RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 SLC4A8Q2Y0W8 1093 aa24.2■■□□□ 1.46
PRKCH-219ENST00000555906 DIEXFQ68CQ4 756 aaKnown RBP24.2■■□□□ 1.46
PRKCH-219ENST00000555906 NAA16Q6N069 864 aaPredicted RBP24.2■■□□□ 1.46
PRKCH-219ENST00000555906 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.2■■□□□ 1.46
PRKCH-219ENST00000555906 TRIM75PA6NK02 468 aa24.19■■□□□ 1.46
PRKCH-219ENST00000555906 FAM196BA6NMK8 535 aa24.19■■□□□ 1.46
PRKCH-219ENST00000555906 PLCG2P16885 1265 aa24.19■■□□□ 1.46
PRKCH-219ENST00000555906 FCGRTP55899 365 aa24.19■■□□□ 1.46
PRKCH-219ENST00000555906 SH3RF3Q8TEJ3 882 aaPredicted RBP24.19■■□□□ 1.46
PRKCH-219ENST00000555906 TBC1D2Q9BYX2 928 aa24.19■■□□□ 1.46
PRKCH-219ENST00000555906 SNRKQ9NRH2 765 aa24.19■■□□□ 1.46
PRKCH-219ENST00000555906 HERC5Q9UII4 1024 aaKnown RBP24.19■■□□□ 1.46
PRKCH-219ENST00000555906 AGTPBP1Q9UPW5 1226 aa24.19■■□□□ 1.46
PRKCH-219ENST00000555906 ECM2O94769 699 aaPredicted RBP24.18■■□□□ 1.46
PRKCH-219ENST00000555906 BAG3O95817 575 aa24.18■■□□□ 1.46
PRKCH-219ENST00000555906 CYP2E1P05181 493 aaPredicted RBP24.18■■□□□ 1.46
PRKCH-219ENST00000555906 RAET1EQ8TD07 263 aa24.18■■□□□ 1.46
PRKCH-219ENST00000555906 DBNLQ9UJU6 430 aaKnown RBP24.18■■□□□ 1.46
PRKCH-219ENST00000555906 CCDC84Q86UT8 332 aaPredicted RBP24.17■■□□□ 1.46
PRKCH-219ENST00000555906 PROCA1Q8NCQ7 364 aaPredicted RBP24.17■■□□□ 1.46
PRKCH-219ENST00000555906 AATFQ9NY61 560 aaKnown RBP eCLIP24.17■■□□□ 1.46
PRKCH-219ENST00000555906 MYH1P12882 1939 aa24.17■■□□□ 1.46
PRKCH-219ENST00000555906 PPP4CP60510 307 aa24.16■■□□□ 1.46
PRKCH-219ENST00000555906 CEP85Q6P2H3 762 aa24.16■■□□□ 1.46
PRKCH-219ENST00000555906 SMCR8Q8TEV9 937 aaPredicted RBP24.16■■□□□ 1.46
PRKCH-219ENST00000555906 GCC1Q96CN9 775 aa24.16■■□□□ 1.46
PRKCH-219ENST00000555906 DHX36Q9H2U1 1008 aaKnown RBP24.16■■□□□ 1.46
PRKCH-219ENST00000555906 TLR7Q9NYK1 1049 aaKnown RBP24.16■■□□□ 1.46
PRKCH-219ENST00000555906 PNMA3Q9UL41 463 aa24.16■■□□□ 1.46
PRKCH-219ENST00000555906 FLT1P17948 1338 aa24.15■■□□□ 1.46
PRKCH-219ENST00000555906 MYCP01106 439 aaPredicted RBP24.15■■□□□ 1.46
PRKCH-219ENST00000555906 GRK4P32298 578 aa24.15■■□□□ 1.46
PRKCH-219ENST00000555906 CAP2P40123 477 aa24.15■■□□□ 1.46
PRKCH-219ENST00000555906 PRKCZQ05513 592 aa24.15■■□□□ 1.46
PRKCH-219ENST00000555906 ADGRA1Q86SQ6 560 aa24.15■■□□□ 1.46
PRKCH-219ENST00000555906 PI4KBQ9UBF8 816 aa24.15■■□□□ 1.46
PRKCH-219ENST00000555906 ZAP70P43403 619 aa24.14■■□□□ 1.45
PRKCH-219ENST00000555906 DDX60LQ5H9U9 1706 aaKnown RBP24.14■■□□□ 1.45
PRKCH-219ENST00000555906 ZNF280CQ8ND82 737 aa24.14■■□□□ 1.45
PRKCH-219ENST00000555906 DOCK3Q8IZD9 2030 aa24.13■■□□□ 1.45
PRKCH-219ENST00000555906 TREML2Q5T2D2 321 aa24.13■■□□□ 1.45
PRKCH-219ENST00000555906 ERC1Q8IUD2 1116 aa24.13■■□□□ 1.45
PRKCH-219ENST00000555906 SLAIN1Q8ND83 568 aa24.13■■□□□ 1.45
PRKCH-219ENST00000555906 EAF2Q96CJ1 260 aaPredicted RBP24.13■■□□□ 1.45
PRKCH-219ENST00000555906 PIH1D3Q9NQM4 214 aaKnown RBP24.13■■□□□ 1.45
PRKCH-219ENST00000555906 SPP2Q13103 211 aa24.12■■□□□ 1.45
PRKCH-219ENST00000555906 RRP1BQ14684 758 aaKnown RBP24.12■■□□□ 1.45
PRKCH-219ENST00000555906 MTFR1Q15390 333 aa24.12■■□□□ 1.45
PRKCH-219ENST00000555906 MAPKAPK5Q8IW41 473 aa24.12■■□□□ 1.45
PRKCH-219ENST00000555906 AS3MTQ9HBK9 375 aa24.12■■□□□ 1.45
PRKCH-219ENST00000555906 USP17L5A8MUK1 530 aa24.11■■□□□ 1.45
PRKCH-219ENST00000555906 FAM110CQ1W6H9 321 aa24.11■■□□□ 1.45
PRKCH-219ENST00000555906 METTL16Q86W50 562 aaKnown RBP24.11■■□□□ 1.45
PRKCH-219ENST00000555906 TGFBRAP1Q8WUH2 860 aa24.11■■□□□ 1.45
PRKCH-219ENST00000555906 SHISA4Q96DD7 197 aa24.11■■□□□ 1.45
PRKCH-219ENST00000555906 CCDC8Q9H0W5 538 aaPredicted RBP24.11■■□□□ 1.45
PRKCH-219ENST00000555906 DNAJC18Q9H819 358 aa24.11■■□□□ 1.45
PRKCH-219ENST00000555906 NAV1Q8NEY1 1877 aa24.11■■□□□ 1.45
PRKCH-219ENST00000555906 CEP290O15078 2479 aa24.1■■□□□ 1.45
PRKCH-219ENST00000555906 HMGCS2P54868 508 aa24.1■■□□□ 1.45
PRKCH-219ENST00000555906 PABPC4Q13310 644 aaKnown RBP eCLIP24.1■■□□□ 1.452e-7■■■■■ 64.2
PRKCH-219ENST00000555906 SH3D19Q5HYK7 790 aa24.1■■□□□ 1.45
PRKCH-219ENST00000555906 CERS3Q8IU89 383 aa24.1■■□□□ 1.45
PRKCH-219ENST00000555906 GABRQQ9UN88 632 aa24.1■■□□□ 1.45
PRKCH-219ENST00000555906 TNPO2O14787 897 aaKnown RBP24.09■■□□□ 1.45
PRKCH-219ENST00000555906 ASNSP08243 561 aa24.09■■□□□ 1.45
PRKCH-219ENST00000555906 UBXN2AP68543 259 aa24.09■■□□□ 1.45
PRKCH-219ENST00000555906 TMED8Q6PL24 325 aaPredicted RBP24.09■■□□□ 1.45
PRKCH-219ENST00000555906 ANKRD13CQ8N6S4 541 aa24.09■■□□□ 1.45
PRKCH-219ENST00000555906 NKX2-3Q8TAU0 364 aa24.09■■□□□ 1.45
PRKCH-219ENST00000555906 PANK1Q8TE04 598 aa24.09■■□□□ 1.45
PRKCH-219ENST00000555906 WDR18Q9BV38 432 aa24.09■■□□□ 1.45
PRKCH-219ENST00000555906 EXOC6BQ9Y2D4 811 aa24.09■■□□□ 1.45
PRKCH-219ENST00000555906 CCL5P13501 91 aa24.08■■□□□ 1.45
PRKCH-219ENST00000555906 CYP7A1P22680 504 aa24.08■■□□□ 1.45
PRKCH-219ENST00000555906 IRF5Q13568 498 aa24.08■■□□□ 1.45
PRKCH-219ENST00000555906 CRACR2BQ8N4Y2 399 aaPredicted RBP24.08■■□□□ 1.45
PRKCH-219ENST00000555906 TRIM34Q9BYJ4 488 aa24.08■■□□□ 1.45
PRKCH-219ENST00000555906 GINM1Q9NU53 330 aa24.08■■□□□ 1.45
PRKCH-219ENST00000555906 IDH1O75874 414 aaKnown RBP24.07■■□□□ 1.44
PRKCH-219ENST00000555906 HLA-DOAP06340 250 aa24.07■■□□□ 1.44
PRKCH-219ENST00000555906 GJB1P08034 283 aa24.07■■□□□ 1.44
PRKCH-219ENST00000555906 MS4A1P11836 297 aa24.07■■□□□ 1.44
PRKCH-219ENST00000555906 GCLCP48506 637 aaPredicted RBP24.07■■□□□ 1.44
PRKCH-219ENST00000555906 FLT3LGP49771 235 aa24.07■■□□□ 1.44
PRKCH-219ENST00000555906 HSP90AB4PQ58FF6 505 aa24.07■■□□□ 1.44
PRKCH-219ENST00000555906 AACSQ86V21 672 aa24.07■■□□□ 1.44
PRKCH-219ENST00000555906 FOXP4Q8IVH2 680 aaPredicted RBP24.07■■□□□ 1.44
PRKCH-219ENST00000555906 BIN2Q9UBW5 565 aaPredicted RBP24.07■■□□□ 1.44
PRKCH-219ENST00000555906 PALD1Q9ULE6 856 aa24.07■■□□□ 1.44
PRKCH-219ENST00000555906 ADCY3O60266 1144 aa24.06■■□□□ 1.44
PRKCH-219ENST00000555906 GJA8P48165 433 aa24.06■■□□□ 1.44
PRKCH-219ENST00000555906 DYNLL1P63167 89 aaKnown RBP24.06■■□□□ 1.44
PRKCH-219ENST00000555906 PXYLP1Q8TE99 480 aa24.06■■□□□ 1.44
PRKCH-219ENST00000555906 PLXNB2O15031 1838 aa24.05■■□□□ 1.44
PRKCH-219ENST00000555906 MTMR2Q13614 643 aa24.05■■□□□ 1.44
PRKCH-219ENST00000555906 COA7Q96BR5 231 aa24.05■■□□□ 1.44
PRKCH-219ENST00000555906 RNF208Q9H0X6 261 aa24.05■■□□□ 1.44
PRKCH-219ENST00000555906 ASCC2Q9H1I8 757 aaPredicted RBP24.05■■□□□ 1.44
PRKCH-219ENST00000555906 ZBTB21Q9ULJ3 1066 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms