RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 ZBTB38Q8NAP3 1195 aaPredicted RBP11.8□□□□□ -0.52
ERBB3-214ENST00000550070 TMEM87BQ96K49 555 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 ATRNO75882 1429 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 TNS3Q68CZ2 1445 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 ARHGAP6O43182 974 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 TRIM29Q14134 588 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 UBE3CQ15386 1083 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 CCDC125Q86Z20 511 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 MNS1Q8NEH6 495 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 SLC26A6Q9BXS9 759 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 GREM2Q9H772 168 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 SLAIN2Q9P270 581 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 WWC3Q9ULE0 1092 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 TACC3Q9Y6A5 838 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 ZSCAN12O43309 604 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 MYO1BO43795 1136 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 PRR29P0C7W0 189 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 ITGA6P23229 1130 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 TOB1P50616 345 aaPredicted RBP11.79□□□□□ -0.52
ERBB3-214ENST00000550070 FMR1Q06787 632 aaKnown RBP eCLIP11.79□□□□□ -0.52
ERBB3-214ENST00000550070 NKX1-1Q15270 411 aaPredicted RBP11.79□□□□□ -0.52
ERBB3-214ENST00000550070 TMEM67Q5HYA8 995 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 TOM1L2Q6ZVM7 507 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 SGMS1Q86VZ5 419 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 KRI1Q8N9T8 703 aaKnown RBP11.79□□□□□ -0.52
ERBB3-214ENST00000550070 NOL10Q9BSC4 688 aaKnown RBP11.79□□□□□ -0.52
ERBB3-214ENST00000550070 SRRTQ9BXP5 876 aaKnown RBP11.79□□□□□ -0.52
ERBB3-214ENST00000550070 EPC1Q9H2F5 836 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 MAN1B1Q9UKM7 699 aa11.79□□□□□ -0.52
ERBB3-214ENST00000550070 TCRBV5S4A2TA0A5A2 114 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 BTBD18B2RXH4 712 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 PDE6AP16499 860 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 GUCY1A2P33402 732 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 SSRP1Q08945 709 aaKnown RBP11.78□□□□□ -0.52
ERBB3-214ENST00000550070 CCDC96Q2M329 555 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 TAF3Q5VWG9 929 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 PDILTQ8N807 584 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 TTLL11Q8NHH1 800 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 ZNF512BQ96KM6 892 aaPredicted RBP11.78□□□□□ -0.52
ERBB3-214ENST00000550070 WDR24Q96S15 920 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 STRBPQ96SI9 672 aaKnown RBP11.78□□□□□ -0.52
ERBB3-214ENST00000550070 BAG1Q99933 345 aaPredicted RBP11.78□□□□□ -0.52
ERBB3-214ENST00000550070 ZSWIM5Q9P217 1185 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 TNS2Q63HR2 1409 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 SPATA31A3Q5VYP0 1347 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 EFCAB8A8MWE9 144 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 SEC31AO94979 1220 aaKnown RBP11.78□□□□□ -0.52
ERBB3-214ENST00000550070 ADKP55263 362 aaKnown RBP11.78□□□□□ -0.52
ERBB3-214ENST00000550070 CTDSPL2Q05D32 466 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 TTF1Q15361 905 aaPredicted RBP11.78□□□□□ -0.52
ERBB3-214ENST00000550070 TMCO3Q6UWJ1 677 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 NOSTRINQ8IVI9 506 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 VGLL2Q8N8G2 317 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 TC2NQ8N9U0 490 aa11.78□□□□□ -0.52
ERBB3-214ENST00000550070 ERICH4A6NGS2 130 aa11.77□□□□□ -0.52
ERBB3-214ENST00000550070 FMNL1O95466 1100 aaPredicted RBP11.77□□□□□ -0.52
ERBB3-214ENST00000550070 PHKA1P46020 1223 aa11.77□□□□□ -0.52
ERBB3-214ENST00000550070 POSTNQ15063 836 aa11.77□□□□□ -0.52
ERBB3-214ENST00000550070 ZNF827Q17R98 1081 aa11.77□□□□□ -0.52
ERBB3-214ENST00000550070 TOGARAM2Q6ZUX3 1019 aa11.77□□□□□ -0.52
ERBB3-214ENST00000550070 ELOA2Q8IYF1 753 aaPredicted RBP11.77□□□□□ -0.52
ERBB3-214ENST00000550070 MED15Q96RN5 788 aa11.77□□□□□ -0.52
ERBB3-214ENST00000550070 EPB41L4AQ9HCS5 686 aaPredicted RBP11.77□□□□□ -0.52
ERBB3-214ENST00000550070 CNNM1Q9NRU3 951 aa11.77□□□□□ -0.52
ERBB3-214ENST00000550070 ARGLU1Q9NWB6 273 aaPredicted RBP11.77□□□□□ -0.52
ERBB3-214ENST00000550070 SERTAD1Q9UHV2 236 aa11.77□□□□□ -0.52
ERBB3-214ENST00000550070 KCNJ14Q9UNX9 436 aa11.77□□□□□ -0.52
ERBB3-214ENST00000550070 NFE2L3Q9Y4A8 694 aa11.77□□□□□ -0.52
ERBB3-214ENST00000550070 WDR17Q8IZU2 1322 aa11.77□□□□□ -0.53
ERBB3-214ENST00000550070 IFIT3O14879 490 aaKnown RBP11.77□□□□□ -0.53
ERBB3-214ENST00000550070 POLR2DO15514 142 aaKnown RBP11.77□□□□□ -0.53
ERBB3-214ENST00000550070 ZNF18P17022 549 aa11.77□□□□□ -0.53
ERBB3-214ENST00000550070 GPTP24298 496 aa11.77□□□□□ -0.53
ERBB3-214ENST00000550070 SARSP49591 514 aaKnown RBP11.77□□□□□ -0.53
ERBB3-214ENST00000550070 HLFQ16534 295 aa11.77□□□□□ -0.53
ERBB3-214ENST00000550070 TRMT44Q8IYL2 757 aaKnown RBP11.77□□□□□ -0.53
ERBB3-214ENST00000550070 GRAMD1CQ8IYS0 662 aa11.77□□□□□ -0.53
ERBB3-214ENST00000550070 MPHOSPH8Q99549 860 aa11.77□□□□□ -0.53
ERBB3-214ENST00000550070 FBXO2Q9UK22 296 aaPredicted RBP11.77□□□□□ -0.53
ERBB3-214ENST00000550070 SLC12A7Q9Y666 1083 aa11.77□□□□□ -0.53
ERBB3-214ENST00000550070 STK36Q9NRP7 1315 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 MMP1P03956 469 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 PTPREP23469 700 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 CASQ1P31415 396 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 LIFRP42702 1097 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 GNG11P61952 73 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 MAP3K9P80192 1104 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 NT5DC1Q5TFE4 455 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 KIF6Q6ZMV9 814 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 DNAJC10Q8IXB1 793 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 OTUD6BQ8N6M0 293 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 AIDAQ96BJ3 306 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 STX10O60499 249 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 IFNAR1P17181 557 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 MORC3Q14149 939 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 SPECC1LQ69YQ0 1117 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 ARMCX6Q7L4S7 300 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 DIS3L2Q8IYB7 885 aaKnown RBP11.76□□□□□ -0.53
ERBB3-214ENST00000550070 IFNL3Q8IZI9 196 aa11.76□□□□□ -0.53
ERBB3-214ENST00000550070 SEC31BQ9NQW1 1179 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms