RNA–Protein interactions for RNA: ENST00000514455.5

RACK1-233, Transcript of receptor for activated C kinase 1, human

TSL 2 BASIC

Gene RACK1, Length 791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-233	ENST00000514455	SLC4A8	Q2Y0W8	1093 aa		11.8	□□□□□ -0.52
RACK1-233	ENST00000514455	C12orf60	Q5U649	245 aa		11.8	□□□□□ -0.52
RACK1-233	ENST00000514455	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.8	□□□□□ -0.52
RACK1-233	ENST00000514455	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.8	□□□□□ -0.52
RACK1-233	ENST00000514455	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.8	□□□□□ -0.52
RACK1-233	ENST00000514455	CDK5RAP2	Q96SN8	1893 aa		11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	COL2A1	P02458	1487 aa	Predicted RBP	11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	USP2	O75604	605 aa	Predicted RBP	11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	CYP2D6	P10635	497 aa		11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	FKBP1B	P68106	108 aa		11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	PTH1R	Q03431	593 aa		11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	ARMC9	Q7Z3E5	817 aa		11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	METTL16	Q86W50	562 aa	Known RBP	11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	TRIM34	Q9BYJ4	488 aa		11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	GBA2	Q9HCG7	927 aa	Predicted RBP	11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	CTNNA3	Q9UI47	895 aa		11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	HERC5	Q9UII4	1024 aa	Known RBP	11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	SERPINB13	Q9UIV8	391 aa		11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	ANGEL1	Q9UNK9	670 aa	Known RBP	11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	MYH1	P12882	1939 aa		11.79	□□□□□ -0.52
RACK1-233	ENST00000514455	CYP2D7	A0A087X1C5	515 aa		11.78	□□□□□ -0.52
RACK1-233	ENST00000514455	TMEM88B	A6NKF7	163 aa		11.78	□□□□□ -0.52
RACK1-233	ENST00000514455	IREB2	P48200	963 aa	Known RBP	11.78	□□□□□ -0.52
RACK1-233	ENST00000514455	APLP1	P51693	650 aa		11.78	□□□□□ -0.52
RACK1-233	ENST00000514455	MOB2	Q70IA6	237 aa		11.78	□□□□□ -0.52
RACK1-233	ENST00000514455	MAP4K1	Q92918	833 aa		11.78	□□□□□ -0.52
RACK1-233	ENST00000514455	KLRG1	Q96E93	195 aa		11.78	□□□□□ -0.52
RACK1-233	ENST00000514455	ZNF341	Q9BYN7	854 aa		11.78	□□□□□ -0.52
RACK1-233	ENST00000514455	EHD4	Q9H223	541 aa		11.78	□□□□□ -0.52
RACK1-233	ENST00000514455	ANO2	Q9NQ90	1003 aa		11.78	□□□□□ -0.52
RACK1-233	ENST00000514455	FZD1	Q9UP38	647 aa		11.78	□□□□□ -0.52
RACK1-233	ENST00000514455	FOCAD	Q5VW36	1801 aa		11.78	□□□□□ -0.52
RACK1-233	ENST00000514455	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.78	□□□□□ -0.52
RACK1-233	ENST00000514455	PHF20L1	A8MW92	1017 aa		11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	UBE2Q2L	H0YL09	131 aa		11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	EIF5B	O60841	1220 aa	Known RBP	11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	REC8	O95072	547 aa		11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	SLC3A2	P08195	630 aa	Known RBP	11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	SLURP2	P0DP57	97 aa		11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	C1QTNF8	P60827	252 aa		11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	MAP3K9	P80192	1104 aa		11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	EVX2	Q03828	476 aa		11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	GABPA	Q06546	454 aa		11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	PPARA	Q07869	468 aa		11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	MAP3K11	Q16584	847 aa		11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	DYNLL2	Q96FJ2	89 aa		11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	LSG1	Q9H089	658 aa	Known RBP	11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	ZNF112	Q9UJU3	913 aa		11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	TAOK2	Q9UL54	1235 aa		11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	ZMYM6	O95789	1325 aa		11.77	□□□□□ -0.53
RACK1-233	ENST00000514455	TRPM7	Q96QT4	1865 aa		11.76	□□□□□ -0.53
RACK1-233	ENST00000514455	UNCX	A6NJT0	531 aa		11.76	□□□□□ -0.53
RACK1-233	ENST00000514455	FAM196B	A6NMK8	535 aa		11.76	□□□□□ -0.53
RACK1-233	ENST00000514455	SMIM22	K7EJ46	135 aa		11.76	□□□□□ -0.53
RACK1-233	ENST00000514455	ZNF213	O14771	459 aa		11.76	□□□□□ -0.53
RACK1-233	ENST00000514455	CTNND1	O60716	968 aa	Known RBP	11.76	□□□□□ -0.53
RACK1-233	ENST00000514455	CDK8	P49336	464 aa		11.76	□□□□□ -0.53
RACK1-233	ENST00000514455	IMMT	Q16891	758 aa	Known RBP	11.76	□□□□□ -0.53
RACK1-233	ENST00000514455	C16orf86	Q6ZW13	317 aa		11.76	□□□□□ -0.53
RACK1-233	ENST00000514455	STK11IP	Q8N1F8	1099 aa		11.76	□□□□□ -0.53
RACK1-233	ENST00000514455	WRNIP1	Q96S55	665 aa		11.76	□□□□□ -0.53
RACK1-233	ENST00000514455	ZNF287	Q9HBT7	754 aa		11.76	□□□□□ -0.53
RACK1-233	ENST00000514455	SWAP70	Q9UH65	585 aa		11.76	□□□□□ -0.53
RACK1-233	ENST00000514455	ANAPC4	Q9UJX5	808 aa		11.76	□□□□□ -0.53
RACK1-233	ENST00000514455	INPP5B	P32019	993 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	HUNK	P57058	714 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	HAND2	P61296	217 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	CTDSPL2	Q05D32	466 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	PDE4B	Q07343	736 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	CERKL	Q49MI3	558 aa	Predicted RBP	11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	LDLRAD1	Q5T700	205 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	TATDN1	Q6P1N9	297 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	SAPCD2	Q86UD0	394 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	ANKRD13A	Q8IZ07	590 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	SLC10A4	Q96EP9	437 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	DNAJC18	Q9H819	358 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	MKNK2	Q9HBH9	465 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	CREBZF	Q9NS37	354 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	ABT1	Q9ULW3	272 aa	Known RBP	11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	RBM8A	Q9Y5S9	174 aa	Known RBP	11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	TLL2	Q9Y6L7	1015 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	SSC5D	A1L4H1	1573 aa		11.75	□□□□□ -0.53
RACK1-233	ENST00000514455	NAV1	Q8NEY1	1877 aa		11.74	□□□□□ -0.53
RACK1-233	ENST00000514455	SHMT1	P34896	483 aa		11.74	□□□□□ -0.53
RACK1-233	ENST00000514455	CAP2	P40123	477 aa		11.74	□□□□□ -0.53
RACK1-233	ENST00000514455	NECTIN1	Q15223	517 aa		11.74	□□□□□ -0.53
RACK1-233	ENST00000514455	MFSD6	Q6ZSS7	791 aa		11.74	□□□□□ -0.53
RACK1-233	ENST00000514455	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.74	□□□□□ -0.53
RACK1-233	ENST00000514455	SLC44A5	Q8NCS7	719 aa		11.74	□□□□□ -0.53
RACK1-233	ENST00000514455	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.74	□□□□□ -0.53
RACK1-233	ENST00000514455	CCDC17	Q96LX7	622 aa		11.74	□□□□□ -0.53
RACK1-233	ENST00000514455	INCENP	Q9NQS7	918 aa		11.74	□□□□□ -0.53
RACK1-233	ENST00000514455	CSAD	Q9Y600	493 aa		11.74	□□□□□ -0.53
RACK1-233	ENST00000514455	EPB41L2	O43491	1005 aa	Known RBP	11.73	□□□□□ -0.53
RACK1-233	ENST00000514455	CYP21A2	P08686	494 aa		11.73	□□□□□ -0.53
RACK1-233	ENST00000514455	FGR	P09769	529 aa		11.73	□□□□□ -0.53
RACK1-233	ENST00000514455	RRP1B	Q14684	758 aa	Known RBP	11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms