RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 CENPQQ7L2Z9 268 aaPredicted RBP13.87□□□□□ -0.19
TMEM116-218ENST00000552839 WDR66Q8TBY9 1149 aa13.87□□□□□ -0.19
TMEM116-218ENST00000552839 LRCH3Q96II8 777 aa13.87□□□□□ -0.19
TMEM116-218ENST00000552839 GNL3LQ9NVN8 582 aaKnown RBP13.87□□□□□ -0.19
TMEM116-218ENST00000552839 FAM198AQ9UFP1 575 aa13.87□□□□□ -0.19
TMEM116-218ENST00000552839 MYH2Q9UKX2 1941 aa13.87□□□□□ -0.19
TMEM116-218ENST00000552839 A0A1B0GUL7 405 aa13.86□□□□□ -0.19
TMEM116-218ENST00000552839 PRDX5P30044 214 aa13.86□□□□□ -0.19
TMEM116-218ENST00000552839 TNNI3KQ59H18 835 aa13.86□□□□□ -0.19
TMEM116-218ENST00000552839 ZFPM1Q8IX07 1006 aa13.86□□□□□ -0.19
TMEM116-218ENST00000552839 STAP2Q9UGK3 403 aa13.86□□□□□ -0.19
TMEM116-218ENST00000552839 FPGT-TNNI3KV9GXZ4 949 aa13.86□□□□□ -0.19
TMEM116-218ENST00000552839 RANBP2P49792 3224 aaKnown RBP13.86□□□□□ -0.19
TMEM116-218ENST00000552839 A0A0G2JLL6 359 aaPredicted RBP13.85□□□□□ -0.19
TMEM116-218ENST00000552839 PHF20L1A8MW92 1017 aa13.85□□□□□ -0.19
TMEM116-218ENST00000552839 TFRCP02786 760 aaKnown RBP13.85□□□□□ -0.19
TMEM116-218ENST00000552839 INHAP05111 366 aa13.85□□□□□ -0.19
TMEM116-218ENST00000552839 CCDC158Q5M9N0 1113 aa13.85□□□□□ -0.19
TMEM116-218ENST00000552839 TTC39AQ5SRH9 613 aa13.85□□□□□ -0.19
TMEM116-218ENST00000552839 FASTKD5Q7L8L6 764 aaKnown RBP13.85□□□□□ -0.19
TMEM116-218ENST00000552839 PRRT2Q7Z6L0 340 aaPredicted RBP13.85□□□□□ -0.19
TMEM116-218ENST00000552839 PXYLP1Q8TE99 480 aa13.85□□□□□ -0.19
TMEM116-218ENST00000552839 DEFB118Q96PH6 123 aa13.85□□□□□ -0.19
TMEM116-218ENST00000552839 GPR108Q9NPR9 543 aa13.85□□□□□ -0.19
TMEM116-218ENST00000552839 ZHX2Q9Y6X8 837 aa13.85□□□□□ -0.19
TMEM116-218ENST00000552839 DOCK1Q14185 1865 aa13.84□□□□□ -0.19
TMEM116-218ENST00000552839 ATRNL1Q5VV63 1379 aa13.84□□□□□ -0.19
TMEM116-218ENST00000552839 SMARCA5O60264 1052 aaPredicted RBP13.84□□□□□ -0.19
TMEM116-218ENST00000552839 IGHDP01880 384 aa13.84□□□□□ -0.19
TMEM116-218ENST00000552839 PTPRAP18433 802 aa13.84□□□□□ -0.19
TMEM116-218ENST00000552839 IRF5Q13568 498 aa13.84□□□□□ -0.19
TMEM116-218ENST00000552839 GADL1Q6ZQY3 521 aa13.84□□□□□ -0.19
TMEM116-218ENST00000552839 SCYL3Q8IZE3 742 aa13.84□□□□□ -0.19
TMEM116-218ENST00000552839 CCDC8Q9H0W5 538 aaPredicted RBP13.84□□□□□ -0.19
TMEM116-218ENST00000552839 PAK6Q9NQU5 681 aaPredicted RBP13.84□□□□□ -0.19
TMEM116-218ENST00000552839 USP40Q9NVE5 1235 aa13.84□□□□□ -0.19
TMEM116-218ENST00000552839 AFG3L2Q9Y4W6 797 aa13.84□□□□□ -0.19
TMEM116-218ENST00000552839 TNPO2O14787 897 aaKnown RBP13.83□□□□□ -0.2
TMEM116-218ENST00000552839 PAWRQ96IZ0 340 aaKnown RBP13.83□□□□□ -0.2
TMEM116-218ENST00000552839 LNPKQ9C0E8 428 aa13.83□□□□□ -0.2
TMEM116-218ENST00000552839 CRISPLD2Q9H0B8 497 aa13.83□□□□□ -0.2
TMEM116-218ENST00000552839 PICK1Q9NRD5 415 aa13.83□□□□□ -0.2
TMEM116-218ENST00000552839 SLC45A1Q9Y2W3 748 aa13.83□□□□□ -0.2
TMEM116-218ENST00000552839 LDHBP07195 334 aaKnown RBP13.82□□□□□ -0.2
TMEM116-218ENST00000552839 SLURP2P0DP57 97 aa13.82□□□□□ -0.2
TMEM116-218ENST00000552839 CAPN2P17655 700 aa13.82□□□□□ -0.2
TMEM116-218ENST00000552839 TIMM10P62072 90 aa13.82□□□□□ -0.2
TMEM116-218ENST00000552839 SH3BP5LQ7L8J4 393 aa13.82□□□□□ -0.2
TMEM116-218ENST00000552839 SMC5Q8IY18 1101 aa13.82□□□□□ -0.2
TMEM116-218ENST00000552839 DIS3LQ8TF46 1054 aaKnown RBP13.82□□□□□ -0.2
TMEM116-218ENST00000552839 XAGE2Q96GT9 111 aa13.82□□□□□ -0.2
TMEM116-218ENST00000552839 TAOK2Q9UL54 1235 aa13.82□□□□□ -0.2
TMEM116-218ENST00000552839 GTF3C3Q9Y5Q9 886 aa13.82□□□□□ -0.2
TMEM116-218ENST00000552839 UQCRFS1P1P0C7P4 283 aa13.81□□□□□ -0.2
TMEM116-218ENST00000552839 ADORA1P30542 326 aa13.81□□□□□ -0.2
TMEM116-218ENST00000552839 RGS3P49796 1198 aa13.81□□□□□ -0.2
TMEM116-218ENST00000552839 MAP3K10Q02779 954 aa13.81□□□□□ -0.2
TMEM116-218ENST00000552839 CHD1LQ86WJ1 897 aa13.81□□□□□ -0.2
TMEM116-218ENST00000552839 SMCR8Q8TEV9 937 aaPredicted RBP13.81□□□□□ -0.2
TMEM116-218ENST00000552839 GDF15Q99988 308 aa13.81□□□□□ -0.2
TMEM116-218ENST00000552839 DBNDD2Q9BQY9 259 aa13.81□□□□□ -0.2
TMEM116-218ENST00000552839 IDI2Q9BXS1 227 aa13.81□□□□□ -0.2
TMEM116-218ENST00000552839 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.81□□□□□ -0.2
TMEM116-218ENST00000552839 COL6A3P12111 3177 aa13.81□□□□□ -0.2
TMEM116-218ENST00000552839 DDTLA6NHG4 134 aaPredicted RBP13.8□□□□□ -0.2
TMEM116-218ENST00000552839 ERC2O15083 957 aa13.8□□□□□ -0.2
TMEM116-218ENST00000552839 ENTPD3O75355 529 aa13.8□□□□□ -0.2
TMEM116-218ENST00000552839 BMP8BP34820 402 aa13.8□□□□□ -0.2
TMEM116-218ENST00000552839 NUCB1Q02818 461 aa13.8□□□□□ -0.2
TMEM116-218ENST00000552839 NECAB2Q7Z6G3 386 aa13.8□□□□□ -0.2
TMEM116-218ENST00000552839 CCDC84Q86UT8 332 aaPredicted RBP13.8□□□□□ -0.2
TMEM116-218ENST00000552839 ANKRD13CQ8N6S4 541 aa13.8□□□□□ -0.2
TMEM116-218ENST00000552839 COA7Q96BR5 231 aa13.8□□□□□ -0.2
TMEM116-218ENST00000552839 EAF2Q96CJ1 260 aaPredicted RBP13.8□□□□□ -0.2
TMEM116-218ENST00000552839 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.8□□□□□ -0.2
TMEM116-218ENST00000552839 SALL1Q9NSC2 1324 aa13.8□□□□□ -0.2
TMEM116-218ENST00000552839 DDX60LQ5H9U9 1706 aaKnown RBP13.79□□□□□ -0.2
TMEM116-218ENST00000552839 PLXNB2O15031 1838 aa13.79□□□□□ -0.2
TMEM116-218ENST00000552839 ATAD5Q96QE3 1844 aa13.79□□□□□ -0.2
TMEM116-218ENST00000552839 TRIM75PA6NK02 468 aa13.79□□□□□ -0.2
TMEM116-218ENST00000552839 CTNND1O60716 968 aaKnown RBP13.79□□□□□ -0.2
TMEM116-218ENST00000552839 MX1P20591 662 aa13.79□□□□□ -0.2
TMEM116-218ENST00000552839 CCDC102BQ68D86 513 aa13.79□□□□□ -0.2
TMEM116-218ENST00000552839 ZSCAN29Q8IWY8 852 aaPredicted RBP13.79□□□□□ -0.2
TMEM116-218ENST00000552839 C7orf61Q8IZ16 206 aa13.79□□□□□ -0.2
TMEM116-218ENST00000552839 DDX4Q9NQI0 724 aaKnown RBP13.79□□□□□ -0.2
TMEM116-218ENST00000552839 TLR7Q9NYK1 1049 aaKnown RBP13.79□□□□□ -0.2
TMEM116-218ENST00000552839 DBNLQ9UJU6 430 aaKnown RBP13.79□□□□□ -0.2
TMEM116-218ENST00000552839 ZMYND8Q9ULU4 1186 aaPredicted RBP13.79□□□□□ -0.2
TMEM116-218ENST00000552839 AGTPBP1Q9UPW5 1226 aa13.79□□□□□ -0.2
TMEM116-218ENST00000552839 RFX7Q2KHR2 1363 aa13.79□□□□□ -0.2
TMEM116-218ENST00000552839 LOC285556D6RIA3 1793 aa13.78□□□□□ -0.2
TMEM116-218ENST00000552839 PHKA1P46020 1223 aa13.78□□□□□ -0.2
TMEM116-218ENST00000552839 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
TMEM116-218ENST00000552839 FAM110CQ1W6H9 321 aa13.78□□□□□ -0.2
TMEM116-218ENST00000552839 TREML2Q5T2D2 321 aa13.78□□□□□ -0.2
TMEM116-218ENST00000552839 GPR153Q6NV75 609 aa13.78□□□□□ -0.2
TMEM116-218ENST00000552839 ECHDC1Q9NTX5 307 aa13.78□□□□□ -0.2
TMEM116-218ENST00000552839 DENND2AQ9ULE3 1009 aa13.78□□□□□ -0.2
TMEM116-218ENST00000552839 GAKO14976 1311 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms