RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 CDK8P49336 464 aa6□□□□□ -1.45
SKP1-212ENST00000523966 PPM1JQ5JR12 505 aa6□□□□□ -1.45
SKP1-212ENST00000523966 CYFIP1Q7L576 1253 aa6□□□□□ -1.45
SKP1-212ENST00000523966 RNF214Q8ND24 703 aa6□□□□□ -1.45
SKP1-212ENST00000523966 OR6P1Q8NGX9 317 aa6□□□□□ -1.45
SKP1-212ENST00000523966 WFDC12Q8WWY7 111 aa6□□□□□ -1.45
SKP1-212ENST00000523966 FANCD2OSQ96PS1 177 aa6□□□□□ -1.45
SKP1-212ENST00000523966 WNT10AQ9GZT5 417 aa6□□□□□ -1.45
SKP1-212ENST00000523966 PPP1R9AQ9ULJ8 1098 aa6□□□□□ -1.45
SKP1-212ENST00000523966 PPT2Q9UMR5 302 aa6□□□□□ -1.45
SKP1-212ENST00000523966 IGSF3O75054 1194 aa5.99□□□□□ -1.45
SKP1-212ENST00000523966 HTR3BO95264 441 aa5.99□□□□□ -1.45
SKP1-212ENST00000523966 FGRP09769 529 aa5.99□□□□□ -1.45
SKP1-212ENST00000523966 GRK4P32298 578 aa5.99□□□□□ -1.45
SKP1-212ENST00000523966 CHMP4BP1P59074 171 aa5.99□□□□□ -1.45
SKP1-212ENST00000523966 CLCQ05315 142 aa5.99□□□□□ -1.45
SKP1-212ENST00000523966 CCDC81Q6ZN84 652 aa5.99□□□□□ -1.45
SKP1-212ENST00000523966 EHMT1Q9H9B1 1298 aa5.99□□□□□ -1.45
SKP1-212ENST00000523966 ADAM30Q9UKF2 790 aa5.99□□□□□ -1.45
SKP1-212ENST00000523966 MRVI1Q9Y6F6 885 aa5.99□□□□□ -1.45
SKP1-212ENST00000523966 U2SURPO15042 1029 aaKnown RBP5.98□□□□□ -1.45
SKP1-212ENST00000523966 ATE1O95260 518 aa5.98□□□□□ -1.45
SKP1-212ENST00000523966 HCLS1P14317 486 aaPredicted RBP5.98□□□□□ -1.45
SKP1-212ENST00000523966 RXRBP28702 533 aa5.98□□□□□ -1.45
SKP1-212ENST00000523966 YARSP54577 528 aaKnown RBP5.98□□□□□ -1.45
SKP1-212ENST00000523966 TNNI3KQ59H18 835 aa5.98□□□□□ -1.45
SKP1-212ENST00000523966 HID1Q8IV36 788 aa5.98□□□□□ -1.45
SKP1-212ENST00000523966 PMFBP1Q8TBY8 1022 aa5.98□□□□□ -1.45
SKP1-212ENST00000523966 DNAJC2Q99543 621 aaKnown RBP5.98□□□□□ -1.45
SKP1-212ENST00000523966 TRIM55Q9BYV6 548 aa5.98□□□□□ -1.45
SKP1-212ENST00000523966 DISC1Q9NRI5 854 aa5.98□□□□□ -1.45
SKP1-212ENST00000523966 PCOLCE2Q9UKZ9 415 aa5.98□□□□□ -1.45
SKP1-212ENST00000523966 POLR3KQ9Y2Y1 108 aaPredicted RBP5.98□□□□□ -1.45
SKP1-212ENST00000523966 PCDHGC5Q9Y5F6 944 aa5.98□□□□□ -1.45
SKP1-212ENST00000523966 CORINQ9Y5Q5 1042 aa5.98□□□□□ -1.45
SKP1-212ENST00000523966 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.97□□□□□ -1.45
SKP1-212ENST00000523966 RAB6AP20340 208 aa5.97□□□□□ -1.45
SKP1-212ENST00000523966 COL8A1P27658 744 aa5.97□□□□□ -1.45
SKP1-212ENST00000523966 NOS3P29474 1203 aa5.97□□□□□ -1.45
SKP1-212ENST00000523966 TTLL4Q14679 1199 aa5.97□□□□□ -1.45
SKP1-212ENST00000523966 ZBTB37Q5TC79 503 aa5.97□□□□□ -1.45
SKP1-212ENST00000523966 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.97□□□□□ -1.45
SKP1-212ENST00000523966 SMYD4Q8IYR2 804 aaPredicted RBP5.97□□□□□ -1.45
SKP1-212ENST00000523966 FAM13CQ8NE31 585 aa5.97□□□□□ -1.45
SKP1-212ENST00000523966 REV1Q9UBZ9 1251 aa5.97□□□□□ -1.45
SKP1-212ENST00000523966 STK17AQ9UEE5 414 aa5.97□□□□□ -1.45
SKP1-212ENST00000523966 KLHL3Q9UH77 587 aa5.97□□□□□ -1.45
SKP1-212ENST00000523966 ZNRF3Q9ULT6 936 aa5.97□□□□□ -1.45
SKP1-212ENST00000523966 PRR36Q9H6K5 1346 aa5.97□□□□□ -1.45
SKP1-212ENST00000523966 TIAF1O95411 115 aa5.96□□□□□ -1.46
SKP1-212ENST00000523966 MAP7Q14244 749 aa5.96□□□□□ -1.46
SKP1-212ENST00000523966 ADGRE1Q14246 886 aa5.96□□□□□ -1.46
SKP1-212ENST00000523966 PPP2R5EQ16537 467 aa5.96□□□□□ -1.46
SKP1-212ENST00000523966 UVSSAQ2YD98 709 aa5.96□□□□□ -1.46
SKP1-212ENST00000523966 SLC6A19Q695T7 634 aa5.96□□□□□ -1.46
SKP1-212ENST00000523966 TXNRD3Q86VQ6 643 aa5.96□□□□□ -1.46
SKP1-212ENST00000523966 C2CD4AQ8NCU7 369 aaPredicted RBP5.96□□□□□ -1.46
SKP1-212ENST00000523966 UTP4Q969X6 686 aaKnown RBP5.96□□□□□ -1.46
SKP1-212ENST00000523966 KCNF1Q9H3M0 494 aa5.96□□□□□ -1.46
SKP1-212ENST00000523966 ZNF408Q9H9D4 720 aa5.96□□□□□ -1.46
SKP1-212ENST00000523966 GMIPQ9P107 970 aa5.96□□□□□ -1.46
SKP1-212ENST00000523966 PRKAG3Q9UGI9 489 aa5.96□□□□□ -1.46
SKP1-212ENST00000523966 ACTL7BQ9Y614 415 aa5.96□□□□□ -1.46
SKP1-212ENST00000523966 RAG1P15918 1043 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 ETFBP38117 255 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 PREPP48147 710 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 GIPRP48546 466 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 RING1Q06587 406 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 RBL2Q08999 1139 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 MBTPS1Q14703 1052 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 TMEM201Q5SNT2 666 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 ANKS3Q6ZW76 656 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 PHACTR4Q8IZ21 702 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 RBBP8NLQ8NC74 664 aaPredicted RBP5.95□□□□□ -1.46
SKP1-212ENST00000523966 TMEM40Q8WWA1 233 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 SHDQ96IW2 340 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 TM9SF2Q99805 663 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 FAM105AQ9NUU6 356 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 DAGLAQ9Y4D2 1042 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 SLC12A7Q9Y666 1083 aa5.95□□□□□ -1.46
SKP1-212ENST00000523966 SLC22A31A6NKX4 558 aa5.94□□□□□ -1.46
SKP1-212ENST00000523966 DHX15O43143 795 aaKnown RBP5.94□□□□□ -1.46
SKP1-212ENST00000523966 BMP3P12645 472 aa5.94□□□□□ -1.46
SKP1-212ENST00000523966 NFKBIBQ15653 356 aa5.94□□□□□ -1.46
SKP1-212ENST00000523966 ARSHQ5FYA8 562 aa5.94□□□□□ -1.46
SKP1-212ENST00000523966 PAOXQ6QHF9 649 aa5.94□□□□□ -1.46
SKP1-212ENST00000523966 MCATQ8IVS2 390 aaKnown RBP5.94□□□□□ -1.46
SKP1-212ENST00000523966 GIMAP7Q8NHV1 300 aa5.94□□□□□ -1.46
SKP1-212ENST00000523966 ISL2Q96A47 359 aa5.94□□□□□ -1.46
SKP1-212ENST00000523966 TMEM87BQ96K49 555 aa5.94□□□□□ -1.46
SKP1-212ENST00000523966 UBL7Q96S82 380 aaPredicted RBP5.94□□□□□ -1.46
SKP1-212ENST00000523966 GSX1Q9H4S2 264 aaPredicted RBP5.94□□□□□ -1.46
SKP1-212ENST00000523966 SMAD7O15105 426 aaKnown RBP5.93□□□□□ -1.46
SKP1-212ENST00000523966 MAP4P27816 1152 aaKnown RBP5.93□□□□□ -1.46
SKP1-212ENST00000523966 GBP1P32455 592 aa5.93□□□□□ -1.46
SKP1-212ENST00000523966 NBPF6Q5VWK0 638 aa5.93□□□□□ -1.46
SKP1-212ENST00000523966 Q6ZS46 218 aa5.93□□□□□ -1.46
SKP1-212ENST00000523966 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.93□□□□□ -1.46
SKP1-212ENST00000523966 NLRC3Q7RTR2 1065 aa5.93□□□□□ -1.46
SKP1-212ENST00000523966 LSRQ86X29 649 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms