RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 PTPRAP18433 802 aa8.15□□□□□ -1.1
CTNNA1-214ENST00000519116 TCP10Q12799 353 aa8.15□□□□□ -1.1
CTNNA1-214ENST00000519116 EPHA10Q5JZY3 1008 aa8.15□□□□□ -1.1
CTNNA1-214ENST00000519116 ZNF697Q5TEC3 545 aa8.15□□□□□ -1.1
CTNNA1-214ENST00000519116 ANKRD13CQ8N6S4 541 aa8.15□□□□□ -1.1
CTNNA1-214ENST00000519116 SYMPKQ92797 1274 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-214ENST00000519116 TSR2Q969E8 191 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-214ENST00000519116 ZSWIM6Q9HCJ5 1215 aa8.15□□□□□ -1.1
CTNNA1-214ENST00000519116 PNMA3Q9UL41 463 aa8.15□□□□□ -1.1
CTNNA1-214ENST00000519116 AGTPBP1Q9UPW5 1226 aa8.15□□□□□ -1.1
CTNNA1-214ENST00000519116 AFG3L2Q9Y4W6 797 aa8.15□□□□□ -1.1
CTNNA1-214ENST00000519116 PHF20L1A8MW92 1017 aa8.14□□□□□ -1.11
CTNNA1-214ENST00000519116 MDM2Q00987 491 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-214ENST00000519116 NFIAQ12857 509 aa8.14□□□□□ -1.11
CTNNA1-214ENST00000519116 METTL24Q5JXM2 366 aa8.14□□□□□ -1.11
CTNNA1-214ENST00000519116 BEND3Q5T5X7 828 aa8.14□□□□□ -1.11
CTNNA1-214ENST00000519116 CDC42EP5Q6NZY7 148 aa8.14□□□□□ -1.11
CTNNA1-214ENST00000519116 WDR66Q8TBY9 1149 aa8.14□□□□□ -1.11
CTNNA1-214ENST00000519116 LBHD1Q9BQE6 289 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-214ENST00000519116 PUS3Q9BZE2 481 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-214ENST00000519116 ZSWIM8A7E2V4 1837 aa8.14□□□□□ -1.11
CTNNA1-214ENST00000519116 PFASO15067 1338 aa8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 KIF16BQ96L93 1317 aa8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 ZEB1P37275 1124 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 GCLCP48506 637 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 PABPC4Q13310 644 aaKnown RBP eCLIP8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 VARS2Q5ST30 1063 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 MAP3K21Q5TCX8 1036 aa8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 MAFAQ8NHW3 353 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 FAM161BQ96MY7 647 aa8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 C9orf78Q9NZ63 289 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 FAM198AQ9UFP1 575 aa8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 GJD2Q9UKL4 321 aa8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 DAGLAQ9Y4D2 1042 aa8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 LRRFIP2Q9Y608 721 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 VCANP13611 3396 aa8.13□□□□□ -1.11
CTNNA1-214ENST00000519116 TRIM75PA6NK02 468 aa8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 F6X3S4 739 aa8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 CTNND1O60716 968 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 PDE8BO95263 885 aa8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 IFIT1P09914 478 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 COL6A1P12109 1028 aa8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 COL9A1P20849 921 aa8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 MAP3K10Q02779 954 aa8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 TRIM32Q13049 653 aa8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 LRRC26Q2I0M4 334 aa8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 TRMT44Q8IYL2 757 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 PROCA1Q8NCQ7 364 aaPredicted RBP8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 CDX2Q99626 313 aaPredicted RBP8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 MFRPQ9BY79 579 aa8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 USP40Q9NVE5 1235 aa8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 ECM29Q5VYK3 1845 aa8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 ARAP2Q8WZ64 1704 aa8.12□□□□□ -1.11
CTNNA1-214ENST00000519116 ATRNL1Q5VV63 1379 aa8.11□□□□□ -1.11
CTNNA1-214ENST00000519116 ENTPD3O75355 529 aa8.11□□□□□ -1.11
CTNNA1-214ENST00000519116 ALDH1L1O75891 902 aa8.11□□□□□ -1.11
CTNNA1-214ENST00000519116 XRCC5P13010 732 aaKnown RBP8.11□□□□□ -1.11
CTNNA1-214ENST00000519116 PUM3Q15397 648 aaKnown RBP8.11□□□□□ -1.11
CTNNA1-214ENST00000519116 DIXDC1Q155Q3 683 aa8.11□□□□□ -1.11
CTNNA1-214ENST00000519116 TREML2Q5T2D2 321 aa8.11□□□□□ -1.11
CTNNA1-214ENST00000519116 ZFPM1Q8IX07 1006 aa8.11□□□□□ -1.11
CTNNA1-214ENST00000519116 VGLL2Q8N8G2 317 aa8.11□□□□□ -1.11
CTNNA1-214ENST00000519116 SOCS4Q8WXH5 440 aa8.11□□□□□ -1.11
CTNNA1-214ENST00000519116 TRIB2Q92519 343 aa8.11□□□□□ -1.11
CTNNA1-214ENST00000519116 IDI2Q9BXS1 227 aa8.11□□□□□ -1.11
CTNNA1-214ENST00000519116 SEMA6BQ9H3T3 888 aa8.11□□□□□ -1.11
CTNNA1-214ENST00000519116 SPTBN5Q9NRC6 3674 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 SPEF2Q9C093 1822 aa8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 IL16Q14005 1332 aa8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 LDHBP07195 334 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 ZKSCAN1P17029 563 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 CYP2B6P20813 491 aa8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 RGS3P49796 1198 aa8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 CCDC27Q2M243 656 aa8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 LRRC24Q50LG9 513 aa8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 ZSCAN29Q8IWY8 852 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 SUCLG2Q96I99 432 aa8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 NUDT12Q9BQG2 462 aa8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 TBC1D2Q9BYX2 928 aa8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 PRKAG2Q9UGJ0 569 aa8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 COL2A1P02458 1487 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-214ENST00000519116 VAMP4O75379 141 aa8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 SLC5A1P13866 664 aa8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 FOSL2P15408 326 aa8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 FGFR2P21802 821 aa8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 PRDX5P30044 214 aa8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 PDE3AQ14432 1141 aa8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 RABL6Q3YEC7 729 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 TJAP1Q5JTD0 557 aa8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 WWC1Q8IX03 1113 aa8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 ZNF687Q8N1G0 1237 aa8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 ZNF280CQ8ND82 737 aa8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 LPIN2Q92539 896 aa8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 KAZALD1Q96I82 304 aa8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 SRCIN1Q9C0H9 1055 aa8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 ASCC2Q9H1I8 757 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 MORF4L1Q9UBU8 362 aa8.09□□□□□ -1.11
CTNNA1-214ENST00000519116 MYH3P11055 1940 aa8.08□□□□□ -1.12
CTNNA1-214ENST00000519116 TNFRSF10AO00220 468 aa8.08□□□□□ -1.12
CTNNA1-214ENST00000519116 TBC1D12O60347 775 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms