RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 INHAP05111 366 aa18.33■□□□□ 0.52
PRKDC-204ENST00000521331 ELNP15502 786 aa18.33■□□□□ 0.52
PRKDC-204ENST00000521331 PABPC4Q13310 644 aaKnown RBP eCLIP18.33■□□□□ 0.52
PRKDC-204ENST00000521331 TREML2Q5T2D2 321 aa18.33■□□□□ 0.52
PRKDC-204ENST00000521331 PI16Q6UXB8 463 aa18.33■□□□□ 0.52
PRKDC-204ENST00000521331 TBC1D9Q6ZT07 1266 aa18.33■□□□□ 0.52
PRKDC-204ENST00000521331 CCDC84Q86UT8 332 aaPredicted RBP18.33■□□□□ 0.52
PRKDC-204ENST00000521331 TEX11Q8IYF3 940 aa18.33■□□□□ 0.52
PRKDC-204ENST00000521331 ANKRD13CQ8N6S4 541 aa18.33■□□□□ 0.52
PRKDC-204ENST00000521331 ZNF280CQ8ND82 737 aa18.33■□□□□ 0.52
PRKDC-204ENST00000521331 HERC5Q9UII4 1024 aaKnown RBP18.33■□□□□ 0.52
PRKDC-204ENST00000521331 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.33■□□□□ 0.52
PRKDC-204ENST00000521331 DOCK1Q14185 1865 aa18.33■□□□□ 0.52
PRKDC-204ENST00000521331 FAM196BA6NMK8 535 aa18.32■□□□□ 0.52
PRKDC-204ENST00000521331 TRIM27P14373 513 aa18.32■□□□□ 0.52
PRKDC-204ENST00000521331 CAP2P40123 477 aa18.32■□□□□ 0.52
PRKDC-204ENST00000521331 GCLCP48506 637 aaPredicted RBP18.32■□□□□ 0.52
PRKDC-204ENST00000521331 SPP2Q13103 211 aa18.32■□□□□ 0.52
PRKDC-204ENST00000521331 ATF7IPQ6VMQ6 1270 aa18.32■□□□□ 0.52
PRKDC-204ENST00000521331 PIAS4Q8N2W9 510 aaPredicted RBP18.32■□□□□ 0.52
PRKDC-204ENST00000521331 NOL10Q9BSC4 688 aaKnown RBP18.32■□□□□ 0.52
PRKDC-204ENST00000521331 LRP2BPQ9P2M1 347 aa18.32■□□□□ 0.52
PRKDC-204ENST00000521331 USP17L5A8MUK1 530 aa18.31■□□□□ 0.52
PRKDC-204ENST00000521331 CCER2I3L3R5 266 aa18.31■□□□□ 0.52
PRKDC-204ENST00000521331 MCAMP43121 646 aa18.31■□□□□ 0.52
PRKDC-204ENST00000521331 AS3MTQ9HBK9 375 aa18.31■□□□□ 0.52
PRKDC-204ENST00000521331 PNMA6EA0A0J9YXQ4 647 aa18.3■□□□□ 0.52
PRKDC-204ENST00000521331 BAG3O95817 575 aa18.3■□□□□ 0.52
PRKDC-204ENST00000521331 TFRCP02786 760 aaKnown RBP18.3■□□□□ 0.52
PRKDC-204ENST00000521331 PLCG2P16885 1265 aa18.3■□□□□ 0.52
PRKDC-204ENST00000521331 HMGCS2P54868 508 aa18.3■□□□□ 0.52
PRKDC-204ENST00000521331 DEFB118Q96PH6 123 aa18.3■□□□□ 0.52
PRKDC-204ENST00000521331 DHX36Q9H2U1 1008 aaKnown RBP18.3■□□□□ 0.52
PRKDC-204ENST00000521331 PAK6Q9NQU5 681 aaPredicted RBP18.3■□□□□ 0.52
PRKDC-204ENST00000521331 RBM27Q9P2N5 1060 aaKnown RBP18.3■□□□□ 0.52
PRKDC-204ENST00000521331 PI4KBQ9UBF8 816 aa18.3■□□□□ 0.52
PRKDC-204ENST00000521331 TAOK2Q9UL54 1235 aa18.3■□□□□ 0.52
PRKDC-204ENST00000521331 SH3D19Q5HYK7 790 aa18.29■□□□□ 0.52
PRKDC-204ENST00000521331 FRAT1Q92837 279 aaPredicted RBP18.29■□□□□ 0.52
PRKDC-204ENST00000521331 GPR108Q9NPR9 543 aa18.29■□□□□ 0.52
PRKDC-204ENST00000521331 PTPRFP10586 1907 aa18.28■□□□□ 0.52
PRKDC-204ENST00000521331 ZBTB7BO15156 539 aaPredicted RBP18.28■□□□□ 0.52
PRKDC-204ENST00000521331 IGSF3O75054 1194 aa18.28■□□□□ 0.52
PRKDC-204ENST00000521331 CCDC158Q5M9N0 1113 aa18.28■□□□□ 0.52
PRKDC-204ENST00000521331 TTC39AQ5SRH9 613 aa18.28■□□□□ 0.52
PRKDC-204ENST00000521331 NAA16Q6N069 864 aaPredicted RBP18.28■□□□□ 0.52
PRKDC-204ENST00000521331 SH3RF3Q8TEJ3 882 aaPredicted RBP18.28■□□□□ 0.52
PRKDC-204ENST00000521331 ASCC2Q9H1I8 757 aaPredicted RBP18.28■□□□□ 0.52
PRKDC-204ENST00000521331 MGAMO43451 1857 aa18.28■□□□□ 0.52
PRKDC-204ENST00000521331 PHIPQ8WWQ0 1821 aa18.28■□□□□ 0.52
PRKDC-204ENST00000521331 ASNSP08243 561 aa18.27■□□□□ 0.52
PRKDC-204ENST00000521331 RRP1BQ14684 758 aaKnown RBP18.27■□□□□ 0.52
PRKDC-204ENST00000521331 CLUAP1Q96AJ1 413 aa18.27■□□□□ 0.52
PRKDC-204ENST00000521331 WDR18Q9BV38 432 aa18.27■□□□□ 0.52
PRKDC-204ENST00000521331 CRISPLD2Q9H0B8 497 aa18.27■□□□□ 0.52
PRKDC-204ENST00000521331 PRO3102Q9H379 93 aa18.27■□□□□ 0.52
PRKDC-204ENST00000521331 GINM1Q9NU53 330 aa18.27■□□□□ 0.52
PRKDC-204ENST00000521331 RANBP2P49792 3224 aaKnown RBP18.27■□□□□ 0.52
PRKDC-204ENST00000521331 EVI5O60447 810 aa18.26■□□□□ 0.51
PRKDC-204ENST00000521331 BCAR3O75815 825 aa18.26■□□□□ 0.51
PRKDC-204ENST00000521331 HMGCRP04035 888 aa18.26■□□□□ 0.51
PRKDC-204ENST00000521331 PPP4CP60510 307 aa18.26■□□□□ 0.51
PRKDC-204ENST00000521331 TNNI3KQ59H18 835 aa18.26■□□□□ 0.51
PRKDC-204ENST00000521331 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.26■□□□□ 0.51
PRKDC-204ENST00000521331 AATFQ9NY61 560 aaKnown RBP eCLIP18.26■□□□□ 0.51
PRKDC-204ENST00000521331 FPGT-TNNI3KV9GXZ4 949 aa18.26■□□□□ 0.51
PRKDC-204ENST00000521331 A0A1W2PPC1 479 aa18.25■□□□□ 0.51
PRKDC-204ENST00000521331 BACE1P56817 501 aa18.25■□□□□ 0.51
PRKDC-204ENST00000521331 IRX3P78415 501 aaPredicted RBP18.25■□□□□ 0.51
PRKDC-204ENST00000521331 OS9Q13438 667 aaPredicted RBP18.25■□□□□ 0.51
PRKDC-204ENST00000521331 POLA2Q14181 598 aa18.25■□□□□ 0.51
PRKDC-204ENST00000521331 METTL16Q86W50 562 aaKnown RBP18.25■□□□□ 0.51
PRKDC-204ENST00000521331 FOXP4Q8IVH2 680 aaPredicted RBP18.25■□□□□ 0.51
PRKDC-204ENST00000521331 ZNF512BQ96KM6 892 aaPredicted RBP18.25■□□□□ 0.51
PRKDC-204ENST00000521331 TRIM34Q9BYJ4 488 aa18.25■□□□□ 0.51
PRKDC-204ENST00000521331 SNRKQ9NRH2 765 aa18.25■□□□□ 0.51
PRKDC-204ENST00000521331 TMOD4Q9NZQ9 345 aa18.25■□□□□ 0.51
PRKDC-204ENST00000521331 MORF4L1Q9UBU8 362 aa18.25■□□□□ 0.51
PRKDC-204ENST00000521331 GJD2Q9UKL4 321 aa18.25■□□□□ 0.51
PRKDC-204ENST00000521331 TNNQ9UQP3 1299 aa18.25■□□□□ 0.51
PRKDC-204ENST00000521331 HOXA7P31268 230 aaPredicted RBP18.24■□□□□ 0.51
PRKDC-204ENST00000521331 MTMR2Q13614 643 aa18.24■□□□□ 0.51
PRKDC-204ENST00000521331 ZKSCAN2Q63HK3 967 aa18.24■□□□□ 0.51
PRKDC-204ENST00000521331 NECAB2Q7Z6G3 386 aa18.24■□□□□ 0.51
PRKDC-204ENST00000521331 MAPKAPK5Q8IW41 473 aa18.24■□□□□ 0.51
PRKDC-204ENST00000521331 CRACR2BQ8N4Y2 399 aaPredicted RBP18.24■□□□□ 0.51
PRKDC-204ENST00000521331 TMEM57Q8N5G2 664 aa18.24■□□□□ 0.51
PRKDC-204ENST00000521331 ANKLE1Q8NAG6 615 aa18.24■□□□□ 0.51
PRKDC-204ENST00000521331 TGFBRAP1Q8WUH2 860 aa18.24■□□□□ 0.51
PRKDC-204ENST00000521331 DBNDD2Q9BQY9 259 aa18.24■□□□□ 0.51
PRKDC-204ENST00000521331 LOC285556D6RIA3 1793 aa18.24■□□□□ 0.51
PRKDC-204ENST00000521331 FLT1P17948 1338 aa18.23■□□□□ 0.51
PRKDC-204ENST00000521331 C19orf81C9J6K1 198 aa18.23■□□□□ 0.51
PRKDC-204ENST00000521331 CYP2E1P05181 493 aaPredicted RBP18.23■□□□□ 0.51
PRKDC-204ENST00000521331 SSH3Q8TE77 659 aa18.23■□□□□ 0.51
PRKDC-204ENST00000521331 PAWRQ96IZ0 340 aaKnown RBP18.23■□□□□ 0.51
PRKDC-204ENST00000521331 SZT2Q5T011 3432 aa18.23■□□□□ 0.51
PRKDC-204ENST00000521331 RPTORQ8N122 1335 aa18.23■□□□□ 0.51
PRKDC-204ENST00000521331 USP17L10C9JJH3 530 aa18.22■□□□□ 0.51
PRKDC-204ENST00000521331 HLA-DOAP06340 250 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms