RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 PHAXQ9H814 394 aaKnown RBP8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 CPA4Q9UI42 421 aa8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 PNMA3Q9UL41 463 aa8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 TNNQ9UQP3 1299 aa8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 RIPOR2Q9Y4F9 1068 aa8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 MYPNQ86TC9 1320 aa8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 TLR2O60603 784 aa8.75□□□□□ -1.01
DEPDC4-208ENST00000549341 GJB1P08034 283 aa8.75□□□□□ -1.01
DEPDC4-208ENST00000549341 PSMC4P43686 418 aa8.75□□□□□ -1.01
DEPDC4-208ENST00000549341 TNFAIP1Q13829 316 aa8.75□□□□□ -1.01
DEPDC4-208ENST00000549341 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.75□□□□□ -1.01
DEPDC4-208ENST00000549341 UBE2Q1Q7Z7E8 422 aa8.75□□□□□ -1.01
DEPDC4-208ENST00000549341 RPAP2Q8IXW5 612 aaPredicted RBP8.75□□□□□ -1.01
DEPDC4-208ENST00000549341 CCDC191Q8NCU4 936 aa8.75□□□□□ -1.01
DEPDC4-208ENST00000549341 U2AF1L4Q8WU68 220 aaKnown RBP8.75□□□□□ -1.01
DEPDC4-208ENST00000549341 PRMT6Q96LA8 375 aaPredicted RBP8.75□□□□□ -1.01
DEPDC4-208ENST00000549341 TRIM47Q96LD4 638 aa8.75□□□□□ -1.01
DEPDC4-208ENST00000549341 LEMD3Q9Y2U8 911 aa8.75□□□□□ -1.01
DEPDC4-208ENST00000549341 TCP10L2B9ZVM9 353 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 BTBD19C9JJ37 291 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 SNAP23O00161 211 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 RNF40O75150 1001 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 GNRH1P01148 92 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 GNAI2P04899 355 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 CETPP11597 493 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 OSBPP22059 807 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 CTGFP29279 349 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 PRMT2P55345 433 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 UBXN2AP68543 259 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 PRKCZQ05513 592 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 NEXNQ0ZGT2 675 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 C7orf61Q8IZ16 206 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 MTMR14Q8NCE2 650 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 DNAAF4Q8WXU2 420 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 MPHOSPH8Q99549 860 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 SRCIN1Q9C0H9 1055 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 TMEM39BQ9GZU3 492 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 ANKRD2Q9GZV1 360 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 UNC93B1Q9H1C4 597 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 CD209Q9NNX6 404 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 SRRDQ9UH36 339 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 ZMYND8Q9ULU4 1186 aaPredicted RBP8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 STXBP5LQ9Y2K9 1186 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 PCDHB15Q9Y5E8 787 aa8.74□□□□□ -1.01
DEPDC4-208ENST00000549341 PSME4Q14997 1843 aa8.73□□□□□ -1.01
DEPDC4-208ENST00000549341 SPDYE5A6NIY4 337 aa8.73□□□□□ -1.01
DEPDC4-208ENST00000549341 SLC4A3P48751 1232 aa8.73□□□□□ -1.01
DEPDC4-208ENST00000549341 SNAPC2Q13487 334 aa8.73□□□□□ -1.01
DEPDC4-208ENST00000549341 G2E3Q7L622 706 aa8.73□□□□□ -1.01
DEPDC4-208ENST00000549341 ZNF804AQ7Z570 1209 aa8.73□□□□□ -1.01
DEPDC4-208ENST00000549341 TTLL11Q8NHH1 800 aa8.73□□□□□ -1.01
DEPDC4-208ENST00000549341 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.73□□□□□ -1.01
DEPDC4-208ENST00000549341 WRNIP1Q96S55 665 aa8.73□□□□□ -1.01
DEPDC4-208ENST00000549341 TDRD3Q9H7E2 651 aaKnown RBP8.73□□□□□ -1.01
DEPDC4-208ENST00000549341 ZNF70Q9UC06 446 aaPredicted RBP8.73□□□□□ -1.01
DEPDC4-208ENST00000549341 IRF6O14896 467 aa8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 TAF5LO75529 589 aa8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 ALDH1L1O75891 902 aa8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 IGHDP01880 384 aa8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 UBTFL1P0CB47 393 aaPredicted RBP8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 ITGA6P23229 1130 aa8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 HOXD10P28358 340 aa8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 CHRNDQ07001 517 aa8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 KSR2Q6VAB6 950 aa8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 UBE3BQ7Z3V4 1068 aa8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 HELBQ8NG08 1087 aaPredicted RBP8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 METTL22Q9BUU2 404 aaPredicted RBP8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 FAM198AQ9UFP1 575 aa8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 MAP3K2Q9Y2U5 619 aa8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 SNCAIPQ9Y6H5 919 aa8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 ZSWIM8A7E2V4 1837 aa8.72□□□□□ -1.01
DEPDC4-208ENST00000549341 PI4KAP2A4QPH2 592 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 F6X3S4 739 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 PDHXO00330 501 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 EIF5BO60841 1220 aaKnown RBP8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 DGAT1O75907 488 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 TFRCP02786 760 aaKnown RBP8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 INHAP05111 366 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 ELNP15502 786 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 SYN1P17600 705 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 CACNB3P54284 484 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 FCGRTP55899 365 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 CWF19L2Q2TBE0 894 aaKnown RBP8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 PKDCCQ504Y2 493 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 SLF2Q8IX21 1173 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 ANKRD44Q8N8A2 993 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 PI4KAP1Q8N8J0 262 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 DIS3LQ8TF46 1054 aaKnown RBP8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 ZKSCAN4Q969J2 545 aaPredicted RBP8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 TEPSINQ96N21 525 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 DEFB118Q96PH6 123 aa8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 TTF2Q9UNY4 1162 aaKnown RBP8.71□□□□□ -1.02
DEPDC4-208ENST00000549341 OTOFQ9HC10 1997 aa8.7□□□□□ -1.02
DEPDC4-208ENST00000549341 TNNI2P48788 182 aa8.7□□□□□ -1.02
DEPDC4-208ENST00000549341 MFSD14BQ5SR56 506 aa8.7□□□□□ -1.02
DEPDC4-208ENST00000549341 C17orf99Q6UX52 265 aa8.7□□□□□ -1.02
DEPDC4-208ENST00000549341 NUDT18Q6ZVK8 323 aa8.7□□□□□ -1.02
DEPDC4-208ENST00000549341 ERO1BQ86YB8 467 aa8.7□□□□□ -1.02
DEPDC4-208ENST00000549341 SMC5Q8IY18 1101 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms