RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 DDX19AQ9NUU7 478 aaKnown RBP14.31□□□□□ -0.12
CHD7-211ENST00000532149 RCOR1Q9UKL0 485 aa14.31□□□□□ -0.12
CHD7-211ENST00000532149 HPS5Q9UPZ3 1129 aa14.31□□□□□ -0.12
CHD7-211ENST00000532149 CNPY2Q9Y2B0 182 aa14.31□□□□□ -0.12
CHD7-211ENST00000532149 LRRC37AA6NMS7 1700 aa14.3□□□□□ -0.12
CHD7-211ENST00000532149 TAF1P21675 1872 aa14.3□□□□□ -0.12
CHD7-211ENST00000532149 CTAGE5O15320 804 aa14.3□□□□□ -0.12
CHD7-211ENST00000532149 KDM4AO75164 1064 aa14.3□□□□□ -0.12
CHD7-211ENST00000532149 UFL1O94874 794 aa14.3□□□□□ -0.12
CHD7-211ENST00000532149 CCT2P78371 535 aaKnown RBP14.3□□□□□ -0.12
CHD7-211ENST00000532149 CD209Q9NNX6 404 aa14.3□□□□□ -0.12
CHD7-211ENST00000532149 NSFL1CQ9UNZ2 370 aaKnown RBP14.3□□□□□ -0.12
CHD7-211ENST00000532149 PPEF1O14829 653 aaPredicted RBP14.29□□□□□ -0.12
CHD7-211ENST00000532149 FIBPO43427 364 aa14.29□□□□□ -0.12
CHD7-211ENST00000532149 JAK2O60674 1132 aa14.29□□□□□ -0.12
CHD7-211ENST00000532149 DDAH1O94760 285 aa14.29□□□□□ -0.12
CHD7-211ENST00000532149 YEATS4O95619 227 aa14.29□□□□□ -0.12
CHD7-211ENST00000532149 SRGNP10124 158 aa14.29□□□□□ -0.12
CHD7-211ENST00000532149 XRCC6P12956 609 aaKnown RBP eCLIP14.29□□□□□ -0.12
CHD7-211ENST00000532149 FKBP1AP62942 108 aaKnown RBP14.29□□□□□ -0.12
CHD7-211ENST00000532149 SSRP1Q08945 709 aaKnown RBP14.29□□□□□ -0.12
CHD7-211ENST00000532149 SAFBQ15424 915 aaKnown RBP eCLIP14.29□□□□□ -0.12
CHD7-211ENST00000532149 STYK1Q6J9G0 422 aa14.29□□□□□ -0.12
CHD7-211ENST00000532149 CYB5R4Q7L1T6 521 aa14.29□□□□□ -0.12
CHD7-211ENST00000532149 CATIPQ7Z7H3 387 aa14.29□□□□□ -0.12
CHD7-211ENST00000532149 JMYQ8N9B5 988 aa14.29□□□□□ -0.12
CHD7-211ENST00000532149 MIGA1Q8NAN2 632 aa14.29□□□□□ -0.12
CHD7-211ENST00000532149 KCNG4Q8TDN1 519 aa14.29□□□□□ -0.12
CHD7-211ENST00000532149 MRIQ9BWK5 157 aa14.29□□□□□ -0.12
CHD7-211ENST00000532149 BRPF3Q9ULD4 1205 aa14.29□□□□□ -0.12
CHD7-211ENST00000532149 COL1A1P02452 1464 aaPredicted RBP14.29□□□□□ -0.12
CHD7-211ENST00000532149 QSER1Q2KHR3 1735 aa14.29□□□□□ -0.12
CHD7-211ENST00000532149 GOLGA8AA7E2F4 631 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 DEXIO95424 95 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 NEDD4P46934 1319 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 GPSM2P81274 684 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 DDR1Q08345 913 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 CCDC173Q0VFZ6 552 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 PPP4R3BQ5MIZ7 849 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 CHST3Q7LGC8 479 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 TBC1D16Q8TBP0 767 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 LEO1Q8WVC0 666 aaPredicted RBP14.28□□□□□ -0.12
CHD7-211ENST00000532149 DDX11Q96FC9 970 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 ZC3H12CQ9C0D7 883 aaKnown RBP14.28□□□□□ -0.12
CHD7-211ENST00000532149 TSPY26PQ9H489 355 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 DCP1AQ9NPI6 582 aaPredicted RBP14.28□□□□□ -0.12
CHD7-211ENST00000532149 TCP11L1Q9NUJ3 509 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 POLR3EQ9NVU0 708 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 RTEL1Q9NZ71 1219 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 TMEM63CQ9P1W3 806 aa14.28□□□□□ -0.12
CHD7-211ENST00000532149 ROBO3Q96MS0 1386 aa14.27□□□□□ -0.12
CHD7-211ENST00000532149 MROH7-TTC4A0A0A0MT08 1334 aa14.27□□□□□ -0.12
CHD7-211ENST00000532149 MINDY4BA8MYZ0 360 aa14.27□□□□□ -0.13
CHD7-211ENST00000532149 FMNL1O95466 1100 aaPredicted RBP14.27□□□□□ -0.13
CHD7-211ENST00000532149 NASPP49321 788 aaPredicted RBP14.27□□□□□ -0.13
CHD7-211ENST00000532149 GNAQP50148 359 aa14.27□□□□□ -0.13
CHD7-211ENST00000532149 AKAP17AQ02040 695 aaKnown RBP14.27□□□□□ -0.13
CHD7-211ENST00000532149 CHAF1AQ13111 956 aaPredicted RBP14.27□□□□□ -0.13
CHD7-211ENST00000532149 RTN1Q16799 776 aa14.27□□□□□ -0.13
CHD7-211ENST00000532149 CTR9Q6PD62 1173 aa14.27□□□□□ -0.13
CHD7-211ENST00000532149 DGKHQ86XP1 1220 aa14.27□□□□□ -0.13
CHD7-211ENST00000532149 ANKS1AQ92625 1134 aa14.27□□□□□ -0.13
CHD7-211ENST00000532149 ZSCAN10Q96SZ4 725 aaPredicted RBP14.27□□□□□ -0.13
CHD7-211ENST00000532149 RNF26Q9BY78 433 aaPredicted RBP14.27□□□□□ -0.13
CHD7-211ENST00000532149 TOMM22Q9NS69 142 aa14.27□□□□□ -0.13
CHD7-211ENST00000532149 IQSEC3Q9UPP2 1182 aaPredicted RBP14.27□□□□□ -0.13
CHD7-211ENST00000532149 MORC2Q9Y6X9 1032 aaPredicted RBP14.27□□□□□ -0.13
CHD7-211ENST00000532149 GPR75-ASB3A0A0A6YYF3 556 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 A0A1W2PQ27 194 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 A0A1W2PQ64 194 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 A0A1W2PQD8 194 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 PRKAB2O43741 272 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 FDPSP14324 419 aaKnown RBP14.26□□□□□ -0.13
CHD7-211ENST00000532149 KIF5BP33176 963 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 USP5P45974 858 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 CTDSPL2Q05D32 466 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 HS1BP3Q53T59 392 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 IFIT1BQ5T764 474 aaKnown RBP14.26□□□□□ -0.13
CHD7-211ENST00000532149 PODNQ7Z5L7 613 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 ADGRA1Q86SQ6 560 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 COL23A1Q86Y22 540 aaPredicted RBP14.26□□□□□ -0.13
CHD7-211ENST00000532149 MPNDQ8N594 471 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 FANCBQ8NB91 859 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 SUPT20HQ8NEM7 779 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 SPOCK2Q92563 424 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 CNKSR1Q969H4 720 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.26□□□□□ -0.13
CHD7-211ENST00000532149 COL4A1P02462 1669 aa14.26□□□□□ -0.13
CHD7-211ENST00000532149 LAMB1P07942 1786 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 A0A0G2JLW4 131 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 USP17L12C9JPN9 530 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 USP17L21D6R901 530 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 H0YIN7 160 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 C6orf229H3BNL8 230 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 CCDC192P0DO97 292 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 PRDX5P30044 214 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 COL9A3Q14050 684 aaPredicted RBP14.25□□□□□ -0.13
CHD7-211ENST00000532149 SEC23AQ15436 765 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 NTRK3Q16288 839 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 C12orf60Q5U649 245 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms