RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 MICU3Q86XE3 530 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 PHKBQ93100 1093 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 LY9Q9HBG7 655 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 CLIP2Q9UDT6 1046 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 PCDHA7Q9UN72 937 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 ZMYM6O95789 1325 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 COL1A1P02452 1464 aaPredicted RBP10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 A0A087WWV3 80 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 PNMA6AP0CW24 399 aaPredicted RBP10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 ME1P48163 572 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 METAP2P50579 478 aaKnown RBP eCLIP10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 MUM1L1Q5H9M0 696 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 CLEC4GQ6UXB4 293 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 CCDC24Q8N4L8 307 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 ENGASEQ8NFI3 743 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 CELF1Q92879 486 aaKnown RBP10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 SMARCE1Q969G3 411 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 BRMS1Q9HCU9 246 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 FAM217BQ9NTX9 383 aaPredicted RBP10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 ARGLU1Q9NWB6 273 aaPredicted RBP10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 FAM53CQ9NYF3 392 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 LRP2BPQ9P2M1 347 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 SRP68Q9UHB9 627 aaKnown RBP10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 SLC4A4Q9Y6R1 1079 aa10.39□□□□□ -0.75
AL049839.2-201ENST00000553947 E2F4Q16254 413 aa10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 AMIGO3Q86WK7 504 aa10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 NGLY1Q96IV0 654 aa10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 CDC5LQ99459 802 aaKnown RBP10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 DNAJC25Q9H1X3 360 aa10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 ZCCHC17Q9NP64 241 aaKnown RBP10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 RRP15Q9Y3B9 282 aaKnown RBP10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 LMAN1P49257 510 aa10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 KIF23Q02241 960 aaPredicted RBP10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 SF3B3Q15393 1217 aaKnown RBP10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 NTRK3Q16288 839 aa10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 ARHGAP29Q52LW3 1261 aa10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 ANKRD18AQ8IVF6 992 aa10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 CACTINQ8WUQ7 758 aaKnown RBP10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 ERCC4Q92889 916 aaPredicted RBP10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 ZKSCAN3Q9BRR0 538 aa10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 RTEL1Q9NZ71 1219 aa10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 ABCF2Q9UG63 623 aa10.38□□□□□ -0.75
AL049839.2-201ENST00000553947 RANBP6O60518 1105 aaKnown RBP10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 CLCN6P51797 869 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 TMEM67Q5HYA8 995 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 CT47A1Q5JQC4 288 aaPredicted RBP10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 ATL3Q6DD88 541 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 FSIP1Q8NA03 581 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 LINC00301Q8NCQ3 95 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 FHOD1Q9Y613 1164 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 ZNF804BA4D1E1 1349 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 CASZ1Q86V15 1759 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 TOM1O60784 492 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 CYP7A1P22680 504 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 KLRK1P26718 216 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 PLA2G4AP47712 749 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 TDO2P48775 406 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 RRP12Q5JTH9 1297 aaKnown RBP10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 AKNAD1Q5T1N1 836 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 MYSM1Q5VVJ2 828 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 NFXL1Q6ZNB6 911 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 SDR42E1Q8WUS8 393 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 TMEM87BQ96K49 555 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 MINPP1Q9UNW1 487 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 CEP83Q9Y592 693 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 A0A1B0GVL5 298 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 USP27XA6NNY8 438 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 IFIT3O14879 490 aaKnown RBP10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 ZBTB43O43298 467 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 VPS72Q15906 364 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 SGMS1Q86VZ5 419 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 ALG1Q9BT22 464 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 PNPLA7Q6ZV29 1317 aa10.37□□□□□ -0.75
AL049839.2-201ENST00000553947 A0A1B0GUL6 1792 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 CCDC172P0C7W6 258 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 FAM160A1Q05DH4 1040 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 MFSD6Q6ZSS7 791 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 C11orf57Q6ZUT1 292 aaPredicted RBP10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 SRLQ86TD4 932 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 ZNF384Q8TF68 577 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 CNTNAP4Q9C0A0 1308 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 BSDC1Q9NW68 430 aaPredicted RBP10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 GOLGA8AA7E2F4 631 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 SKILP12757 684 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 ZNF165P49910 485 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 KRT40Q6A162 431 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 CCDC73Q6ZRK6 1079 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 SLC51AQ86UW1 340 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 FAM84BQ96KN1 310 aaPredicted RBP10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 RAI14Q9P0K7 980 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 CHD4Q14839 1912 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 TIAM2Q8IVF5 1701 aa10.36□□□□□ -0.75
AL049839.2-201ENST00000553947 LIFRP42702 1097 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 NDUFA8P51970 172 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 STK38Q15208 465 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 ADALQ6DHV7 355 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 FILIP1Q7Z7B0 1213 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 FMR1NBQ8N0W7 255 aaPredicted RBP10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 STAG1Q8WVM7 1258 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 UBXN4Q92575 508 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms