RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 VGLL2Q8N8G2 317 aa12.35□□□□□ -0.43
SH2D4A-202ENST00000518040 TRIB2Q92519 343 aa12.35□□□□□ -0.43
SH2D4A-202ENST00000518040 SPTBN5Q9NRC6 3674 aaKnown RBP12.35□□□□□ -0.43
SH2D4A-202ENST00000518040 DOCK2Q92608 1830 aa12.35□□□□□ -0.43
SH2D4A-202ENST00000518040 F6X3S4 739 aa12.35□□□□□ -0.43
SH2D4A-202ENST00000518040 TRIM32Q13049 653 aa12.35□□□□□ -0.43
SH2D4A-202ENST00000518040 LRRC26Q2I0M4 334 aa12.35□□□□□ -0.43
SH2D4A-202ENST00000518040 ZSCAN29Q8IWY8 852 aaPredicted RBP12.35□□□□□ -0.43
SH2D4A-202ENST00000518040 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
SH2D4A-202ENST00000518040 NUDT12Q9BQG2 462 aa12.35□□□□□ -0.43
SH2D4A-202ENST00000518040 SEMA6BQ9H3T3 888 aa12.35□□□□□ -0.43
SH2D4A-202ENST00000518040 DOCK1Q14185 1865 aa12.34□□□□□ -0.43
SH2D4A-202ENST00000518040 LDHBP07195 334 aaKnown RBP12.34□□□□□ -0.43
SH2D4A-202ENST00000518040 DIXDC1Q155Q3 683 aa12.34□□□□□ -0.43
SH2D4A-202ENST00000518040 TREML2Q5T2D2 321 aa12.34□□□□□ -0.43
SH2D4A-202ENST00000518040 MORF4L1Q9UBU8 362 aa12.34□□□□□ -0.43
SH2D4A-202ENST00000518040 TNFRSF10AO00220 468 aa12.33□□□□□ -0.44
SH2D4A-202ENST00000518040 SLC5A1P13866 664 aa12.33□□□□□ -0.44
SH2D4A-202ENST00000518040 ZKSCAN1P17029 563 aaPredicted RBP12.33□□□□□ -0.44
SH2D4A-202ENST00000518040 CYP2B6P20813 491 aa12.33□□□□□ -0.44
SH2D4A-202ENST00000518040 RGS3P49796 1198 aa12.33□□□□□ -0.44
SH2D4A-202ENST00000518040 PDE3AQ14432 1141 aa12.33□□□□□ -0.44
SH2D4A-202ENST00000518040 MS4A3Q96HJ5 214 aa12.33□□□□□ -0.44
SH2D4A-202ENST00000518040 SRCIN1Q9C0H9 1055 aa12.33□□□□□ -0.44
SH2D4A-202ENST00000518040 TMEM265A0A087WTH1 108 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 TBC1D12O60347 775 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 FGFR2P21802 821 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 SMAD3P84022 425 aaKnown RBP12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 RABL6Q3YEC7 729 aaPredicted RBP12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 LRRC24Q50LG9 513 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 TJAP1Q5JTD0 557 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 ZFPM1Q8IX07 1006 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 SLF2Q8IX21 1173 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 ZGPATQ8N5A5 531 aaKnown RBP12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 ZNF280CQ8ND82 737 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 LPIN2Q92539 896 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 SUCLG2Q96I99 432 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 OSBPL5Q9H0X9 879 aaPredicted RBP12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 GNL3LQ9NVN8 582 aaKnown RBP12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 PHIPQ8WWQ0 1821 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 SALL1Q9NSC2 1324 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 MYH13Q9UKX3 1938 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 VAMP4O75379 141 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 FOSL2P15408 326 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 MAPK4P31152 587 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 WWC1Q8IX03 1113 aa12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 ASCC2Q9H1I8 757 aaPredicted RBP12.32□□□□□ -0.44
SH2D4A-202ENST00000518040 MSCO60682 206 aa12.31□□□□□ -0.44
SH2D4A-202ENST00000518040 PRDX5P30044 214 aa12.31□□□□□ -0.44
SH2D4A-202ENST00000518040 CACNB2Q08289 660 aaPredicted RBP12.31□□□□□ -0.44
SH2D4A-202ENST00000518040 SPP2Q13103 211 aa12.31□□□□□ -0.44
SH2D4A-202ENST00000518040 KAZALD1Q96I82 304 aa12.31□□□□□ -0.44
SH2D4A-202ENST00000518040 AS3MTQ9HBK9 375 aa12.31□□□□□ -0.44
SH2D4A-202ENST00000518040 UTYO14607 1347 aa12.31□□□□□ -0.44
SH2D4A-202ENST00000518040 LOC285556D6RIA3 1793 aa12.3□□□□□ -0.44
SH2D4A-202ENST00000518040 SEMA3EO15041 775 aa12.3□□□□□ -0.44
SH2D4A-202ENST00000518040 PLA2G5P39877 138 aa12.3□□□□□ -0.44
SH2D4A-202ENST00000518040 RGS2P41220 211 aa12.3□□□□□ -0.44
SH2D4A-202ENST00000518040 IRX3P78415 501 aaPredicted RBP12.3□□□□□ -0.44
SH2D4A-202ENST00000518040 SH3D19Q5HYK7 790 aa12.3□□□□□ -0.44
SH2D4A-202ENST00000518040 CCAR1Q8IX12 1150 aaKnown RBP12.3□□□□□ -0.44
SH2D4A-202ENST00000518040 GPRC5AQ8NFJ5 357 aa12.3□□□□□ -0.44
SH2D4A-202ENST00000518040 GTF3C2Q8WUA4 911 aaPredicted RBP12.3□□□□□ -0.44
SH2D4A-202ENST00000518040 MYLIPQ8WY64 445 aa12.3□□□□□ -0.44
SH2D4A-202ENST00000518040 SENP6Q9GZR1 1112 aaPredicted RBP12.3□□□□□ -0.44
SH2D4A-202ENST00000518040 BICC1Q9H694 974 aaKnown RBP12.3□□□□□ -0.44
SH2D4A-202ENST00000518040 DENND2AQ9ULE3 1009 aa12.3□□□□□ -0.44
SH2D4A-202ENST00000518040 RFX7Q2KHR2 1363 aa12.3□□□□□ -0.44
SH2D4A-202ENST00000518040 EYSQ5T1H1 3165 aa12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 DDTLA6NHG4 134 aaPredicted RBP12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 HMGCS2P54868 508 aa12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 SLC4A10Q6U841 1118 aa12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 SH3BP5LQ7L8J4 393 aa12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 RASEFQ8IZ41 740 aa12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 TTC28Q96AY4 2481 aa12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 FAM122AQ96E09 287 aa12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 GAKO14976 1311 aa12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 PLXNB2O15031 1838 aa12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 MAST2Q6P0Q8 1798 aa12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 NBPF7P0C2Y1 421 aaPredicted RBP12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 HOXA7P31268 230 aaPredicted RBP12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 FAM163AQ96GL9 167 aaPredicted RBP12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 APBA2Q99767 749 aa12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.29□□□□□ -0.44
SH2D4A-202ENST00000518040 FANCIQ9NVI1 1328 aa12.28□□□□□ -0.44
SH2D4A-202ENST00000518040 LAMA2P24043 3122 aaKnown RBP12.28□□□□□ -0.44
SH2D4A-202ENST00000518040 USP17L5A8MUK1 530 aa12.28□□□□□ -0.44
SH2D4A-202ENST00000518040 DNM1LO00429 736 aa12.28□□□□□ -0.44
SH2D4A-202ENST00000518040 MAP4K4O95819 1239 aaPredicted RBP12.28□□□□□ -0.44
SH2D4A-202ENST00000518040 CCND3P30281 292 aaPredicted RBP12.28□□□□□ -0.44
SH2D4A-202ENST00000518040 SHHQ15465 462 aa12.28□□□□□ -0.44
SH2D4A-202ENST00000518040 USP6NLQ92738 828 aa12.28□□□□□ -0.44
SH2D4A-202ENST00000518040 GLRX3O76003 335 aaKnown RBP12.27□□□□□ -0.45
SH2D4A-202ENST00000518040 MFSD14CQ5VZR4 134 aa12.27□□□□□ -0.45
SH2D4A-202ENST00000518040 CCDC84Q86UT8 332 aaPredicted RBP12.27□□□□□ -0.45
SH2D4A-202ENST00000518040 DZIP1Q86YF9 867 aaKnown RBP12.27□□□□□ -0.45
SH2D4A-202ENST00000518040 LPAR1Q92633 364 aa12.27□□□□□ -0.45
SH2D4A-202ENST00000518040 KIF12Q96FN5 646 aa12.27□□□□□ -0.45
SH2D4A-202ENST00000518040 TTYH1Q9H313 450 aaPredicted RBP12.27□□□□□ -0.45
SH2D4A-202ENST00000518040 TMOD4Q9NZQ9 345 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms