RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 ZNF165P49910 485 aa17■□□□□ 0.31
PPP4R3A-201ENST00000554308 PHKBQ93100 1093 aa17■□□□□ 0.31
PPP4R3A-201ENST00000554308 IRS2Q9Y4H2 1338 aa17■□□□□ 0.31
PPP4R3A-201ENST00000554308 USP17L12C9JPN9 530 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 USP17L21D6R901 530 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 C6orf229H3BNL8 230 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 ZBTB43O43298 467 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 TNNT1P13805 278 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 CDC27P30260 824 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 ZNF804AQ7Z570 1209 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 CHMP4CQ96CF2 233 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 SCAND2PQ9GZW5 306 aaPredicted RBP16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 GGA1Q9UJY5 639 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 SLC12A7Q9Y666 1083 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 CCDC69A6NI79 296 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 DIXDC1Q155Q3 683 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 GRIK5Q16478 980 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 RBM43Q6ZSC3 357 aaKnown RBP16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 NLGN1Q8N2Q7 840 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 CCDC82Q8N4S0 544 aa16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 TDRD7Q8NHU6 1098 aaKnown RBP16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 FTOQ9C0B1 505 aaKnown RBP eCLIP16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 ZSCAN16Q9H4T2 348 aaPredicted RBP16.99■□□□□ 0.31
PPP4R3A-201ENST00000554308 A0A1B0GUL6 1792 aa16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 BBOX1O75936 387 aa16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 LDHBP07195 334 aaKnown RBP16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 OLFM4Q6UX06 510 aa16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 RNF41Q9H4P4 317 aaPredicted RBP16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 DDX19AQ9NUU7 478 aaKnown RBP16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 CLIP2Q9UDT6 1046 aa16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 POLLQ9UGP5 575 aa16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 USP27XA6NNY8 438 aa16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 RANBP6O60518 1105 aaKnown RBP16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 SART3Q15020 963 aaKnown RBP16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 CTR9Q6PD62 1173 aa16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 KLHL34Q8N239 644 aa16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 AKT1S1Q96B36 256 aa16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 C8orf76Q96K31 380 aa16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 AIFM3Q96NN9 605 aa16.98■□□□□ 0.31
PPP4R3A-201ENST00000554308 ERICH2A1L162 156 aa16.97■□□□□ 0.31
PPP4R3A-201ENST00000554308 MMP10P09238 476 aa16.97■□□□□ 0.31
PPP4R3A-201ENST00000554308 C11orf57Q6ZUT1 292 aaPredicted RBP16.97■□□□□ 0.31
PPP4R3A-201ENST00000554308 WDR66Q8TBY9 1149 aa16.97■□□□□ 0.31
PPP4R3A-201ENST00000554308 GOLGA8AA7E2F4 631 aa16.97■□□□□ 0.31
PPP4R3A-201ENST00000554308 POLR3DP05423 398 aaPredicted RBP16.97■□□□□ 0.31
PPP4R3A-201ENST00000554308 WTAPQ15007 396 aa16.97■□□□□ 0.31
PPP4R3A-201ENST00000554308 SPTY2D1Q68D10 685 aaPredicted RBP16.97■□□□□ 0.31
PPP4R3A-201ENST00000554308 ZNF592Q92610 1267 aa16.97■□□□□ 0.31
PPP4R3A-201ENST00000554308 UBAC1Q9BSL1 405 aa16.97■□□□□ 0.31
PPP4R3A-201ENST00000554308 CRNKL1Q9BZJ0 848 aaKnown RBP16.97■□□□□ 0.31
PPP4R3A-201ENST00000554308 CD209Q9NNX6 404 aa16.97■□□□□ 0.31
PPP4R3A-201ENST00000554308 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
PPP4R3A-201ENST00000554308 PDS5AQ29RF7 1337 aaKnown RBP16.96■□□□□ 0.31
PPP4R3A-201ENST00000554308 UBE2Q2LH0YL09 131 aa16.96■□□□□ 0.31
PPP4R3A-201ENST00000554308 RIMBP2O15034 1052 aa16.96■□□□□ 0.31
PPP4R3A-201ENST00000554308 LIFRP42702 1097 aa16.96■□□□□ 0.31
PPP4R3A-201ENST00000554308 TPD52L1Q16890 204 aaPredicted RBP16.96■□□□□ 0.31
PPP4R3A-201ENST00000554308 SYNE3Q6ZMZ3 975 aa16.96■□□□□ 0.31
PPP4R3A-201ENST00000554308 SGMS1Q86VZ5 419 aa16.96■□□□□ 0.31
PPP4R3A-201ENST00000554308 CMTR1Q8N1G2 835 aaKnown RBP16.96■□□□□ 0.31
PPP4R3A-201ENST00000554308 BRIP1Q9BX63 1249 aa16.96■□□□□ 0.31
PPP4R3A-201ENST00000554308 GTPBP4Q9BZE4 634 aaKnown RBP16.96■□□□□ 0.31
PPP4R3A-201ENST00000554308 DCP1AQ9NPI6 582 aaPredicted RBP16.96■□□□□ 0.31
PPP4R3A-201ENST00000554308 SMTNL1A8MU46 457 aa16.96■□□□□ 0.3
PPP4R3A-201ENST00000554308 HOXA10P31260 410 aaPredicted RBP16.96■□□□□ 0.3
PPP4R3A-201ENST00000554308 TBC1D16Q8TBP0 767 aa16.96■□□□□ 0.3
PPP4R3A-201ENST00000554308 NUP133Q8WUM0 1156 aa16.96■□□□□ 0.3
PPP4R3A-201ENST00000554308 ESR2Q92731 530 aa16.96■□□□□ 0.3
PPP4R3A-201ENST00000554308 ATP2B4P23634 1241 aa16.95■□□□□ 0.3
PPP4R3A-201ENST00000554308 CFAP45Q9UL16 551 aa16.95■□□□□ 0.3
PPP4R3A-201ENST00000554308 CYP2D6P10635 497 aa16.95■□□□□ 0.3
PPP4R3A-201ENST00000554308 FBXO18Q8NFZ0 1043 aa16.95■□□□□ 0.3
PPP4R3A-201ENST00000554308 PPEF1O14829 653 aaPredicted RBP16.94■□□□□ 0.3
PPP4R3A-201ENST00000554308 CPLX2Q6PUV4 134 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-201ENST00000554308 CRAMP1Q96RY5 1269 aa16.94■□□□□ 0.3
PPP4R3A-201ENST00000554308 FAM217BQ9NTX9 383 aaPredicted RBP16.94■□□□□ 0.3
PPP4R3A-201ENST00000554308 MCM9Q9NXL9 1143 aa16.94■□□□□ 0.3
PPP4R3A-201ENST00000554308 ANAPC4Q9UJX5 808 aa16.94■□□□□ 0.3
PPP4R3A-201ENST00000554308 IARSP41252 1262 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-201ENST00000554308 IQCB1Q15051 598 aa16.94■□□□□ 0.3
PPP4R3A-201ENST00000554308 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
PPP4R3A-201ENST00000554308 ERCC4Q92889 916 aaPredicted RBP16.94■□□□□ 0.3
PPP4R3A-201ENST00000554308 USP28Q96RU2 1077 aa16.94■□□□□ 0.3
PPP4R3A-201ENST00000554308 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.94■□□□□ 0.3
PPP4R3A-201ENST00000554308 V9GYY5 206 aaPredicted RBP16.94■□□□□ 0.3
PPP4R3A-201ENST00000554308 TNKSO95271 1327 aa16.93■□□□□ 0.3
PPP4R3A-201ENST00000554308 KLRG2A4D1S0 409 aaPredicted RBP16.93■□□□□ 0.3
PPP4R3A-201ENST00000554308 USP17L8P0C7I0 530 aa16.93■□□□□ 0.3
PPP4R3A-201ENST00000554308 SRGNP10124 158 aa16.93■□□□□ 0.3
PPP4R3A-201ENST00000554308 USP5P45974 858 aa16.93■□□□□ 0.3
PPP4R3A-201ENST00000554308 FBXW7Q969H0 707 aa16.93■□□□□ 0.3
PPP4R3A-201ENST00000554308 ALG1Q9BT22 464 aa16.93■□□□□ 0.3
PPP4R3A-201ENST00000554308 SLC26A6Q9BXS9 759 aa16.93■□□□□ 0.3
PPP4R3A-201ENST00000554308 PARP3Q9Y6F1 533 aa16.93■□□□□ 0.3
PPP4R3A-201ENST00000554308 CDKL5O76039 1030 aa16.93■□□□□ 0.3
PPP4R3A-201ENST00000554308 HMGB2P26583 209 aaKnown RBP16.93■□□□□ 0.3
PPP4R3A-201ENST00000554308 FAM47AQ5JRC9 791 aa16.93■□□□□ 0.3
PPP4R3A-201ENST00000554308 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.93■□□□□ 0.3
PPP4R3A-201ENST00000554308 CCDC112Q8NEF3 446 aa16.93■□□□□ 0.3
PPP4R3A-201ENST00000554308 SH3RF3Q8TEJ3 882 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms