□ 0.36
ACTN1-219ENST00000556432 CWC22Q9HCG8 908 aaKnown RBP17.28■□□□□ 0.36
ACTN1-219ENST00000556432 TMOD4Q9NZQ9 345 aa17.28■□□□□ 0.36
ACTN1-219ENST00000556432 FBXO3Q9UK99 471 aa17.28■□□□□ 0.36
ACTN1-219ENST00000556432 UBTFL1P0CB47 393 aaPredicted RBP17.27■□□□□ 0.36
ACTN1-219ENST00000556432 CAP2P40123 477 aa17.27■□□□□ 0.36
ACTN1-219ENST00000556432 IL15P40933 162 aaPredicted RBP17.27■□□□□ 0.36
ACTN1-219ENST00000556432 MECOMQ03112 1051 aa17.27■□□□□ 0.36
ACTN1-219ENST00000556432 MTMR2Q13614 643 aa17.27■□□□□ 0.36
ACTN1-219ENST00000556432 LRRC26Q2I0M4 334 aa17.27■□□□□ 0.36
ACTN1-219ENST00000556432 MAP3K21Q5TCX8 1036 aa17.27■□□□□ 0.36
ACTN1-219ENST00000556432 ERICH6Q7L0X2 663 aa17.27■□□□□ 0.36
ACTN1-219ENST00000556432 MORF4L1Q9UBU8 362 aa17.27■□□□□ 0.36
ACTN1-219ENST00000556432 PEX10O60683 326 aa17.26■□□□□ 0.35
ACTN1-219ENST00000556432 RHBDL3P58872 404 aa17.26■□□□□ 0.35
ACTN1-219ENST00000556432 TRMT44Q8IYL2 757 aaKnown RBP17.26■□□□□ 0.35
ACTN1-219ENST00000556432 GPRC5AQ8NFJ5 357 aa17.26■□□□□ 0.35
ACTN1-219ENST00000556432 FAM163AQ96GL9 167 aaPredicted RBP17.26■□□□□ 0.35
ACTN1-219ENST00000556432 GUCD1Q96NT3 240 aa17.26■□□□□ 0.35
ACTN1-219ENST00000556432 PA2G4Q9UQ80 394 aaKnown RBP17.26■□□□□ 0.35
ACTN1-219ENST00000556432 GPR75-ASB3A0A0A6YYF3 556 aa17.25■□□□□ 0.35
ACTN1-219ENST00000556432 COL6A1P12109 1028 aa17.25■□□□□ 0.35
ACTN1-219ENST00000556432 XRCC5P13010 732 aaKnown RBP17.25■□□□□ 0.35
ACTN1-219ENST00000556432 GSTO1P78417 241 aa17.25■□□□□ 0.35
ACTN1-219ENST00000556432 CACNB2Q08289 660 aaPredicted RBP17.25■□□□□ 0.35
ACTN1-219ENST00000556432 P2RX7Q99572 595 aaKnown RBP17.25■□□□□ 0.35
ACTN1-219ENST00000556432 PLXNB2O15031 1838 aa17.24■□□□□ 0.35
ACTN1-219ENST00000556432 ATAD5Q96QE3 1844 aa17.24■□□□□ 0.35
ACTN1-219ENST00000556432 CCND3P30281 292 aaPredicted RBP17.24■□□□□ 0.35
ACTN1-219ENST00000556432 MAPK4P31152 587 aa17.24■□□□□ 0.35
ACTN1-219ENST00000556432 SH3D19Q5HYK7 790 aa17.24■□□□□ 0.35
ACTN1-219ENST00000556432 ZNF697Q5TEC3 545 aa17.24■□□□□ 0.35
ACTN1-219ENST00000556432 FAM109BQ6ICB4 259 aaPredicted RBP17.24■□□□□ 0.35
ACTN1-219ENST00000556432 PAGR1Q9BTK6 254 aa17.24■□□□□ 0.35
ACTN1-219ENST00000556432 PDS5AQ29RF7 1337 aaKnown RBP17.23■□□□□ 0.35
ACTN1-219ENST00000556432 NPM3O75607 178 aaKnown RBP17.23■□□□□ 0.35
ACTN1-219ENST00000556432 LDHCP07864 332 aa17.23■□□□□ 0.35
ACTN1-219ENST00000556432 RGS2P41220 211 aa17.23■□□□□ 0.35
ACTN1-219ENST00000556432 TIMM10P62072 90 aa17.23■□□□□ 0.35
ACTN1-219ENST00000556432 HERVK_113P62684 666 aa17.23■□□□□ 0.35
ACTN1-219ENST00000556432 RRP1BQ14684 758 aaKnown RBP17.23■□□□□ 0.35
ACTN1-219ENST00000556432 CCL14Q16627 93 aa17.23■□□□□ 0.35
ACTN1-219ENST00000556432 TEX11Q8IYF3 940 aa17.23■□□□□ 0.35
ACTN1-219ENST00000556432 SSH1Q8WYL5 1049 aa17.23■□□□□ 0.35
ACTN1-219ENST00000556432 TRIM34Q9BYJ4 488 aa17.23■□□□□ 0.35
ACTN1-219ENST00000556432 TXNRD2Q9NNW7 524 aa17.23■□□□□ 0.35
ACTN1-219ENST00000556432 RAI14Q9P0K7 980 aa17.23■□□□□ 0.35
ACTN1-219ENST00000556432 PRKAG2Q9UGJ0 569 aa17.23■□□□□ 0.35
ACTN1-219ENST00000556432 HERC5Q9UII4 1024 aaKnown RBP17.23■□□□□ 0.35
ACTN1-219ENST00000556432 POTEB2H3BUK9 544 aa17.22■□□□□ 0.35
ACTN1-219ENST00000556432 BACE1P56817 501 aa17.22■□□□□ 0.35
ACTN1-219ENST00000556432 MVPQ14764 893 aaKnown RBP17.22■□□□□ 0.35
ACTN1-219ENST00000556432 PLEKHH3Q7Z736 793 aa17.22■□□□□ 0.35
ACTN1-219ENST00000556432 FAM9BQ8IZU0 186 aa17.22■□□□□ 0.35
ACTN1-219ENST00000556432 APBA2Q99767 749 aa17.22■□□□□ 0.35
ACTN1-219ENST00000556432 NOL10Q9BSC4 688 aaKnown RBP17.22■□□□□ 0.35
ACTN1-219ENST00000556432 SENP6Q9GZR1 1112 aaPredicted RBP17.22■□□□□ 0.35
ACTN1-219ENST00000556432 COL2A1P02458 1487 aaPredicted RBP17.21■□□□□ 0.35
ACTN1-219ENST00000556432 A0A1B0GUL7 405 aa17.21■□□□□ 0.35
ACTN1-219ENST00000556432 MAP4K4O95819 1239 aaPredicted RBP17.21■□□□□ 0.35
ACTN1-219ENST00000556432 ASNSP08243 561 aa17.21■□□□□ 0.35
ACTN1-219ENST00000556432 ATN1P54259 1190 aaPredicted RBP17.21■□□□□ 0.35
ACTN1-219ENST00000556432 ERVK-9P63128 1117 aa17.21■□□□□ 0.35
ACTN1-219ENST00000556432 ERVK-24P63145 666 aa17.21■□□□□ 0.35
ACTN1-219ENST00000556432 GORABQ5T7V8 394 aa17.21■□□□□ 0.35
ACTN1-219ENST00000556432 LHX8Q68G74 356 aa17.21■□□□□ 0.35
ACTN1-219ENST00000556432 GPR142Q7Z601 462 aa17.21■□□□□ 0.35
ACTN1-219ENST00000556432 XAGE2Q96GT9 111 aa17.21■□□□□ 0.35
ACTN1-219ENST00000556432 WDR18Q9BV38 432 aa17.21■□□□□ 0.35
ACTN1-219ENST00000556432 PORCNQ9H237 461 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms