RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 ATRNL1Q5VV63 1379 aa20.95■□□□□ 0.94
CTSB-222ENST00000531551 FAM196BA6NMK8 535 aa20.95■□□□□ 0.94
CTSB-222ENST00000531551 TBC1D10CQ8IV04 446 aa20.95■□□□□ 0.94
CTSB-222ENST00000531551 RASEFQ8IZ41 740 aa20.95■□□□□ 0.94
CTSB-222ENST00000531551 TEPSINQ96N21 525 aa20.95■□□□□ 0.94
CTSB-222ENST00000531551 CDK5RAP2Q96SN8 1893 aa20.95■□□□□ 0.94
CTSB-222ENST00000531551 NBPF3Q9H094 633 aa20.94■□□□□ 0.94
CTSB-222ENST00000531551 ANAPC4Q9UJX5 808 aa20.94■□□□□ 0.94
CTSB-222ENST00000531551 BAZ2AQ9UIF9 1905 aaKnown RBP20.94■□□□□ 0.94
CTSB-222ENST00000531551 PRDM1O75626 825 aa20.94■□□□□ 0.94
CTSB-222ENST00000531551 RRP12Q5JTH9 1297 aaKnown RBP20.94■□□□□ 0.94
CTSB-222ENST00000531551 MFSD6Q6ZSS7 791 aa20.94■□□□□ 0.94
CTSB-222ENST00000531551 SLC44A5Q8NCS7 719 aa20.94■□□□□ 0.94
CTSB-222ENST00000531551 MKNK2Q9HBH9 465 aa20.94■□□□□ 0.94
CTSB-222ENST00000531551 SNX14Q9Y5W7 946 aa20.94■□□□□ 0.94
CTSB-222ENST00000531551 PDE4BQ07343 736 aa20.93■□□□□ 0.94
CTSB-222ENST00000531551 AKNAD1Q5T1N1 836 aa20.93■□□□□ 0.94
CTSB-222ENST00000531551 FOXP4Q8IVH2 680 aaPredicted RBP20.93■□□□□ 0.94
CTSB-222ENST00000531551 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.93■□□□□ 0.943e-7■□□□□ 9.8
CTSB-222ENST00000531551 FOCADQ5VW36 1801 aa20.93■□□□□ 0.94
CTSB-222ENST00000531551 COL2A1P02458 1487 aaPredicted RBP20.93■□□□□ 0.94
CTSB-222ENST00000531551 E7EWF7 191 aa20.92■□□□□ 0.94
CTSB-222ENST00000531551 KIF3CO14782 793 aa20.92■□□□□ 0.94
CTSB-222ENST00000531551 SUPT20HL1Q3ZLR7 823 aa20.92■□□□□ 0.94
CTSB-222ENST00000531551 ZNF784Q8NCA9 323 aaPredicted RBP20.92■□□□□ 0.94
CTSB-222ENST00000531551 EHD4Q9H223 541 aa20.92■□□□□ 0.94
CTSB-222ENST00000531551 RNF41Q9H4P4 317 aaPredicted RBP20.92■□□□□ 0.94
CTSB-222ENST00000531551 TRAF5O00463 557 aa20.92■□□□□ 0.94
CTSB-222ENST00000531551 CDK8P49336 464 aa20.92■□□□□ 0.94
CTSB-222ENST00000531551 PRKG1Q13976 671 aa20.92■□□□□ 0.94
CTSB-222ENST00000531551 CHADLQ6NUI6 762 aa20.92■□□□□ 0.94
CTSB-222ENST00000531551 C16orf86Q6ZW13 317 aa20.92■□□□□ 0.94
CTSB-222ENST00000531551 STAG1Q8WVM7 1258 aa20.92■□□□□ 0.94
CTSB-222ENST00000531551 CDCA5Q96FF9 252 aa20.92■□□□□ 0.94
CTSB-222ENST00000531551 TACC3Q9Y6A5 838 aa20.92■□□□□ 0.94
CTSB-222ENST00000531551 TRDNQ13061 729 aa20.91■□□□□ 0.94
CTSB-222ENST00000531551 STOX1Q6ZVD7 989 aa20.91■□□□□ 0.94
CTSB-222ENST00000531551 ZNF408Q9H9D4 720 aa20.91■□□□□ 0.94
CTSB-222ENST00000531551 MYH1P12882 1939 aa20.91■□□□□ 0.94
CTSB-222ENST00000531551 NEDD4P46934 1319 aa20.91■□□□□ 0.94
CTSB-222ENST00000531551 DDX60LQ5H9U9 1706 aaKnown RBP20.9■□□□□ 0.94
CTSB-222ENST00000531551 GABPAQ06546 454 aa20.9■□□□□ 0.94
CTSB-222ENST00000531551 ADCK5Q3MIX3 580 aa20.9■□□□□ 0.94
CTSB-222ENST00000531551 HOOK2Q96ED9 719 aa20.9■□□□□ 0.94
CTSB-222ENST00000531551 TBC1D32Q96NH3 1257 aa20.9■□□□□ 0.94
CTSB-222ENST00000531551 DNAJC18Q9H819 358 aa20.9■□□□□ 0.94
CTSB-222ENST00000531551 ZNF287Q9HBT7 754 aa20.9■□□□□ 0.94
CTSB-222ENST00000531551 SWAP70Q9UH65 585 aa20.9■□□□□ 0.94
CTSB-222ENST00000531551 HERC5Q9UII4 1024 aaKnown RBP20.9■□□□□ 0.94
CTSB-222ENST00000531551 FZD1Q9UP38 647 aa20.9■□□□□ 0.94
CTSB-222ENST00000531551 ROBO3Q96MS0 1386 aa20.9■□□□□ 0.94
CTSB-222ENST00000531551 FMR1Q06787 632 aaKnown RBP eCLIP20.9■□□□□ 0.94
CTSB-222ENST00000531551 KRT32Q14532 448 aa20.9■□□□□ 0.94
CTSB-222ENST00000531551 RALYLQ86SE5 291 aaKnown RBP20.9■□□□□ 0.94
CTSB-222ENST00000531551 ZNF444Q8N0Y2 327 aaPredicted RBP20.9■□□□□ 0.94
CTSB-222ENST00000531551 KCNB2Q92953 911 aa20.9■□□□□ 0.94
CTSB-222ENST00000531551 JAKMIP1Q96N16 626 aaKnown RBP20.9■□□□□ 0.94
CTSB-222ENST00000531551 RANBP6O60518 1105 aaKnown RBP20.89■□□□□ 0.93
CTSB-222ENST00000531551 NF2P35240 595 aa20.89■□□□□ 0.93
CTSB-222ENST00000531551 RBM25P49756 843 aaKnown RBP20.89■□□□□ 0.93
CTSB-222ENST00000531551 DCAF15Q66K64 600 aa20.89■□□□□ 0.93
CTSB-222ENST00000531551 B4E1Z4 1266 aa20.88■□□□□ 0.93
CTSB-222ENST00000531551 NCOA7Q8NI08 942 aa20.88■□□□□ 0.93
CTSB-222ENST00000531551 NEK1Q96PY6 1258 aa20.88■□□□□ 0.93
CTSB-222ENST00000531551 TBC1D12O60347 775 aa20.88■□□□□ 0.93
CTSB-222ENST00000531551 SHMT1P34896 483 aa20.88■□□□□ 0.93
CTSB-222ENST00000531551 ANAPC15P60006 121 aa20.88■□□□□ 0.93
CTSB-222ENST00000531551 TTLL12Q14166 644 aaPredicted RBP20.88■□□□□ 0.93
CTSB-222ENST00000531551 TSGA10IPQ3SY00 556 aa20.88■□□□□ 0.93
CTSB-222ENST00000531551 FAM47AQ5JRC9 791 aa20.88■□□□□ 0.93
CTSB-222ENST00000531551 METTL16Q86W50 562 aaKnown RBP20.88■□□□□ 0.93
CTSB-222ENST00000531551 KRT23Q9C075 422 aa20.88■□□□□ 0.93
CTSB-222ENST00000531551 CNNM2Q9H8M5 875 aa20.88■□□□□ 0.93
CTSB-222ENST00000531551 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.88■□□□□ 0.936e-6■■□□□ 13.9
CTSB-222ENST00000531551 MPHOSPH10O00566 681 aaKnown RBP20.87■□□□□ 0.93
CTSB-222ENST00000531551 PCP11498 1178 aaKnown RBP20.87■□□□□ 0.93
CTSB-222ENST00000531551 ZNF341Q9BYN7 854 aa20.87■□□□□ 0.93
CTSB-222ENST00000531551 POLR2AP24928 1970 aaKnown RBP20.87■□□□□ 0.93
CTSB-222ENST00000531551 TSPY2A6NKD2 308 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 KDM4AO75164 1064 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 GDF11O95390 407 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 CASTP20810 708 aaKnown RBP20.86■□□□□ 0.93
CTSB-222ENST00000531551 RASA1P20936 1047 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 PSMA5P28066 241 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 CERKLQ49MI3 558 aaPredicted RBP20.86■□□□□ 0.93
CTSB-222ENST00000531551 ESR2Q92731 530 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.86■□□□□ 0.93
CTSB-222ENST00000531551 LAMB1P07942 1786 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 ORC4O43929 436 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 PPP1R12BO60237 982 aaPredicted RBP20.86■□□□□ 0.93
CTSB-222ENST00000531551 FGRP09769 529 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 TSPY3P0CV98 308 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 TSPY8P0CW00 308 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 CPA1P15085 419 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 TFAP4Q01664 338 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 TATDN1Q6P1N9 297 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 CHST3Q7LGC8 479 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 NKX2-3Q8TAU0 364 aa20.86■□□□□ 0.93
CTSB-222ENST00000531551 TOMM70O94826 608 aa20.85■□□□□ 0.93
CTSB-222ENST00000531551 SMC1BQ8NDV3 1235 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms